Refactoring of ocular glands, incorporation of new CARO classes, and various improvements in reproductive, skeletal and integumental branches

Summary

This release sees improvements in the representation of the so-called ocular glands. These have previously been the subject of confusion, especially distinction between Harderian and nictitans glands (both of which are associated with the nictitating membrane). Uberon previously followed the BTO scheme of classifying the Harderian as a lacrimal gland - this has been modified, and the two are now disjoint (although they most likely share a common phylogenetic origin). We also made general improvements to the lacrimal system (pictured). The Mammalian Phenotype (MP) ontology developers did most of the groundwork here (but note the representation in Uberon works for all tetrapods in which these glands are present).

Various new requests for new neuroanatomical classes or synonyms prompted a review of cell layers, and improvement on the CUMBO definition, and alignment with the cell layer category from Neurolex. Integration with Allen atlases is ongoing. The next release will see a switch to a new ID scheme.

The NSF Phenotype RCN sponsored a meeting to create a new version of CARO. Some classes from the pre-release have been incorporated in. More details coming soon.

The Phenoscape project added multiple new classes in the skeletal system.

Ontology Diff Report

• reproductive system
  • endometrium refactor
  • Fixes to ovarian follicle, subtypes and layers.
  • NT: mesentery of ileum
  • NT: placenta blood vessel
  • NT: reproductive system fluid/secretion.
• development
  • Using anlage/field as genus for all developmental fields
  • NT: lung field
  • additional classes and synonyms to align with GO development hierarchy
• neuro
  • NTs for nlx cell layers
  • updating NIFSTD/nlx xrefs and metadata, rewiring away from broken pages to replacements
  • Requests from Russ Poldrack and Trish Whetzel
    • synonyms: issue 621 issue 622 issue 623 issue 624 issue 625 issue 626 issue 627
    • NT: posterior cingulate cortex. Fixes issue 626
    • Removed incorrect NIFSTD derived UMLS ID for medial orbital frontal cortex. issue 627
    • NT: medial orbital frontal cortex. Issue issue 627
    • tidying of multi-cell-component part structure and NS laminae in anticipation of issue 620
  • pineal recess. MGI:cs. Fixes issue 613
  • multiple Allen xref related commits and NTs
• ocular glands issue 614
  • lacrimal, harderian and nictitans glands changes
  • medial ocular gland additions based on ISBN:1118473523 and comments from Cindy and Ann.
  • NT tear film
  • Adopting Siskai scheme for classification based on composition of flid
  • Using PMID:7559104.
• CARO/upper
  • NT: integumental surface. Issue issue 617
  • NT: morphological boundary (CARO)
  • NT: anatomical boundary (CARO)
  • Added notes to organ. See https://github.com/obophenotype/caro/issues/4
  • Added notes on possible obsoletion of anatomical cluster - See https://github.com/obophenotype/caro/issues/3
  • changing lung alveolar systems to be system parts
  • Added note that anatomical group may be obsoleted. See https://github.com/obophenotype/caro/issues/2
• integument
  • minor changes to hair
  • NT: integumental system gland. Fixes issue 612
  • skin gland syns
• External AOs
  • FMA alignment. Capitalizing liberkuhn
  • mp alignment; lacrimal X
  • additional alignment. Issue issue 609
  • Aligning syns with xao, zfa, bto, fma, ma
  • Sourcing defs from MP
  • minor changes to arthro-specific classes
• Skeletal system and ext
  • reclassifying ceratobranchials II-IV as ceratobranchial series
  • reclassifying astragulaus-calcaneum unit as subdivision of skeleton
  • reclassifying pit organ as a organ
  • reclassifying os basale as a bone
  • Added parasymphysial plate, lateral parasymphysial foramen, mesial parasymphysial foramen, anterior supraorbital. PHENOSCAPE:ad
  • added median postrostral bone, postrostral bone, fronto-ethmoidal shield and shagreen tooth field. PHENOSCAPE:ad
  • added coronoid fang, posterior coronoid bone and anterior coronoid bone. PHENOSCAPE:ad
  • added posterior stalk and posterior stem of interclavicle as exact synonyms for parasternal procress. Added the terms pre and post coronoid bone. PHENOSCAPE:ad
• Other
  • NT: precordium. Fixes issue 611

Original Ontology

• IRI: http://purl.obolibrary.org/obo/uberon.owl
• VersionIRI: http://purl.obolibrary.org/obo/uberon/releases/2014-11-01/uberon.owl

New Ontology

• IRI: http://purl.obolibrary.org/obo/uberon.owl
• VersionIRI: http://purl.obolibrary.org/obo/uberon/releases/2014-12-09/uberon.owl

Report for classes

Class objects lost from source: 0

Class objects new in target: 128

New Class : outer layer of endometrium

• outer layer of endometrium has exact synonym functional layer of endometrium { database cross reference=FMA:86493 }
• outer layer of endometrium has exact synonym stratum functionalis of endometrium { database cross reference=FMA:86493 }
• outer layer of endometrium definition The layer of endometrial epithelium adjacent to the myometrium. { database cross reference=Histology }
• outer layer of endometrium EquivalentTo endometrium epithelium and adjacent to some myometrium
• outer layer of endometrium database cross reference FMA:86493
• outer layer of endometrium SubClassOf adjacent to some myometrium
• outer layer of endometrium id UBERON:0022356
• outer layer of endometrium has obo namespace uberon
• outer layer of endometrium SubClassOf endometrium epithelium
• outer layer of endometrium label outer layer of endometrium

New Class : basal layer of endometrium

• basal layer of endometrium EquivalentTo endometrium epithelium and adjacent to some uterine lumen
• basal layer of endometrium id UBERON:0022355
• basal layer of endometrium has obo namespace uberon
• basal layer of endometrium label basal layer of endometrium
• basal layer of endometrium has exact synonym pars basalis of endometrium
• basal layer of endometrium definition The layer of endometrial epithelium adjacent to the uterine cavity. { database cross reference=Histology }
• basal layer of endometrium has exact synonym stratum basalis of endometrium { database cross reference=FMA:86492 }
• basal layer of endometrium SubClassOf adjacent to some uterine lumen
• basal layer of endometrium SubClassOf endometrium epithelium
• basal layer of endometrium database cross reference FMA:86492

New Class : posterior cingulate cortex

• posterior cingulate cortex database cross reference http://en.wikipedia.org/wiki/Posterior_cingulate
• posterior cingulate cortex definition Component of the cingulate cortex. The rostral and caudal extent were the caudal anterior and the isthmus divisions of the cingulate cortex respectively. The medial and lateral boundaries were the corpus callosum and as the superior frontal gyrus and/or paracentral lobule respectively (Christine Fennema-Notestine). { database cross reference=NIF_GrossAnatomy:birnlex_950 }
• posterior cingulate cortex SubClassOf part of some cingulate cortex
• posterior cingulate cortex comment Editor notes: check relationship to gyrus. See https://github.com/obophenotype/uberon/issues/626
• posterior cingulate cortex id UBERON:0022353
• posterior cingulate cortex has broad synonym posterior cingulate { database cross reference=http://en.wikipedia.org/wiki/Posterior_cingulate }
• posterior cingulate cortex has obo namespace uberon
• posterior cingulate cortex has related synonym cingulate gyrus, posterior division { database cross reference=http://orcid.org/0000-0001-6755-0259 }
• posterior cingulate cortex database cross reference BTO:0004250
• posterior cingulate cortex database cross reference EFO:0002471
• posterior cingulate cortex has related synonym posterior cingular cortex { database cross reference=http://en.wikipedia.org/wiki/Posterior_cingulate }
• posterior cingulate cortex database cross reference http://uri.neuinfo.org/nif/nifstd/birnlex_950
• posterior cingulate cortex label posterior cingulate cortex
• posterior cingulate cortex SubClassOf regional part of telencephalon

New Class : medial orbital frontal cortex

• medial orbital frontal cortex database cross reference http://uri.neuinfo.org/nif/nifstd/birnlex_1249
• medial orbital frontal cortex id UBERON:0022352
• medial orbital frontal cortex has broad synonym frontal medial cortex { database cross reference=http://orcid.org/0000-0001-6755-0259 }
• medial orbital frontal cortex definition Component of the orbtial frontal cortex. The rostral boundary is the first slice where the medial orbital gyrus became visible whereas the caudal boundary is the disappearance of the medial orbital gyrus/gyrus rectus. The medial and lateral boundaries are the cingulate cortex on the u2018inflatedu2019 surface and the medial bank of the superior frontal gyrus (or the cingulate gyrus when visible) respectively (Christine Fennema-Notestine). { database cross reference=NIF_GrossAnatomy:birnlex_1249 }
• medial orbital frontal cortex SubClassOf part of some orbitofrontal cortex
• medial orbital frontal cortex has obo namespace uberon
• medial orbital frontal cortex SubClassOf regional part of cerebral cortex
• medial orbital frontal cortex label medial orbital frontal cortex
• medial orbital frontal cortex has exact synonym medial orbitofrontal cortex { database cross reference=UBERON:cjm }

New Class : parietal serous membrane

• parietal serous membrane SubClassOf organ component layer
• parietal serous membrane has exact synonym parietal wall of serous membrane { database cross reference=FMA:15859 }
• parietal serous membrane id UBERON:0022351
• parietal serous membrane EquivalentTo organ component layer and part of some serous membrane and adjacent to some anatomical cavity
• parietal serous membrane SubClassOf adjacent to some anatomical cavity
• parietal serous membrane has obo namespace uberon
• parietal serous membrane SubClassOf mesoderm-derived structure
• parietal serous membrane SubClassOf part of some serous membrane
• parietal serous membrane database cross reference FMA:15859
• parietal serous membrane label parietal serous membrane

New Class : visceral serous membrane

• visceral serous membrane SubClassOf mesoderm-derived structure
• visceral serous membrane SubClassOf adjacent to some organ
• visceral serous membrane EquivalentTo organ component layer and part of some serous membrane and adjacent to some organ
• visceral serous membrane SubClassOf part of some serous membrane
• visceral serous membrane label visceral serous membrane
• visceral serous membrane has obo namespace uberon
• visceral serous membrane id UBERON:0022350
• visceral serous membrane SubClassOf organ component layer
• visceral serous membrane database cross reference FMA:15860
• visceral serous membrane has exact synonym visceral wall of serous membrane { database cross reference=FMA:15860 }

New Class : mesentery of ileum

• mesentery of ileum label mesentery of ileum
• mesentery of ileum SubClassOf mesentery of small intestine
• mesentery of ileum database cross reference FMA:14652
• mesentery of ileum has exact synonym ileal mesentery { database cross reference=FMA:14652 }
• mesentery of ileum id UBERON:0022357
• mesentery of ileum SubClassOf part of some ileum
• mesentery of ileum has obo namespace uberon
• mesentery of ileum EquivalentTo mesentery and part of some ileum
• mesentery of ileum has exact synonym ileum mesentery { database cross reference=FMA:14652 }
• mesentery of ileum has exact synonym mesoileum

New Class : placenta blood vessel

• placenta blood vessel SubClassOf part of some placenta
• placenta blood vessel has broad synonym placental vessel
• placenta blood vessel SubClassOf mixed endoderm/mesoderm-derived structure
• placenta blood vessel id UBERON:0022358
• placenta blood vessel SubClassOf extraembryonic structure
• placenta blood vessel SubClassOf reproductive structure
• placenta blood vessel label placenta blood vessel
• placenta blood vessel has obo namespace uberon
• placenta blood vessel database cross reference http://www.snomedbrowser.com/Codes/Details/280716005
• placenta blood vessel SubClassOf blood vessel
• placenta blood vessel EquivalentTo blood vessel and part of some placenta

New Class : lung field

• lung field has obo namespace uberon
• lung field has exact synonym lung field
• lung field database cross reference http://www.snomedbrowser.com/Codes/Details/34922002
• lung field SubClassOf has potential to develop into some lung
• lung field EquivalentTo anlage and has potential to develop into some lung
• lung field SubClassOf part of some endoderm of foregut
• lung field definition A specific region of the foregut into the area in which the lung will develop. { database cross reference=GOC:dph , database cross reference=GOC:mtg_lung }
• lung field label lung field
• lung field id UBERON:0022361
• lung field SubClassOf anlage
• lung field SubClassOf endoderm-derived structure

New Class : male mammary gland duct

• male mammary gland duct definition A mammary gland duct that is part of a male organism. This structure typically regresses. { database cross reference=UBERON:cjm }
• male mammary gland duct label male mammary gland duct
• male mammary gland duct SubClassOf part of some male organism
• male mammary gland duct has obo namespace uberon
• male mammary gland duct EquivalentTo mammary duct and part of some male organism
• male mammary gland duct SubClassOf mammary duct
• male mammary gland duct id UBERON:0022360

New Class : corticopontine fibers

• corticopontine fibers id UBERON:0022271
• corticopontine fibers has obo namespace uberon
• corticopontine fibers has exact synonym corticopontine fibers { database cross reference=FMA:75190 }
• corticopontine fibers has exact synonym corticopontine fibers set { database cross reference=FMA:75190 }
• corticopontine fibers SubClassOf structure with developmental contribution from neural crest
• corticopontine fibers has related synonym corticopontine fibres { database cross reference=http://en.wikipedia.org/wiki/Corticopontine_fibers }
• corticopontine fibers SubClassOf neuron projection bundle
• corticopontine fibers has exact synonym tractus corticopontinus { database cross reference=FMA:TA , has synonym type=latin term }
• corticopontine fibers has exact synonym fibrae corticopontinae { database cross reference=FMA:TA }
• corticopontine fibers database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1322
• corticopontine fibers label corticopontine fibers
• corticopontine fibers definition Corticopontine fibers, commonly referred to as corticobulbar fibers, are projections from the cerebral cortex to the pontine nuclei. Depending upon the lobe of origin, they can be classified as frontopontine fibers, parietopontine fibers, temporopontine fibers and occipitopontine fibers. They are motor fibers that stretch from the precentral gyrus (motor strip) to the nuclei of cranial nerves V (trigenimal), VII (facial) and XII (hypoglossal). These fibers run alongside the corticospinal fibers. { database cross reference=http://en.wikipedia.org/wiki/Corticopontine_fibers }
• corticopontine fibers database cross reference FMA:75190
• corticopontine fibers has related synonym corticopontine { database cross reference=http://en.wikipedia.org/wiki/Corticopontine_fibers }
• corticopontine fibers has exact synonym corticopontine fibers of pons
• corticopontine fibers database cross reference http://www.snomedbrowser.com/Codes/Details/91366009
• corticopontine fibers database cross reference HBA:cpn
• corticopontine fibers database cross reference http://en.wikipedia.org/wiki/Corticopontine_fibers
• corticopontine fibers has exact synonym corticopontine fibres { database cross reference=FMA:75190 }
• corticopontine fibers database cross reference DHBA:cpn
• corticopontine fibers has exact synonym cortico-pontine fibers { database cross reference=HBA:cpn }
• corticopontine fibers SubClassOf part of some white matter of pontine tegmentum
• corticopontine fibers has exact synonym cortico-pontine fibers, pontine part { database cross reference=DHBA:cpn }
• corticopontine fibers SubClassOf central nervous system cell part cluster

New Class : nucleus of pudendal nerve

• nucleus of pudendal nerve has exact synonym Onuf’s nucleus { database cross reference=FMA:77024 }
• nucleus of pudendal nerve SubClassOf part of some ventral horn of spinal cord
• nucleus of pudendal nerve database cross reference http://en.wikipedia.org/wiki/Onuf%27s_nucleus
• nucleus of pudendal nerve has exact synonym pudendal neural nucleus { database cross reference=FMA:77024 }
• nucleus of pudendal nerve SubClassOf has part some part of some pudendal nerve
• nucleus of pudendal nerve function notes involved in the maintenance of micturition and defecatory continence, as well as muscular contraction during orgasm.
• nucleus of pudendal nerve EquivalentTo neural nucleus and has part some part of some pudendal nerve
• nucleus of pudendal nerve label nucleus of pudendal nerve
• nucleus of pudendal nerve definition A nucleus in the ventral part of the anterior horn of the sacral region of the spinal cord that is the origin of the pudendal nerve. { database cross reference=http://en.wikipedia.org/wiki/Onuf%27s_nucleus , database cross reference=Nucleus }
• nucleus of pudendal nerve SubClassOf part of some sacral spinal cord ventral column
• nucleus of pudendal nerve has exact synonym nucleus of Onuf { database cross reference=FMA:257031 }
• nucleus of pudendal nerve database cross reference FMA:257031
• nucleus of pudendal nerve database cross reference FMA:77024
• nucleus of pudendal nerve has obo namespace uberon
• nucleus of pudendal nerve id UBERON:0022278
• nucleus of pudendal nerve SubClassOf nucleus of spinal cord
• nucleus of pudendal nerve structure notes The neurons in Onufbs nucleus are motoneurons, and like most motoneurons they are characterized by their mulipolarity and large Nissl bodies

New Class : strand of hair on external ear

• strand of hair on external ear id UBERON:0022279
• strand of hair on external ear has obo namespace uberon
• strand of hair on external ear label strand of hair on external ear
• strand of hair on external ear database cross reference FMA:53671
• strand of hair on external ear has exact synonym tragus hair { database cross reference=FMA:53671 }
• strand of hair on external ear has exact synonym hair of tragus { database cross reference=FMA:53671 }
• strand of hair on external ear SubClassOf part of some external ear
• strand of hair on external ear SubClassOf hair of head
• strand of hair on external ear has exact synonym hair of external ear { database cross reference=FMA:53671 }
• strand of hair on external ear EquivalentTo strand of hair and part of some external ear

New Class : splenic flexure of colon

• splenic flexure of colon has obo namespace uberon
• splenic flexure of colon SubClassOf has part some part of some descending colon
• splenic flexure of colon SubClassOf has part some part of some transverse colon
• splenic flexure of colon database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Splenic_Flexure
• splenic flexure of colon has related synonym left colic flexure { database cross reference=http://en.wikipedia.org/wiki/Splenic_flexure }
• splenic flexure of colon database cross reference http://en.wikipedia.org/wiki/Splenic_flexure
• splenic flexure of colon SubClassOf colic flexure
• splenic flexure of colon database cross reference http://www.snomedbrowser.com/Codes/Details/245428003
• splenic flexure of colon definition The splenic (or left colic) flexure is a sharp bend between the transverse and the descending colon in the left upper quadrant of humans. The left colic flexure is near the spleen, and hence called the splenic flexure. There are two colic flexures in the transverse colon — the other being the hepatic flexure in the right upper quadrant. { database cross reference=http://en.wikipedia.org/wiki/Splenic_flexure }
• splenic flexure of colon database cross reference http://linkedlifedata.com/resource/umls/id/C0227387
• splenic flexure of colon label splenic flexure of colon
• splenic flexure of colon has exact synonym splenic flexure { database cross reference=FMA:14551 }
• splenic flexure of colon id UBERON:0022276
• splenic flexure of colon has exact synonym flexura coli splenica { database cross reference=FMA:TA , has synonym type=latin term }
• splenic flexure of colon has exact synonym left colic flexure { database cross reference=FMA:14551 }
• splenic flexure of colon EquivalentTo colic flexure and has part some part of some transverse colon and has part some part of some descending colon
• splenic flexure of colon database cross reference FMA:14551
• splenic flexure of colon SubClassOf develops from some midgut
• splenic flexure of colon has exact synonym splenic flexure of colon { database cross reference=FMA:14551 }

New Class : hepatic flexure of colon

• hepatic flexure of colon database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Hepatic_Flexure
• hepatic flexure of colon definition Hepatic (or the right colic) flexure is the sharp bend between the ascending and the transverse colon. The right colic flexure is adjacent to the liver, and is therefore also known as the hepatic flexure. Thus, the left colic flexure is also known as the splenic flexure (as it is close to the spleen). The hepatic flexure lies in the right upper quadrant of the abdomen in humans. { database cross reference=http://en.wikipedia.org/wiki/Hepatic_flexure }
• hepatic flexure of colon has related synonym right colic flexure { database cross reference=http://en.wikipedia.org/wiki/Hepatic_flexure }
• hepatic flexure of colon id UBERON:0022277
• hepatic flexure of colon has exact synonym flexura coli heaptica { database cross reference=FMA:TA , has synonym type=latin term }
• hepatic flexure of colon EquivalentTo colic flexure and has part some part of some ascending colon and has part some part of some transverse colon
• hepatic flexure of colon database cross reference http://linkedlifedata.com/resource/umls/id/C0227385
• hepatic flexure of colon has obo namespace uberon
• hepatic flexure of colon SubClassOf has part some part of some transverse colon
• hepatic flexure of colon SubClassOf colic flexure
• hepatic flexure of colon database cross reference FMA:14550
• hepatic flexure of colon has exact synonym hepatic flexure of colon { database cross reference=FMA:14550 }
• hepatic flexure of colon has exact synonym right colic flexure { database cross reference=FMA:14550 }
• hepatic flexure of colon SubClassOf has part some part of some ascending colon
• hepatic flexure of colon database cross reference http://www.snomedbrowser.com/Codes/Details/245427008
• hepatic flexure of colon has exact synonym hepatic flexure { database cross reference=FMA:14550 }
• hepatic flexure of colon database cross reference http://en.wikipedia.org/wiki/Hepatic_flexure
• hepatic flexure of colon label hepatic flexure of colon
• hepatic flexure of colon SubClassOf develops from some midgut

New Class : lacrimal papilla

• lacrimal papilla database cross reference http://www.snomedbrowser.com/Codes/Details/362533003
• lacrimal papilla SubClassOf organ part
• lacrimal papilla has exact synonym papilla lacrimalis { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_papilla , has synonym type=latin term }
• lacrimal papilla SubClassOf ectoderm-derived structure
• lacrimal papilla SubClassOf part of some lacrimal drainage system
• lacrimal papilla label lacrimal papilla
• lacrimal papilla definition A small conical elevation at the basal angle of the lacrimal lake. { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_papilla }
• lacrimal papilla has obo namespace uberon
• lacrimal papilla id UBERON:0022274
• lacrimal papilla database cross reference FMA:59407
• lacrimal papilla database cross reference http://en.wikipedia.org/wiki/Lacrimal_papilla

New Class : colic flexure

• colic flexure SubClassOf organ part
• colic flexure database cross reference FMA:14555
• colic flexure SubClassOf part of some colon
• colic flexure has exact synonym flexura coli { database cross reference=FMA:14555 }
• colic flexure id UBERON:0022275
• colic flexure database cross reference http://www.snomedbrowser.com/Codes/Details/245426004
• colic flexure has obo namespace uberon
• colic flexure label colic flexure

New Class : corticobulbar tract

• corticobulbar tract has related synonym corticonuclear tract { database cross reference=http://en.wikipedia.org/wiki/Corticobulbar_tract }
• corticobulbar tract label corticobulbar tract
• corticobulbar tract has related synonym cortico-bulbar tract { database cross reference=http://en.wikipedia.org/wiki/Corticobulbar_tract }
• corticobulbar tract id UBERON:0022272
• corticobulbar tract SubClassOf tract of brain
• corticobulbar tract database cross reference HBA:cbu
• corticobulbar tract has related synonym bulbar { database cross reference=http://en.wikipedia.org/wiki/Corticobulbar_tract }
• corticobulbar tract has related synonym corticobulbar fiber { database cross reference=http://en.wikipedia.org/wiki/Corticobulbar_tract }
• corticobulbar tract SubClassOf part of some white matter of telencephalon
• corticobulbar tract has related synonym cbu-h { database cross reference=DHBA:cbu-h , has synonym type=abbreviation }
• corticobulbar tract has related synonym corticobulbar pathway { database cross reference=http://en.wikipedia.org/wiki/Corticobulbar_tract }
• corticobulbar tract has related synonym corticobulbar { database cross reference=http://en.wikipedia.org/wiki/Corticobulbar_tract }
• corticobulbar tract has obo namespace uberon
• corticobulbar tract has related synonym corticobulbar fibre { database cross reference=http://en.wikipedia.org/wiki/Corticobulbar_tract }
• corticobulbar tract SubClassOf structure with developmental contribution from neural crest
• corticobulbar tract database cross reference DHBA:cbu-h
• corticobulbar tract has related synonym corticobulbar axons { database cross reference=http://en.wikipedia.org/wiki/Corticobulbar_tract }
• corticobulbar tract definition The corticobulbar (or corticonuclear) tract is a white matter pathway connecting the cerebral cortex to the brainstem. The term “bulbar” refers to the brainstem, as “bulb” was a historical term meaning the area currently called the brainstem. The ‘bulb’ is an archaic term for the medulla oblongata. In clinical usage, it includes the pons as well. { database cross reference=http://en.wikipedia.org/wiki/Corticobulbar_tract }
• corticobulbar tract database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1319
• corticobulbar tract database cross reference http://en.wikipedia.org/wiki/Corticobulbar_tract

New Class : lacrimal lake

• lacrimal lake database cross reference http://www.snomedbrowser.com/Codes/Details/368792002
• lacrimal lake SubClassOf part of some conjunctiva
• lacrimal lake definition A small cistern-like area of the conjunctiva at the medial angle of the eye, in which the tears collect after bathing the front surface of the eyeball and the conjunctival sac. { database cross reference=MGI:anna }
• lacrimal lake has obo namespace uberon
• lacrimal lake database cross reference http://en.wikipedia.org/wiki/Lacrimal_lake
• lacrimal lake id UBERON:0022273
• lacrimal lake SubClassOf region of conjunctiva
• lacrimal lake database cross reference FMA:59402
• lacrimal lake label lacrimal lake
• lacrimal lake has exact synonym lacus lacrimalis { has synonym type=latin term }
• lacrimal lake has exact synonym lacrymal lake { database cross reference=MGI:anna }

New Class : epithelium of crypt of Lieberkuhn of small intestine

• epithelium of crypt of Lieberkuhn of small intestine EquivalentTo epithelium and part of some crypt of Lieberkuhn of small intestine
• epithelium of crypt of Lieberkuhn of small intestine id UBERON:0022280
• epithelium of crypt of Lieberkuhn of small intestine database cross reference FMA:63243
• epithelium of crypt of Lieberkuhn of small intestine SubClassOf epithelium of crypt of Lieberkuhn
• epithelium of crypt of Lieberkuhn of small intestine label epithelium of crypt of Lieberkuhn of small intestine
• epithelium of crypt of Lieberkuhn of small intestine SubClassOf part of some crypt of Lieberkuhn of small intestine
• epithelium of crypt of Lieberkuhn of small intestine SubClassOf epithelium of small intestine
• epithelium of crypt of Lieberkuhn of small intestine has exact synonym epithelium of small intestinal crypt of Lieberkuhn { database cross reference=FMA:63243 }
• epithelium of crypt of Lieberkuhn of small intestine has obo namespace uberon

New Class : epithelium of crypt of Lieberkuhn of large intestine

• epithelium of crypt of Lieberkuhn of large intestine id UBERON:0022281
• epithelium of crypt of Lieberkuhn of large intestine has obo namespace uberon
• epithelium of crypt of Lieberkuhn of large intestine EquivalentTo epithelium and part of some crypt of Lieberkuhn of large intestine
• epithelium of crypt of Lieberkuhn of large intestine label epithelium of crypt of Lieberkuhn of large intestine
• epithelium of crypt of Lieberkuhn of large intestine SubClassOf part of some crypt of Lieberkuhn of large intestine
• epithelium of crypt of Lieberkuhn of large intestine SubClassOf epithelium of large intestine
• epithelium of crypt of Lieberkuhn of large intestine database cross reference FMA:63628
• epithelium of crypt of Lieberkuhn of large intestine SubClassOf epithelium of crypt of Lieberkuhn

New Class : secretion of Harderian gland

• secretion of Harderian gland SubClassOf produced by some Harderian gland
• secretion of Harderian gland id UBERON:0022282
• secretion of Harderian gland definition A merocrine secretion that is produced by a Harderian gland, containing lipids { database cross reference=http://dx.doi.org/10.1007/978-3-642-76685-5_2 }
• secretion of Harderian gland taxon notes in amphibians, chiefly seromucoid with some lipids[PMID:7559104]
• secretion of Harderian gland has exact synonym Harderian gland secretion
• secretion of Harderian gland SubClassOf bodily secretion
• secretion of Harderian gland has obo namespace uberon
• secretion of Harderian gland has exact synonym Harderian gland fluid
• secretion of Harderian gland taxon notes in the armadillo and opossum, mucous or serous acini may be present[PMID:7559104]
• secretion of Harderian gland taxon notes in mammals, predominantly lipid; mucoid secretion restricted to extraglandular duct tissue[PMID:7559104]
• secretion of Harderian gland label secretion of Harderian gland
• secretion of Harderian gland taxon notes in birds, mucoid and lipid[PMID:7559104]
• secretion of Harderian gland SubClassOf produced by some medial gland of ocular region

New Class : tear film

• tear film SubClassOf part of some anterior segment of eyeball
• tear film SubClassOf part of some eye surface region
• tear film definition An aqueous substance that covers the anterior surface of the eyeball, keeping the cornea wet. { database cross reference=UBERON:cjm }
• tear film has obo namespace uberon
• tear film SubClassOf bodily secretion
• tear film id UBERON:0022287
• tear film label tear film
• tear film function notes maintenance of the avascular transparent corneal epithelium
• tear film structure notes The tear film is structurally complex with three distinct layers: a surface lipid layer (0.1–0.2 μm thick), a middle aqueous layer (7–8 μm thick), and an inner mucus layer (30 μm thick)[http://physiologyonline.physiology.org/content/13/2/97]
• tear film SubClassOf composed primarily of some secretion of lacrimal gland

New Class : surface of eyeball

• surface of eyeball SubClassOf anatomical surface
• surface of eyeball has related synonym surface of region of wall of eyeball { database cross reference=FMA:58315 }
• surface of eyeball label surface of eyeball
• surface of eyeball database cross reference FMA:58315
• surface of eyeball id UBERON:0022288
• surface of eyeball EquivalentTo anatomical surface and part of some eyeball of camera-type eye
• surface of eyeball has obo namespace uberon
• surface of eyeball SubClassOf part of some eyeball of camera-type eye

New Class : pineal recess of third ventricle

• pineal recess of third ventricle has exact synonym pineal recess { database cross reference=FMA:78458 }
• pineal recess of third ventricle has related synonym recessus epiphysis { database cross reference=NeuroNames:456 , has synonym type=latin term }
• pineal recess of third ventricle SubClassOf part of some third ventricle
• pineal recess of third ventricle database cross reference http://www.snomedbrowser.com/Codes/Details/369281005
• pineal recess of third ventricle database cross reference http://www.snomedbrowser.com/Codes/Details/280070003
• pineal recess of third ventricle definition The diverticulum of the thin roof of the dorsocaudal third ventricle that projects into the stalk of the pineal gland. { database cross reference=ISBN:06834007X }
• pineal recess of third ventricle database cross reference http://en.wikipedia.org/wiki/Pineal_recess
• pineal recess of third ventricle has exact synonym recessus pinealis { database cross reference=FMA:TA , has synonym type=latin term }
• pineal recess of third ventricle database cross reference DHBA:266441661
• pineal recess of third ventricle database cross reference FMA:78458
• pineal recess of third ventricle has exact synonym pineal recess of 3V { database cross reference=DHBA:266441661 }
• pineal recess of third ventricle has obo namespace uberon
• pineal recess of third ventricle database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=456
• pineal recess of third ventricle label pineal recess of third ventricle
• pineal recess of third ventricle id UBERON:0022283
• pineal recess of third ventricle SubClassOf anatomical cavity

New Class : lacrimal gland bud

• lacrimal gland bud taxon notes in mouse, the primary bud arises around E13.5 and extends caudally into the surrounding neural-crest derived periocular mesenchyme; between E15.5 and E16.5 the bud undergoes branching morphogenesis, forming both a major extra-orbital lobe and a minor intraorbital lobe
• lacrimal gland bud has obo namespace uberon
• lacrimal gland bud SubClassOf epithelial bud
• lacrimal gland bud definition the single bud-like invagination of the conjunctival fornix epithelium at the temporal aspect of the eye that signals lacrimal gland formation (Int Rev Cytol. 1996;168:1-80. Cell biology of the harderian gland) { database cross reference=MGI:anna }
• lacrimal gland bud SubClassOf eye epithelium
• lacrimal gland bud SubClassOf part of some lacrimal apparatus
• lacrimal gland bud label lacrimal gland bud
• lacrimal gland bud id UBERON:0022284
• lacrimal gland bud database cross reference EMAPA:35464

New Class : strand of tylotrich hair

• strand of tylotrich hair has obo namespace uberon
• strand of tylotrich hair SubClassOf strand of hair
• strand of tylotrich hair id UBERON:0022285
• strand of tylotrich hair definition a single large hair, surrounded by neurovascular tissue at the level of the sebaceous gland, with a hair follicle innervated by a hair-tylotrich neuron (CL:1001436), a rapidly acting mechanoreceptor. { database cross reference=CL:1001436 , database cross reference=MP:0000977 }
• strand of tylotrich hair label strand of tylotrich hair
• strand of tylotrich hair database cross reference CL:1001436

New Class : secretion of nictitans gland

• secretion of nictitans gland SubClassOf produced by some medial gland of ocular region
• secretion of nictitans gland taxon notes mostly mucuous in pig[ISBN:1118473523]
• secretion of nictitans gland label secretion of nictitans gland
• secretion of nictitans gland SubClassOf produced by some nictitans gland
• secretion of nictitans gland has obo namespace uberon
• secretion of nictitans gland taxon notes seromucuous in cattle, cat and dog, elephant [ISBN:1118473523]
• secretion of nictitans gland SubClassOf bodily secretion
• secretion of nictitans gland has exact synonym nictitans gland secretion
• secretion of nictitans gland has exact synonym nictitans gland fluid
• secretion of nictitans gland definition A secretion that is produced by a nictitans gland, containing glycoprotein { database cross reference=http://dx.doi.org/10.1007/978-3-642-76685-5_2 }
• secretion of nictitans gland taxon notes serous in horse [ISBN:1118473523]
• secretion of nictitans gland id UBERON:0022286

New Class : splenic arteriole

• splenic arteriole SubClassOf part of some spleen
• splenic arteriole database cross reference http://www.snomedbrowser.com/Codes/Details/282511007
• splenic arteriole SubClassOf arteriole
• splenic arteriole EquivalentTo arteriole and part of some spleen
• splenic arteriole SubClassOf abdomen blood vessel
• splenic arteriole database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Splenic_Arteriole
• splenic arteriole label splenic arteriole
• splenic arteriole id UBERON:0022292
• splenic arteriole has obo namespace uberon

New Class : reproductive system fluid/secretion

• reproductive system fluid/secretion has related synonym genital secretion
• reproductive system fluid/secretion has obo namespace uberon
• reproductive system fluid/secretion SubClassOf organism substance
• reproductive system fluid/secretion has related synonym reproductive system fluid
• reproductive system fluid/secretion has related synonym reproductive system secretion
• reproductive system fluid/secretion id UBERON:0022293
• reproductive system fluid/secretion has related synonym genital fluid
• reproductive system fluid/secretion EquivalentTo organism substance and produced by some reproductive system
• reproductive system fluid/secretion SubClassOf produced by some reproductive system
• reproductive system fluid/secretion label reproductive system fluid/secretion

New Class : inferior palpebral branch of infra-orbital nerve

• inferior palpebral branch of infra-orbital nerve database cross reference FMA:52983
• inferior palpebral branch of infra-orbital nerve EquivalentTo nerve and innervates some lower eyelid and branching part of some infra-orbital nerve
• inferior palpebral branch of infra-orbital nerve has exact synonym rami palpebrales inferiores nervi infraorbitalis { database cross reference=http://en.wikipedia.org/wiki/Inferior_palpebral_nerve , has synonym type=latin term }
• inferior palpebral branch of infra-orbital nerve has obo namespace uberon
• inferior palpebral branch of infra-orbital nerve label inferior palpebral branch of infra-orbital nerve
• inferior palpebral branch of infra-orbital nerve id UBERON:0022296
• inferior palpebral branch of infra-orbital nerve definition A nerve that innervates a lower eyelid and is a branch of the infra-orbital branch of the maxillary nerve. { database cross reference=UBERON:cjm }
• inferior palpebral branch of infra-orbital nerve database cross reference http://en.wikipedia.org/wiki/Inferior_palpebral_nerve
• inferior palpebral branch of infra-orbital nerve SubClassOf palpebral branch of infra-orbital nerve
• inferior palpebral branch of infra-orbital nerve SubClassOf innervates some lower eyelid
• inferior palpebral branch of infra-orbital nerve SubClassOf branching part of some infra-orbital nerve
• inferior palpebral branch of infra-orbital nerve SubClassOf lower eyelid nerve

New Class : palpebral branch of infra-orbital nerve

• palpebral branch of infra-orbital nerve definition A nerve that innervates an eyelid and is a branch of the infra-orbital branch of the maxillary nerve. { database cross reference=UBERON:cjm }
• palpebral branch of infra-orbital nerve id UBERON:0022297
• palpebral branch of infra-orbital nerve database cross reference http://www.snomedbrowser.com/Codes/Details/280236007
• palpebral branch of infra-orbital nerve SubClassOf branching part of some infra-orbital nerve
• palpebral branch of infra-orbital nerve has exact synonym palpebral branch of maxillary nerve
• palpebral branch of infra-orbital nerve label palpebral branch of infra-orbital nerve
• palpebral branch of infra-orbital nerve EquivalentTo nerve and innervates some eyelid and branching part of some infra-orbital nerve
• palpebral branch of infra-orbital nerve SubClassOf innervates some eyelid
• palpebral branch of infra-orbital nerve has obo namespace uberon
• palpebral branch of infra-orbital nerve SubClassOf eyelid nerve

New Class : morphological boundary

• morphological boundary has obo namespace uberon
• morphological boundary SubClassOf bona-fide anatomical boundary
• morphological boundary id UBERON:0022294
• morphological boundary database cross reference CARO:0001007
• morphological boundary label morphological boundary
• morphological boundary definition A two dimensional anatomical structure that corresponds to some structural discontinuity. { database cross reference=CARO:0001007 }

New Class : integumental surface

• integumental surface has obo namespace uberon
• integumental surface SubClassOf morphological boundary
• integumental surface database cross reference CARO:0001007
• integumental surface id UBERON:0022295
• integumental surface SubClassOf adjacent to some integumental system
• integumental surface SubClassOf adjacent to some space surrounding organism
• integumental surface label integumental surface
• integumental surface definition The outer surface of an organism or its integumental system. { database cross reference=CARO:DOS }

New Class : lower eyelid nerve

• lower eyelid nerve has obo namespace uberon
• lower eyelid nerve EquivalentTo nerve and innervates some lower eyelid
• lower eyelid nerve label lower eyelid nerve
• lower eyelid nerve definition A nerve that innervates a lower eyelid. { database cross reference=UBERON:cjm }
• lower eyelid nerve SubClassOf innervates some lower eyelid
• lower eyelid nerve SubClassOf eyelid nerve
• lower eyelid nerve id UBERON:0022298

New Class : upper eyelid nerve

• upper eyelid nerve definition A nerve that innervates an upper eyelid. { database cross reference=UBERON:cjm }
• upper eyelid nerve EquivalentTo nerve and innervates some upper eyelid
• upper eyelid nerve SubClassOf innervates some upper eyelid
• upper eyelid nerve label upper eyelid nerve
• upper eyelid nerve id UBERON:0022299
• upper eyelid nerve has obo namespace uberon
• upper eyelid nerve SubClassOf eyelid nerve

New Class : peduncle of thalamus

• peduncle of thalamus has obo namespace uberon
• peduncle of thalamus SubClassOf peduncle of diencephalon
• peduncle of thalamus has exact synonym thalamic peduncle
• peduncle of thalamus SubClassOf part of some dorsal plus ventral thalamus
• peduncle of thalamus label peduncle of thalamus
• peduncle of thalamus id UBERON:0022236
• peduncle of thalamus EquivalentTo peduncle of neuraxis and part of some dorsal plus ventral thalamus

New Class : anterior thalamic peduncle

• anterior thalamic peduncle database cross reference DHBA:rthp
• anterior thalamic peduncle has exact synonym rostral peduncle of thalamus { database cross reference=FMA:62074 }
• anterior thalamic peduncle has exact synonym frontal peduncle { database cross reference=FMA:62074 }
• anterior thalamic peduncle has exact synonym frontal thalamic peduncle { database cross reference=FMA:62074 }
• anterior thalamic peduncle SubClassOf peduncle of thalamus
• anterior thalamic peduncle SubClassOf part of some dorsal plus ventral thalamus
• anterior thalamic peduncle has exact synonym anterior peduncle { database cross reference=FMA:62074 }
• anterior thalamic peduncle SubClassOf part of some white matter of telencephalon
• anterior thalamic peduncle label anterior thalamic peduncle
• anterior thalamic peduncle SubClassOf white matter of telencephalon
• anterior thalamic peduncle database cross reference HBA:rthp
• anterior thalamic peduncle id UBERON:0022237
• anterior thalamic peduncle has obo namespace uberon
• anterior thalamic peduncle database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=369
• anterior thalamic peduncle database cross reference FMA:62074

New Class : peduncle of diencephalon

• peduncle of diencephalon SubClassOf peduncle of neuraxis
• peduncle of diencephalon database cross reference FMA:62444
• peduncle of diencephalon label peduncle of diencephalon
• peduncle of diencephalon SubClassOf diencephalic white matter
• peduncle of diencephalon id UBERON:0022235
• peduncle of diencephalon has obo namespace uberon
• peduncle of diencephalon EquivalentTo peduncle of neuraxis and part of some diencephalon
• peduncle of diencephalon has exact synonym diencephalon peduncle { database cross reference=FMA:62444 }
• peduncle of diencephalon SubClassOf part of some diencephalon

New Class : medial longitudinal stria

• medial longitudinal stria has related synonym medial white stria of Lancisi { database cross reference=NeuroNames:175 }
• medial longitudinal stria has related synonym stria Lancisii { database cross reference=NeuroNames:175 , has synonym type=latin term }
• medial longitudinal stria has related synonym taenia libra { database cross reference=NeuroNames:175 , has synonym type=latin term }
• medial longitudinal stria has related synonym medial longitudinal stria of Lancisi { database cross reference=NeuroNames:175 }
• medial longitudinal stria has exact synonym medial stripe of lancisi { database cross reference=FMA:67956 }
• medial longitudinal stria database cross reference FMA:67956
• medial longitudinal stria has related synonym taenia libera Lancisi { database cross reference=NeuroNames:175 , has synonym type=latin term }
• medial longitudinal stria has related synonym medial longitudinal stria { database cross reference=NeuroNames:175 }
• medial longitudinal stria database cross reference DHBA:mls
• medial longitudinal stria has related synonym stria longitudinalis medialis { database cross reference=NeuroNames:175 , has synonym type=latin term }
• medial longitudinal stria has obo namespace uberon
• medial longitudinal stria database cross reference HBA:mls
• medial longitudinal stria label medial longitudinal stria
• medial longitudinal stria SubClassOf white matter of limbic lobe
• medial longitudinal stria id UBERON:0022234
• medial longitudinal stria SubClassOf part of some white matter of telencephalon
• medial longitudinal stria has exact synonym stria of lancisi { database cross reference=FMA:67956 }
• medial longitudinal stria has exact synonym medial longitudinal stria of lancisi { database cross reference=FMA:67956 }
• medial longitudinal stria SubClassOf stria of telencephalon
• medial longitudinal stria SubClassOf part of some supracallosal gyrus
• medial longitudinal stria has exact synonym medial white stria of lancisi { database cross reference=FMA:67956 }
• medial longitudinal stria database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=175
• medial longitudinal stria has related synonym stria longitudinalis interna { database cross reference=NeuroNames:175 , has synonym type=latin term }
• medial longitudinal stria has related synonym medial stripe of Lancisi { database cross reference=NeuroNames:175 }

New Class : secondary visual cortex

• secondary visual cortex database cross reference EMAPA:35758
• secondary visual cortex has obo namespace uberon
• secondary visual cortex database cross reference MA:0000915
• secondary visual cortex id UBERON:0022232
• secondary visual cortex SubClassOf regional part of telencephalon
• secondary visual cortex SubClassOf part of some occipital lobe
• secondary visual cortex SubClassOf has part some part of some Brodmann (1909) area 18
• secondary visual cortex database cross reference EMAPS:3575828
• secondary visual cortex label secondary visual cortex

New Class : retrohippocampal region

• retrohippocampal region has exact synonym retrohippocampal cortex { database cross reference=MA:0000920 }
• retrohippocampal region database cross reference MA:0000920
• retrohippocampal region SubClassOf regional part of telencephalon
• retrohippocampal region SubClassOf part of some hippocampal formation
• retrohippocampal region has obo namespace uberon
• retrohippocampal region database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2729
• retrohippocampal region database cross reference ABA:RHP
• retrohippocampal region id UBERON:0022230
• retrohippocampal region database cross reference EMAPA:35745
• retrohippocampal region label retrohippocampal region

New Class : forebrain ipsilateral fiber tracts

• forebrain ipsilateral fiber tracts has obo namespace uberon
• forebrain ipsilateral fiber tracts has related synonym FIFT { database cross reference=DHBA:FIFT , has synonym type=abbreviation }
• forebrain ipsilateral fiber tracts label forebrain ipsilateral fiber tracts
• forebrain ipsilateral fiber tracts id UBERON:0022247
• forebrain ipsilateral fiber tracts SubClassOf fasciculus of brain
• forebrain ipsilateral fiber tracts database cross reference DHBA:FIFT
• forebrain ipsilateral fiber tracts SubClassOf part of some white matter of forebrain

New Class : cerebral nerve fasciculus

• cerebral nerve fasciculus SubClassOf part of some telencephalon
• cerebral nerve fasciculus has exact synonym telencephalic nerve fascicle
• cerebral nerve fasciculus has exact synonym telencephalic fascicle
• cerebral nerve fasciculus label cerebral nerve fasciculus
• cerebral nerve fasciculus EquivalentTo nerve fasciculus and part of some telencephalon
• cerebral nerve fasciculus has exact synonym cerebral fasciculus { database cross reference=FMA:260712 }
• cerebral nerve fasciculus id UBERON:0022248
• cerebral nerve fasciculus has obo namespace uberon
• cerebral nerve fasciculus has exact synonym nerve fascicle of telencephalon
• cerebral nerve fasciculus has exact synonym cerebral fascicle { database cross reference=FMA:260712 }
• cerebral nerve fasciculus SubClassOf structure with developmental contribution from neural crest
• cerebral nerve fasciculus SubClassOf fasciculus of brain
• cerebral nerve fasciculus database cross reference FMA:260712

New Class : anterior orbital gyrus

• anterior orbital gyrus has obo namespace uberon
• anterior orbital gyrus label anterior orbital gyrus
• anterior orbital gyrus has related synonym AOrG { database cross reference=HBA:AOrG , has synonym type=abbreviation }
• anterior orbital gyrus database cross reference http://www.snomedbrowser.com/Codes/Details/279196000
• anterior orbital gyrus database cross reference FMA:256196
• anterior orbital gyrus database cross reference HBA:AOrG
• anterior orbital gyrus id UBERON:0022244
• anterior orbital gyrus SubClassOf orbital gyrus

New Class : posterior thalamic peduncle

• posterior thalamic peduncle has exact synonym posterior peduncle { database cross reference=FMA:62077 }
• posterior thalamic peduncle label posterior thalamic peduncle
• posterior thalamic peduncle has obo namespace uberon
• posterior thalamic peduncle has exact synonym occipital peduncle { database cross reference=FMA:62077 }
• posterior thalamic peduncle database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=372
• posterior thalamic peduncle SubClassOf part of some dorsal plus ventral thalamus
• posterior thalamic peduncle id UBERON:0022243
• posterior thalamic peduncle SubClassOf peduncle of thalamus
• posterior thalamic peduncle has exact synonym ventrocaudal thalamic peduncle { database cross reference=FMA:62077 }
• posterior thalamic peduncle has exact synonym occipital thalamic peduncle { database cross reference=FMA:62077 }
• posterior thalamic peduncle database cross reference FMA:62077

New Class : superior longitudinal fasciculus

• superior longitudinal fasciculus database cross reference DHBA:slf
• superior longitudinal fasciculus SubClassOf cerebral nerve fasciculus
• superior longitudinal fasciculus SubClassOf part of some white matter of telencephalon
• superior longitudinal fasciculus database cross reference http://www.snomedbrowser.com/Codes/Details/369082006
• superior longitudinal fasciculus database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2080
• superior longitudinal fasciculus id UBERON:0022246
• superior longitudinal fasciculus has related synonym superior longitudinal fascicle { database cross reference=http://en.wikipedia.org/wiki/Superior_longitudinal_fasciculus }
• superior longitudinal fasciculus definition The superior longitudinal fasciculus (also called the superior longitudinal fascicle or SLF) is a pair of long bi-directional bundles of neurons connecting the front and the back of the cerebrum. Each association fiber bundle is lateral to the centrum ovale of a cerebral hemisphere and connects the frontal, occipital, parietal, and temporal lobes. The neurons pass from the frontal lobe through the operculum to the posterior end of the lateral sulcus where numerous neurons radiate into the occipital lobe and other neurons turn downward and forward around the putamen and radiate to anterior portions of the temporal lobe. { database cross reference=http://en.wikipedia.org/wiki/Superior_longitudinal_fasciculus }
• superior longitudinal fasciculus label superior longitudinal fasciculus
• superior longitudinal fasciculus database cross reference FMA:77631
• superior longitudinal fasciculus database cross reference http://en.wikipedia.org/wiki/Superior_longitudinal_fasciculus
• superior longitudinal fasciculus database cross reference HBA:slf
• superior longitudinal fasciculus has obo namespace uberon

New Class : inferior thalamic peduncle

• inferior thalamic peduncle label inferior thalamic peduncle
• inferior thalamic peduncle has exact synonym temporal thalamic peduncle { database cross reference=FMA:62076 }
• inferior thalamic peduncle has obo namespace uberon
• inferior thalamic peduncle database cross reference HBA:ithp
• inferior thalamic peduncle id UBERON:0022242
• inferior thalamic peduncle SubClassOf part of some dorsal plus ventral thalamus
• inferior thalamic peduncle database cross reference DHBA:ithp
• inferior thalamic peduncle has exact synonym temporal peduncle { database cross reference=FMA:62076 }
• inferior thalamic peduncle SubClassOf peduncle of thalamus
• inferior thalamic peduncle database cross reference FMA:62076
• inferior thalamic peduncle has exact synonym inferior peduncle { database cross reference=FMA:62076 }
• inferior thalamic peduncle database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=371

New Class : superior thalamic peduncle

• superior thalamic peduncle label superior thalamic peduncle
• superior thalamic peduncle has exact synonym centroparietal thalamic peduncle { database cross reference=FMA:62075 }
• superior thalamic peduncle id UBERON:0022241
• superior thalamic peduncle SubClassOf peduncle of thalamus
• superior thalamic peduncle has exact synonym middle thalamic peduncle { database cross reference=FMA:62075 }
• superior thalamic peduncle database cross reference FMA:62075
• superior thalamic peduncle has exact synonym superior peduncle { database cross reference=FMA:62075 }
• superior thalamic peduncle SubClassOf part of some dorsal plus ventral thalamus
• superior thalamic peduncle has obo namespace uberon
• superior thalamic peduncle has exact synonym centroparietal peduncle { database cross reference=FMA:62075 }

New Class : endolemniscal nucleus

• endolemniscal nucleus id UBERON:0022258
• endolemniscal nucleus database cross reference FMA:77099
• endolemniscal nucleus database cross reference HBA:EL
• endolemniscal nucleus has obo namespace uberon
• endolemniscal nucleus SubClassOf part of some myelencephalon
• endolemniscal nucleus SubClassOf hindbrain nucleus
• endolemniscal nucleus database cross reference DHBA:EL
• endolemniscal nucleus has related synonym EL { database cross reference=HBA:EL , has synonym type=abbreviation }
• endolemniscal nucleus label endolemniscal nucleus

New Class : radiation of neuraxis

• radiation of neuraxis id UBERON:0022259
• radiation of neuraxis label radiation of neuraxis
• radiation of neuraxis SubClassOf white matter
• radiation of neuraxis database cross reference FMA:83859
• radiation of neuraxis has exact synonym neuraxis radiation { database cross reference=FMA:83859 }
• radiation of neuraxis has obo namespace uberon

New Class : precentral sulcus

• precentral sulcus database cross reference FMA:83800
• precentral sulcus database cross reference DHBA:prcs
• precentral sulcus SubClassOf subarachnoid sulcus
• precentral sulcus SubClassOf frontal sulcus
• precentral sulcus database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Precentral_Sulcus
• precentral sulcus definition The precentral sulcus lies parallel to, and in front of, the central sulcus. (A sulcus is one of the prominent grooves on the surface of the human brain. ) The precentral sulcus divides the inferior, middle, and superior frontal gyri from the precentral gyrus. In the majority of brains, the precentral sulcus is divided into two parts: the inferior precentral sulcus and the superior precentral sulcus. However, the precentral sulcus may also be divided into three parts or form one continuous sulcus. { database cross reference=http://en.wikipedia.org/wiki/Precentral_sulcus }
• precentral sulcus database cross reference http://en.wikipedia.org/wiki/Precentral_sulcus
• precentral sulcus label precentral sulcus
• precentral sulcus id UBERON:0022252
• precentral sulcus database cross reference HBA:prcs
• precentral sulcus has obo namespace uberon
• precentral sulcus database cross reference http://www.snomedbrowser.com/Codes/Details/279341002
• precentral sulcus SubClassOf part of some frontal sulcus

New Class : subcallosal fasciculus

• subcallosal fasciculus has related synonym superior fronto-occipital fasciculus { database cross reference=NeuroNames:2141 }
• subcallosal fasciculus database cross reference FMA:77637
• subcallosal fasciculus database cross reference HBA:scf
• subcallosal fasciculus has related synonym superior occipitofrontal fasciculus { database cross reference=NeuroNames:2141 }
• subcallosal fasciculus SubClassOf cerebral nerve fasciculus
• subcallosal fasciculus has obo namespace uberon
• subcallosal fasciculus id UBERON:0022250
• subcallosal fasciculus SubClassOf part of some white matter of telencephalon
• subcallosal fasciculus has related synonym superior fronto-occipital bundle { database cross reference=NeuroNames:2141 }
• subcallosal fasciculus label subcallosal fasciculus
• subcallosal fasciculus has related synonym superior occipito-frontal fascicle { database cross reference=NeuroNames:2141 }
• subcallosal fasciculus database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2141
• subcallosal fasciculus has related synonym subcallosal bundle { database cross reference=NeuroNames:2141 }

New Class : subthalamic fasciculus

• subthalamic fasciculus database cross reference FMA:77525
• subthalamic fasciculus SubClassOf connects some subthalamic nucleus
• subthalamic fasciculus database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2280
• subthalamic fasciculus SubClassOf connects some globus pallidus
• subthalamic fasciculus has related synonym subthalamic fasciculus { database cross reference=NeuroNames:2280 }
• subthalamic fasciculus SubClassOf part of some forebrain ipsilateral fiber tracts
• subthalamic fasciculus label subthalamic fasciculus
• subthalamic fasciculus has related synonym fasciculus subthalamicus { database cross reference=NeuroNames:2280 , has synonym type=latin term }
• subthalamic fasciculus SubClassOf ventral thalamic fasciculus
• subthalamic fasciculus database cross reference http://en.wikipedia.org/wiki/Subthalamic_fasciculus
• subthalamic fasciculus has related synonym subthalamic fascicle { database cross reference=NeuroNames:2280 }
• subthalamic fasciculus database cross reference http://www.snomedbrowser.com/Codes/Details/369187003
• subthalamic fasciculus database cross reference HBA:sthf
• subthalamic fasciculus definition The subthalamic fasciculus is a tract which connects the subthalamic nucleus and the globus pallidus. It is a bidirectional connection between the GP and the subthalamic nucleus, including (1) fibers running from the GPe to the subthalamic nucleus, and (2) fibers running from the STN back to the GP. { database cross reference=http://en.wikipedia.org/wiki/Subthalamic_fasciculus }
• subthalamic fasciculus has obo namespace uberon
• subthalamic fasciculus database cross reference DHBA:sthf
• subthalamic fasciculus id UBERON:0022256
• subthalamic fasciculus SubClassOf part of some ventral thalamus

New Class : ventral thalamic fasciculus

• ventral thalamic fasciculus has exact synonym fasciculus thalamicus { database cross reference=FMA:TA }
• ventral thalamic fasciculus database cross reference FMA:62065
• ventral thalamic fasciculus has exact synonym thalamic fasciculus { database cross reference=FMA:62065 }
• ventral thalamic fasciculus database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=439
• ventral thalamic fasciculus SubClassOf part of some forebrain ipsilateral fiber tracts
• ventral thalamic fasciculus EquivalentTo fasciculus of brain and part of some ventral thalamus
• ventral thalamic fasciculus has obo namespace uberon
• ventral thalamic fasciculus has exact synonym fasciculus thalamicus [h1] { database cross reference=FMA:TA }
• ventral thalamic fasciculus SubClassOf part of some ventral thalamus
• ventral thalamic fasciculus label ventral thalamic fasciculus
• ventral thalamic fasciculus has exact synonym tegmental area h1 { database cross reference=FMA:62065 }
• ventral thalamic fasciculus id UBERON:0022254
• ventral thalamic fasciculus has exact synonym field H1 { database cross reference=FMA:62065 }
• ventral thalamic fasciculus SubClassOf fasciculus of brain
• ventral thalamic fasciculus has exact synonym forel’s field h1 { database cross reference=FMA:62065 }
• ventral thalamic fasciculus database cross reference HBA:thf
• ventral thalamic fasciculus database cross reference DHBA:thf
• ventral thalamic fasciculus has exact synonym thalamic fasciculus [h1] { database cross reference=FMA:62065 }
• ventral thalamic fasciculus database cross reference http://www.snomedbrowser.com/Codes/Details/369185006

New Class : auditory radiation

• auditory radiation database cross reference http://en.wikipedia.org/wiki/Acoustic_radiation
• auditory radiation definition The acoustic radiations or auditory radiations are structures found in the brain, in the ventral cochlear pathway, a part of the auditory system. Lesions to the auditory radiations could be a cause of cortical deafness. { database cross reference=http://en.wikipedia.org/wiki/Acoustic_radiation }
• auditory radiation has exact synonym geniculotemporal tract { database cross reference=FMA:62413 }
• auditory radiation has exact synonym acoustic radiation { database cross reference=FMA:62413 }
• auditory radiation has exact synonym geniculotemporal radiation { database cross reference=FMA:62413 }
• auditory radiation id UBERON:0022262
• auditory radiation has obo namespace uberon
• auditory radiation SubClassOf part of some forebrain ipsilateral fiber tracts
• auditory radiation has related synonym auditory radiations { database cross reference=http://en.wikipedia.org/wiki/Acoustic_radiation }
• auditory radiation has exact synonym radiatio acustica { database cross reference=FMA:TA , has synonym type=latin term }
• auditory radiation database cross reference DHBA:ar
• auditory radiation database cross reference FMA:62413
• auditory radiation label auditory radiation
• auditory radiation SubClassOf radiation of cerebral hemisphere
• auditory radiation database cross reference HBA:ar
• auditory radiation has related synonym auditory radiation { database cross reference=http://en.wikipedia.org/wiki/Acoustic_radiation }

New Class : optic radiation

• optic radiation has related synonym geniculocalcarine tract { database cross reference=http://en.wikipedia.org/wiki/Optic_radiation }
• optic radiation SubClassOf part of some forebrain ipsilateral fiber tracts
• optic radiation definition The optic radiation (also known as the geniculo-calcarine tract or as the geniculostriate pathway) is a collection of axons from relay neurons in the lateral geniculate nucleus of the thalamus carrying visual information to the visual cortex (also called striate cortex) along the calcarine fissure. There is one such tract on each side of the brain. { database cross reference=http://en.wikipedia.org/wiki/Optic_radiation }
• optic radiation has related synonym geniculostriate pathway { database cross reference=http://en.wikipedia.org/wiki/Optic_radiation }
• optic radiation database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1440
• optic radiation has related synonym meyer%27s loop { database cross reference=http://en.wikipedia.org/wiki/Optic_radiation }
• optic radiation id UBERON:0022264
• optic radiation has obo namespace uberon
• optic radiation has related synonym optic radiations { database cross reference=http://en.wikipedia.org/wiki/Optic_radiation }
• optic radiation has related synonym radiatio optica { database cross reference=http://en.wikipedia.org/wiki/Optic_radiation }
• optic radiation label optic radiation
• optic radiation database cross reference DHBA:or
• optic radiation has related synonym archambault%27s loop { database cross reference=http://en.wikipedia.org/wiki/Optic_radiation }
• optic radiation has exact synonym Gratiolet’s radiation { database cross reference=FMA:61941 }
• optic radiation has related synonym railroad nystagmus { database cross reference=http://en.wikipedia.org/wiki/Optic_radiation }
• optic radiation database cross reference FMA:61941
• optic radiation has related synonym geniculo-calcarine tract { database cross reference=http://en.wikipedia.org/wiki/Optic_radiation }
• optic radiation database cross reference http://www.snomedbrowser.com/Codes/Details/280953008
• optic radiation database cross reference http://en.wikipedia.org/wiki/Optic_radiation
• optic radiation SubClassOf radiation of cerebral hemisphere
• optic radiation has related synonym genicula-celcarine tract { database cross reference=http://en.wikipedia.org/wiki/Optic_radiation }

New Class : planum temporale

• planum temporale label planum temporale
• planum temporale database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2333
• planum temporale SubClassOf part of some temporal lobe
• planum temporale has related synonym PLT { database cross reference=HBA:PLT , has synonym type=abbreviation }
• planum temporale SubClassOf regional part of telencephalon
• planum temporale definition The planum temporale is the cortical area just posterior to the auditory cortex within the Sylvian fissure. It is a triangular region which forms the heart of Wernicke’s area, one of the most important functional areas for language. The planum temporale shows a significant asymmetry. In 65% of all individuals the left planum temporale appears to be more developed, while the right planum temporale is more developed in only 10%. In some peoplebs brains, the planum temporale is more than five times larger on the left than on the right, making it the most asymmetrical structure in the brain. This greater size of the left planum temporale compared with the right is already present in the foetus, where it can be observed starting from the 31st week of gestation. This observation strengthens the hypothesis of a genetic predisposition for brain asymmetry. { database cross reference=http://en.wikipedia.org/wiki/Planum_temporale }
• planum temporale has obo namespace uberon
• planum temporale database cross reference DHBA:PLT
• planum temporale database cross reference HBA:PLT
• planum temporale database cross reference http://en.wikipedia.org/wiki/Planum_temporale
• planum temporale id UBERON:0022268

New Class : radiation of cerebral hemisphere

• radiation of cerebral hemisphere has obo namespace uberon
• radiation of cerebral hemisphere SubClassOf cerebral hemisphere white matter
• radiation of cerebral hemisphere SubClassOf radiation of neuraxis
• radiation of cerebral hemisphere SubClassOf part of some cerebral hemisphere white matter
• radiation of cerebral hemisphere database cross reference FMA:61940
• radiation of cerebral hemisphere SubClassOf part of some cerebral hemisphere
• radiation of cerebral hemisphere EquivalentTo radiation of neuraxis and part of some cerebral hemisphere
• radiation of cerebral hemisphere has exact synonym cerebral hemisphere radiation { database cross reference=FMA:61940 }
• radiation of cerebral hemisphere label radiation of cerebral hemisphere
• radiation of cerebral hemisphere id UBERON:0022260

New Class : entorhinal cortex layer 4

• entorhinal cortex layer 4 SubClassOf central nervous system cell part cluster
• entorhinal cortex layer 4 has obo namespace uberon
• entorhinal cortex layer 4 id UBERON:0022323
• entorhinal cortex layer 4 SubClassOf nervous system cell part layer
• entorhinal cortex layer 4 SubClassOf structure with developmental contribution from neural crest
• entorhinal cortex layer 4 has related synonym entorhinal cortex layer IV { database cross reference=NIF_GrossAnatomy:nlx_39987 }
• entorhinal cortex layer 4 has related synonym layer 4 of entorhinal cortex { database cross reference=NIF_GrossAnatomy:nlx_39987 }
• entorhinal cortex layer 4 definition Layer of entorhinal cortex lying superficial to layer 5 and deep to layer 3, that is relatively acellular. (Paxinos, The rat nervous system, Academic Press, 1995, pg 473-474). { database cross reference=NIF_GrossAnatomy:nlx_39987 }
• entorhinal cortex layer 4 label entorhinal cortex layer 4
• entorhinal cortex layer 4 SubClassOf part of some entorhinal cortex
• entorhinal cortex layer 4 database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_39987
• entorhinal cortex layer 4 has related synonym lamina dessicans of entorhinal cortex { database cross reference=NIF_GrossAnatomy:nlx_39987 }

New Class : dorsal cochlear nucleus pyramidal cell layer

• dorsal cochlear nucleus pyramidal cell layer id UBERON:0022320
• dorsal cochlear nucleus pyramidal cell layer label dorsal cochlear nucleus pyramidal cell layer
• dorsal cochlear nucleus pyramidal cell layer SubClassOf part of some dorsal cochlear nucleus
• dorsal cochlear nucleus pyramidal cell layer has obo namespace uberon
• dorsal cochlear nucleus pyramidal cell layer database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_153848
• dorsal cochlear nucleus pyramidal cell layer SubClassOf central nervous system cell part cluster
• dorsal cochlear nucleus pyramidal cell layer SubClassOf structure with developmental contribution from neural crest
• dorsal cochlear nucleus pyramidal cell layer SubClassOf nervous system cell part layer

New Class : entorhinal cortex layer 3

• entorhinal cortex layer 3 SubClassOf part of some entorhinal cortex
• entorhinal cortex layer 3 SubClassOf nervous system cell part layer
• entorhinal cortex layer 3 has obo namespace uberon
• entorhinal cortex layer 3 in subset defined by cytoarchitecture
• entorhinal cortex layer 3 definition Layer of the entorhinal cortex lying superficial to layer 4and deep to layer 2. It is characterized by cells of various sizes and shapes with a predominance of pyramidal cells (Adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 474) { database cross reference=NIF_GrossAnatomy:nlx_93650 }
• entorhinal cortex layer 3 SubClassOf central nervous system cell part cluster
• entorhinal cortex layer 3 id UBERON:0022327
• entorhinal cortex layer 3 has related synonym entorhinal cortex layer III { database cross reference=NIF_GrossAnatomy:nlx_93650 }
• entorhinal cortex layer 3 database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_93650
• entorhinal cortex layer 3 SubClassOf structure with developmental contribution from neural crest
• entorhinal cortex layer 3 label entorhinal cortex layer 3
• entorhinal cortex layer 3 has related synonym layer 3 of entorhinal cortex { database cross reference=NIF_GrossAnatomy:nlx_93650 }

New Class : molecular layer of dorsal cochlear nucleus

• molecular layer of dorsal cochlear nucleus SubClassOf central nervous system cell part cluster
• molecular layer of dorsal cochlear nucleus SubClassOf regional part of cochlear nuclear complex
• molecular layer of dorsal cochlear nucleus has obo namespace uberon
• molecular layer of dorsal cochlear nucleus SubClassOf part of some dorsal cochlear nucleus
• molecular layer of dorsal cochlear nucleus has related synonym dorsal cochlear nucleus molecular layer { database cross reference=NIF_GrossAnatomy:nlx_89 }
• molecular layer of dorsal cochlear nucleus id UBERON:0022326
• molecular layer of dorsal cochlear nucleus SubClassOf nervous system cell part layer
• molecular layer of dorsal cochlear nucleus has related synonym MoC { has synonym type=abbreviation }
• molecular layer of dorsal cochlear nucleus label molecular layer of dorsal cochlear nucleus
• molecular layer of dorsal cochlear nucleus database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_89

New Class : entorhinal cortex layer 5

• entorhinal cortex layer 5 in subset defined by cytoarchitecture
• entorhinal cortex layer 5 SubClassOf structure with developmental contribution from neural crest
• entorhinal cortex layer 5 definition Layer of entorhinal cortex lying superficial to layer 6 and deep to layer 4 characterized by large pyramidal neurons that are darkly stained in Nissl preparations (Adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 474) { database cross reference=NIF_GrossAnatomy:nlx_58 }
• entorhinal cortex layer 5 id UBERON:0022325
• entorhinal cortex layer 5 has obo namespace uberon
• entorhinal cortex layer 5 label entorhinal cortex layer 5
• entorhinal cortex layer 5 SubClassOf part of some entorhinal cortex
• entorhinal cortex layer 5 SubClassOf nervous system cell part layer
• entorhinal cortex layer 5 SubClassOf central nervous system cell part cluster
• entorhinal cortex layer 5 database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_58

New Class : entorhinal cortex layer 6

• entorhinal cortex layer 6 has obo namespace uberon
• entorhinal cortex layer 6 has related synonym layer 6 region of entorhinal cortex { database cross reference=NIF_GrossAnatomy:nlx_98 }
• entorhinal cortex layer 6 definition Layer of entorhinal cortex lying superficial to the cerebral white matter and deep to layer 5 characterized by cells of various shapes and sizes (Adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 474) { database cross reference=NIF_GrossAnatomy:nlx_98 }
• entorhinal cortex layer 6 SubClassOf central nervous system cell part cluster
• entorhinal cortex layer 6 id UBERON:0022329
• entorhinal cortex layer 6 SubClassOf part of some entorhinal cortex
• entorhinal cortex layer 6 database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_98
• entorhinal cortex layer 6 in subset defined by cytoarchitecture
• entorhinal cortex layer 6 label entorhinal cortex layer 6
• entorhinal cortex layer 6 SubClassOf nervous system cell part layer
• entorhinal cortex layer 6 has related synonym entorhinal cortex layer VI { database cross reference=NIF_GrossAnatomy:nlx_98 }
• entorhinal cortex layer 6 SubClassOf structure with developmental contribution from neural crest

New Class : superior colliculus stratum zonale

• superior colliculus stratum zonale id UBERON:0022314
• superior colliculus stratum zonale SubClassOf nervous system cell part layer
• superior colliculus stratum zonale label superior colliculus stratum zonale
• superior colliculus stratum zonale SubClassOf central nervous system cell part cluster
• superior colliculus stratum zonale SubClassOf part of some superior colliculus
• superior colliculus stratum zonale has obo namespace uberon
• superior colliculus stratum zonale has related synonym stratum zonale { database cross reference=NIF_GrossAnatomy:nlx_144108 }
• superior colliculus stratum zonale in subset defined by cytoarchitecture
• superior colliculus stratum zonale has related synonym zonal layer of superior colliculus { database cross reference=NIF_GrossAnatomy:nlx_144108 }
• superior colliculus stratum zonale database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_144108
• superior colliculus stratum zonale definition Most superficial layer of the superior colliculus consisting primarily of thin fibers derived primarily from the occipital cortex (Brodal, Neurological Anatomy, 2nd 3d, 1981, pg. 544) { database cross reference=NIF_GrossAnatomy:nlx_144108 }

New Class : primary motor cortex layer 6

• primary motor cortex layer 6 has related synonym primary motor cortex lamina 6 { database cross reference=NIF_GrossAnatomy:nlx_144264 }
• primary motor cortex layer 6 id UBERON:0022316
• primary motor cortex layer 6 label primary motor cortex layer 6
• primary motor cortex layer 6 SubClassOf part of some cortical layer VI
• primary motor cortex layer 6 has related synonym primary motor cortex lamina VI { database cross reference=NIF_GrossAnatomy:nlx_144264 }
• primary motor cortex layer 6 SubClassOf central nervous system cell part cluster
• primary motor cortex layer 6 SubClassOf structure with developmental contribution from neural crest
• primary motor cortex layer 6 SubClassOf part of some primary motor cortex
• primary motor cortex layer 6 has related synonym primary motor cortex layer VI { database cross reference=NIF_GrossAnatomy:nlx_144264 }
• primary motor cortex layer 6 SubClassOf nervous system cell part layer
• primary motor cortex layer 6 has obo namespace uberon
• primary motor cortex layer 6 database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_144264
• primary motor cortex layer 6 definition Lamina of primary motor cortex { database cross reference=NIF_GrossAnatomy:nlx_144264 }

New Class : primary motor cortex layer 5

• primary motor cortex layer 5 SubClassOf central nervous system cell part cluster
• primary motor cortex layer 5 SubClassOf structure with developmental contribution from neural crest
• primary motor cortex layer 5 has related synonym primary motor cortex layer V { database cross reference=NIF_GrossAnatomy:nlx_144263 }
• primary motor cortex layer 5 label primary motor cortex layer 5
• primary motor cortex layer 5 database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_144263
• primary motor cortex layer 5 id UBERON:0022315
• primary motor cortex layer 5 SubClassOf part of some primary motor cortex
• primary motor cortex layer 5 definition Lamina of primary motor cortex { database cross reference=NIF_GrossAnatomy:nlx_144263 }
• primary motor cortex layer 5 has related synonym primary motor cortex lamina V { database cross reference=NIF_GrossAnatomy:nlx_144263 }
• primary motor cortex layer 5 SubClassOf part of some cortical layer V
• primary motor cortex layer 5 SubClassOf nervous system cell part layer
• primary motor cortex layer 5 has obo namespace uberon

New Class : olfactory cortex layer 2

• olfactory cortex layer 2 has related synonym layer 2 of olfactory cortex { database cross reference=NIF_GrossAnatomy:nlx_152610 }
• olfactory cortex layer 2 has obo namespace uberon
• olfactory cortex layer 2 in subset defined by cytoarchitecture
• olfactory cortex layer 2 SubClassOf central nervous system cell part cluster
• olfactory cortex layer 2 SubClassOf part of some olfactory cortex
• olfactory cortex layer 2 label olfactory cortex layer 2
• olfactory cortex layer 2 database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_152610
• olfactory cortex layer 2 definition Middle layer of olfactory cortex lying deep to layer 1 and superficial to layer 3, characterized by a compact layer of cell bodies. It can be divided into a superficial part and a deep part. { database cross reference=NIF_GrossAnatomy:nlx_152610 }
• olfactory cortex layer 2 SubClassOf nervous system cell part layer
• olfactory cortex layer 2 SubClassOf structure with developmental contribution from neural crest
• olfactory cortex layer 2 id UBERON:0022318

New Class : olfactory cortex layer 1

• olfactory cortex layer 1 SubClassOf part of some olfactory cortex
• olfactory cortex layer 1 SubClassOf nervous system cell part layer
• olfactory cortex layer 1 has related synonym olfactory cortex plexiform layer { database cross reference=NIF_GrossAnatomy:nlx_152609 }
• olfactory cortex layer 1 SubClassOf structure with developmental contribution from neural crest
• olfactory cortex layer 1 SubClassOf central nervous system cell part cluster
• olfactory cortex layer 1 has obo namespace uberon
• olfactory cortex layer 1 label olfactory cortex layer 1
• olfactory cortex layer 1 id UBERON:0022317
• olfactory cortex layer 1 database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_152609
• olfactory cortex layer 1 definition Surface layer of the olfactory cortex that contains dendrites, fiber systems and a small number of neurons. It has been divided into a superficial part and a deep part. { database cross reference=NIF_GrossAnatomy:nlx_152609 }
• olfactory cortex layer 1 has related synonym layer 1 of olfactory cortex { database cross reference=NIF_GrossAnatomy:nlx_152609 }

New Class : lateral geniculate nucleus parvocellular layer

• lateral geniculate nucleus parvocellular layer database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_152619
• lateral geniculate nucleus parvocellular layer SubClassOf central nervous system cell part cluster
• lateral geniculate nucleus parvocellular layer has exact synonym LGN P-cell layer { database cross reference=NIF_GrossAnatomy:nlx_152619 }
• lateral geniculate nucleus parvocellular layer SubClassOf part of some lateral geniculate body
• lateral geniculate nucleus parvocellular layer label lateral geniculate nucleus parvocellular layer
• lateral geniculate nucleus parvocellular layer definition Layer of the lateral geniculate nucleus characterized by small cells (adapted from http://en.wikipedia.org/wiki/ https://en.wikipedia.org/wiki/Lateral_geniculate_nucleus) { database cross reference=NIF_GrossAnatomy:nlx_152619 }
• lateral geniculate nucleus parvocellular layer id UBERON:0022319
• lateral geniculate nucleus parvocellular layer has obo namespace uberon
• lateral geniculate nucleus parvocellular layer has related synonym parvocellular layer of lateral geniculate nucleus { database cross reference=NIF_GrossAnatomy:nlx_152619 }
• lateral geniculate nucleus parvocellular layer SubClassOf nervous system cell part layer

New Class : piriform cortex layer 2a

• piriform cortex layer 2a in subset defined by cytoarchitecture
• piriform cortex layer 2a has related synonym layer IIa of piriform cortex { database cross reference=NIF_GrossAnatomy:nlx_anat_091007 }
• piriform cortex layer 2a SubClassOf nervous system cell part layer
• piriform cortex layer 2a SubClassOf central nervous system cell part cluster
• piriform cortex layer 2a id UBERON:0022340
• piriform cortex layer 2a has obo namespace uberon
• piriform cortex layer 2a SubClassOf structure with developmental contribution from neural crest
• piriform cortex layer 2a has related synonym layer 2a of piriform cortex { database cross reference=NIF_GrossAnatomy:nlx_anat_091007 }
• piriform cortex layer 2a definition Superficial region of layer 2 of the piriform cortex characterized by a less dense packing of cells and a concentration of semilunar cell bodies { database cross reference=NIF_GrossAnatomy:nlx_anat_091007 }
• piriform cortex layer 2a SubClassOf part of some piriform cortex layer 2
• piriform cortex layer 2a label piriform cortex layer 2a
• piriform cortex layer 2a has related synonym piriform cortex layer IIa { database cross reference=NIF_GrossAnatomy:nlx_anat_091007 }
• piriform cortex layer 2a database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_anat_091007

New Class : piriform cortex layer 2b

• piriform cortex layer 2b SubClassOf structure with developmental contribution from neural crest
• piriform cortex layer 2b label piriform cortex layer 2b
• piriform cortex layer 2b in subset defined by cytoarchitecture
• piriform cortex layer 2b definition Deeper of two subdivisions of piriform layer 2 characterized by more densely packed cell bodies dominated by pyramidal cell bodies. { database cross reference=NIF_GrossAnatomy:nlx_anat_091008 }
• piriform cortex layer 2b SubClassOf part of some piriform cortex layer 2
• piriform cortex layer 2b id UBERON:0022341
• piriform cortex layer 2b database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_anat_091008
• piriform cortex layer 2b has obo namespace uberon
• piriform cortex layer 2b SubClassOf nervous system cell part layer
• piriform cortex layer 2b SubClassOf central nervous system cell part cluster

New Class : dentate gyrus granule cell layer outer blade

• dentate gyrus granule cell layer outer blade SubClassOf structure with developmental contribution from neural crest
• dentate gyrus granule cell layer outer blade has related synonym infrapyramidal blade of stratum granulare { database cross reference=NIF_GrossAnatomy:nlx_anat_1008006 }
• dentate gyrus granule cell layer outer blade has related synonym outer blade of stratum granulare { database cross reference=NIF_GrossAnatomy:nlx_anat_1008006 }
• dentate gyrus granule cell layer outer blade SubClassOf part of some dentate gyrus granule cell layer
• dentate gyrus granule cell layer outer blade label dentate gyrus granule cell layer outer blade
• dentate gyrus granule cell layer outer blade database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_anat_1008006
• dentate gyrus granule cell layer outer blade has obo namespace uberon
• dentate gyrus granule cell layer outer blade SubClassOf central nervous system cell part cluster
• dentate gyrus granule cell layer outer blade SubClassOf nervous system cell part layer
• dentate gyrus granule cell layer outer blade has related synonym outer blade of dentate gyrus granule cell layer { database cross reference=NIF_GrossAnatomy:nlx_anat_1008006 }
• dentate gyrus granule cell layer outer blade has related synonym exposed blade of stratum granulare { database cross reference=NIF_GrossAnatomy:nlx_anat_1008006 }
• dentate gyrus granule cell layer outer blade has related synonym infrapyramidal blade dentate gyrus granule cell layer { database cross reference=NIF_GrossAnatomy:nlx_anat_1008006 }
• dentate gyrus granule cell layer outer blade id UBERON:0022349

New Class : dentate gyrus granule cell layer inner blade

• dentate gyrus granule cell layer inner blade has related synonym inner blade of dentate gyrus granule cell layer { database cross reference=NIF_GrossAnatomy:nlx_anat_1008005 }
• dentate gyrus granule cell layer inner blade database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_anat_1008005
• dentate gyrus granule cell layer inner blade has related synonym inner blade of stratum granulare { database cross reference=NIF_GrossAnatomy:nlx_anat_1008005 }
• dentate gyrus granule cell layer inner blade SubClassOf structure with developmental contribution from neural crest
• dentate gyrus granule cell layer inner blade id UBERON:0022348
• dentate gyrus granule cell layer inner blade label dentate gyrus granule cell layer inner blade
• dentate gyrus granule cell layer inner blade has related synonym extrapyramidal blade of stratum granulare { database cross reference=NIF_GrossAnatomy:nlx_anat_1008005 }
• dentate gyrus granule cell layer inner blade SubClassOf central nervous system cell part cluster
• dentate gyrus granule cell layer inner blade has related synonym enclosed blade of stratum granulare { database cross reference=NIF_GrossAnatomy:nlx_anat_1008005 }
• dentate gyrus granule cell layer inner blade SubClassOf part of some dentate gyrus granule cell layer
• dentate gyrus granule cell layer inner blade has obo namespace uberon
• dentate gyrus granule cell layer inner blade has related synonym extrapyramidal blade dentate gyrus granule cell layer { database cross reference=NIF_GrossAnatomy:nlx_anat_1008005 }
• dentate gyrus granule cell layer inner blade SubClassOf nervous system cell part layer

New Class : dentate gyrus molecular layer inner

• dentate gyrus molecular layer inner SubClassOf structure with developmental contribution from neural crest
• dentate gyrus molecular layer inner database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_anat_1008004
• dentate gyrus molecular layer inner SubClassOf central nervous system cell part cluster
• dentate gyrus molecular layer inner id UBERON:0022347
• dentate gyrus molecular layer inner SubClassOf nervous system cell part layer
• dentate gyrus molecular layer inner has obo namespace uberon
• dentate gyrus molecular layer inner SubClassOf part of some dentate gyrus molecular layer
• dentate gyrus molecular layer inner has related synonym DG inner stratum moleculare { database cross reference=NIF_GrossAnatomy:nlx_anat_1008004 }
• dentate gyrus molecular layer inner definition Inner third of the dentate gyrus { database cross reference=NIF_GrossAnatomy:nlx_anat_1008004 }
• dentate gyrus molecular layer inner has related synonym inner layer of dentate gyrus molecular layer { database cross reference=NIF_GrossAnatomy:nlx_anat_1008004 }
• dentate gyrus molecular layer inner label dentate gyrus molecular layer inner

New Class : dentate gyrus molecular layer middle

• dentate gyrus molecular layer middle database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_anat_1008003
• dentate gyrus molecular layer middle has related synonym DG middle stratum moleculare { database cross reference=NIF_GrossAnatomy:nlx_anat_1008003 }
• dentate gyrus molecular layer middle SubClassOf central nervous system cell part cluster
• dentate gyrus molecular layer middle SubClassOf nervous system cell part layer
• dentate gyrus molecular layer middle label dentate gyrus molecular layer middle
• dentate gyrus molecular layer middle has related synonym middle layer of dentate gyrus molecular layer { database cross reference=NIF_GrossAnatomy:nlx_anat_1008003 }
• dentate gyrus molecular layer middle has obo namespace uberon
• dentate gyrus molecular layer middle SubClassOf part of some dentate gyrus molecular layer
• dentate gyrus molecular layer middle id UBERON:0022346
• dentate gyrus molecular layer middle SubClassOf structure with developmental contribution from neural crest

New Class : entorhinal cortex layer 1

• entorhinal cortex layer 1 SubClassOf part of some entorhinal cortex
• entorhinal cortex layer 1 has related synonym layer I of entorhinal cortex { database cross reference=NIF_GrossAnatomy:nlx_anat_090820 }
• entorhinal cortex layer 1 has related synonym entorhinal cortex layer I { database cross reference=NIF_GrossAnatomy:nlx_anat_090820 }
• entorhinal cortex layer 1 has related synonym molecular layer of entorhinal cortex { database cross reference=NIF_GrossAnatomy:nlx_anat_090820 }
• entorhinal cortex layer 1 id UBERON:0022336
• entorhinal cortex layer 1 SubClassOf structure with developmental contribution from neural crest
• entorhinal cortex layer 1 SubClassOf nervous system cell part layer
• entorhinal cortex layer 1 has related synonym entorhinal cortex molecular layer { database cross reference=NIF_GrossAnatomy:nlx_anat_090820 }
• entorhinal cortex layer 1 SubClassOf central nervous system cell part cluster
• entorhinal cortex layer 1 label entorhinal cortex layer 1
• entorhinal cortex layer 1 in subset defined by cytoarchitecture
• entorhinal cortex layer 1 has related synonym EC layer 1 { has synonym type=abbreviation }
• entorhinal cortex layer 1 has obo namespace uberon
• entorhinal cortex layer 1 database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_anat_090820
• entorhinal cortex layer 1 definition Layer of the entorhinal cortex that is most superficial, continuous with layer 1 of adjacent neocortex and the molecular layer of the subiculum, lying deep to the pial layer and superficial to layer 2. It is relatively acellular consisting mostly of fibers running transversely relative to the cortical surface (Adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 474) { database cross reference=NIF_GrossAnatomy:nlx_anat_090820 }

New Class : entorhinal cortex layer 2

• entorhinal cortex layer 2 has related synonym layer II of entorhinal cortex { database cross reference=NIF_GrossAnatomy:nlx_anat_090821 }
• entorhinal cortex layer 2 SubClassOf part of some entorhinal cortex
• entorhinal cortex layer 2 has related synonym EC layer 2 { has synonym type=abbreviation }
• entorhinal cortex layer 2 has related synonym layer 2 of entorhinal cortex { database cross reference=NIF_GrossAnatomy:nlx_anat_090821 }
• entorhinal cortex layer 2 has related synonym entorhinal cortex layer II { database cross reference=NIF_GrossAnatomy:nlx_anat_090821 }
• entorhinal cortex layer 2 has obo namespace uberon
• entorhinal cortex layer 2 SubClassOf structure with developmental contribution from neural crest
• entorhinal cortex layer 2 database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_anat_090821
• entorhinal cortex layer 2 definition Layer of the entorhinal cortex lying superficial to layer 3 and deep to layer 1. It is characterized by medium-to large sized stellate cells that are grouped into prominent clusters, particularly in the rostral entorhinal cortex (Adapted from Paxinos, G. The rat central nervous system, 2nd ed, Academic Press, San Diego, 1995, pg. 474) { database cross reference=NIF_GrossAnatomy:nlx_anat_090821 }
• entorhinal cortex layer 2 id UBERON:0022337
• entorhinal cortex layer 2 SubClassOf central nervous system cell part cluster
• entorhinal cortex layer 2 label entorhinal cortex layer 2
• entorhinal cortex layer 2 SubClassOf nervous system cell part layer

New Class : long ciliary nerve

• long ciliary nerve database cross reference http://en.wikipedia.org/wiki/Long_ciliary_nerves
• long ciliary nerve SubClassOf nerve
• long ciliary nerve has obo namespace uberon
• long ciliary nerve database cross reference http://www.snomedbrowser.com/Codes/Details/280228003
• long ciliary nerve database cross reference FMA:52691
• long ciliary nerve has related synonym nervi ciliares longi { database cross reference=http://en.wikipedia.org/wiki/Long_ciliary_nerves , has synonym type=latin term }
• long ciliary nerve definition The long ciliary nerves, two or three in number, are given off from the nasociliary, as it crosses the optic nerve. They accompany the short ciliary nerves from the ciliary ganglion, pierce the posterior part of the sclera, and running forward between it and the choroid, are distributed to the iris and cornea. The long ciliary nerves provide sensory innervation to the eyeball. In addition, they contain sympathetic fibers from the superior cervical ganglion to the dilator pupillC& muscle. The sympathetic fibers to the dilator pupillae muscle mainly travel in the nasociliary nerve but there are also sympathetic fibers in the short ciliary nerves that pass through the ciliary ganglion without forming synapses. { database cross reference=http://en.wikipedia.org/wiki/Long_ciliary_nerves }
• long ciliary nerve has related synonym long ciliary nerve { database cross reference=http://en.wikipedia.org/wiki/Long_ciliary_nerves }
• long ciliary nerve label long ciliary nerve
• long ciliary nerve SubClassOf branching part of some nasociliary nerve
• long ciliary nerve id UBERON:0022301

New Class : nasociliary nerve

• nasociliary nerve has related synonym nervus nasociliaris { database cross reference=BTO:0001452 }
• nasociliary nerve label nasociliary nerve
• nasociliary nerve SubClassOf branching part of some frontal nerve (branch of ophthalmic)
• nasociliary nerve has obo namespace uberon
• nasociliary nerve has related synonym nasociliary { database cross reference=http://en.wikipedia.org/wiki/Nasociliary_nerve }
• nasociliary nerve id UBERON:0022300
• nasociliary nerve database cross reference FMA:52668
• nasociliary nerve SubClassOf part of some ophthalmic nerve
• nasociliary nerve SubClassOf nerve
• nasociliary nerve database cross reference http://en.wikipedia.org/wiki/Nasociliary_nerve
• nasociliary nerve has exact synonym nasal nerve { database cross reference=BTO:0001452 }
• nasociliary nerve database cross reference http://www.snomedbrowser.com/Codes/Details/280220005
• nasociliary nerve database cross reference BTO:0001452
• nasociliary nerve definition The nasociliary nerve is a branch of the ophthalmic nerve. It is intermediate in size between the two other main branches of the ophthalmic nerve, the frontal nerve and the lacrimal nerve, and is more deeply placed. { database cross reference=http://en.wikipedia.org/wiki/Nasociliary_nerve }
• nasociliary nerve has related synonym nasociliary nerve { database cross reference=BTO:0001452 }

New Class : short ciliary nerve

• short ciliary nerve database cross reference FMA:7041
• short ciliary nerve SubClassOf parasympathetic nerve
• short ciliary nerve label short ciliary nerve
• short ciliary nerve has related synonym short ciliary nerve { database cross reference=http://en.wikipedia.org/wiki/Short_ciliary_nerves }
• short ciliary nerve database cross reference http://en.wikipedia.org/wiki/Short_ciliary_nerves
• short ciliary nerve SubClassOf neural crest-derived structure
• short ciliary nerve definition The branches of the ciliary ganglion are the short ciliary nerves. These are delicate filaments, from six to ten in number, which arise from the forepart of the ganglion in two bundles connected with its superior and inferior angles; the lower bundle is the larger. They run forward with the ciliary arteries in a wavy course, one set above and the other below the optic nerve, and are accompanied by the long ciliary nerves from the nasociliary. They pierce the sclera at the back part of the bulb of the eye, pass forward in delicate grooves on the inner surface of the sclera, and are distributed to the Ciliaris muscle, iris, and cornea. The short ciliary nerve contains parasympathetic and sympathetic nerve fibers. The parasympathetics arise from the Edinger-Westphal nucleus and synapse in the ciliary ganglion via the oculomotor nerve, the postganglionic parasympathetics leave the ciliary ganglion in the short ciliary nerve and supply the ciliary body and iris. Sympathetics are provided by the superior cervical ganglion and they reach the ganglion either as branches of the nasociliary nerve or directly from the extension of the plexus on the ophthalmic artery (sympathetic branch to ciliary ganglion). Damage to the short ciliary nerve may result in loss of the pupillary light reflex, or mydriasis. { database cross reference=http://en.wikipedia.org/wiki/Short_ciliary_nerves }
• short ciliary nerve has exact synonym lower branch of ciliary ganglion { database cross reference=FMA:7041 }
• short ciliary nerve id UBERON:0022302
• short ciliary nerve database cross reference http://www.snomedbrowser.com/Codes/Details/417598000
• short ciliary nerve has related synonym nervi ciliares breves { database cross reference=http://en.wikipedia.org/wiki/Short_ciliary_nerves , has synonym type=latin term }
• short ciliary nerve has obo namespace uberon
• short ciliary nerve SubClassOf branching part of some ciliary ganglion

New Class : nervous system cell part layer

• nervous system cell part layer has broad synonym layer { database cross reference=CUMBO:CUMBO }
• nervous system cell part layer has broad synonym lamina { database cross reference=CUMBO:CUMBO }
• nervous system cell part layer in subset cumbo
• nervous system cell part layer label nervous system cell part layer
• nervous system cell part layer SubClassOf part of some nervous system
• nervous system cell part layer definition Single layer of a laminar structure, identified by different density, arrangement or size of cells and processes arranged in flattened layers or lamina[CUMBO]. { database cross reference=NIF_GrossAnatomy:nlx_149357 }
• nervous system cell part layer id UBERON:0022303
• nervous system cell part layer database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_149357
• nervous system cell part layer has obo namespace uberon
• nervous system cell part layer SubClassOf multi cell part structure

New Class : posterior amygdaloid nucleus

• posterior amygdaloid nucleus SubClassOf part of some amygdala
• posterior amygdaloid nucleus SubClassOf telencephalic nucleus
• posterior amygdaloid nucleus database cross reference ABA:PA
• posterior amygdaloid nucleus has exact synonym posterior amygdalar nucleus { database cross reference=ABA:PA }
• posterior amygdaloid nucleus label posterior amygdaloid nucleus
• posterior amygdaloid nucleus database cross reference EMAPA:35694
• posterior amygdaloid nucleus has obo namespace uberon
• posterior amygdaloid nucleus database cross reference MA:0002928
• posterior amygdaloid nucleus id UBERON:0022229

New Class : meibum

• meibum SubClassOf adjacent to some eyeball of camera-type eye
• meibum function notes provides barrier to prevent dessication of cornea[ISBN10:0123813611]
• meibum SubClassOf sebum
• meibum EquivalentTo sebum and produced by some tarsal gland
• meibum location notes part of surface lipid layer of tear film
• meibum SubClassOf part of some camera-type eye
• meibum id UBERON:0019315
• meibum definition an oily substance that prevents evaporation of the eye’s tear film { database cross reference=http://www.ncbi.nlm.nih.gov/pubmed/20664693 }
• meibum has obo namespace uberon
• meibum label meibum
• meibum has related synonym tarsal gland secretion
• meibum SubClassOf produced by some tarsal gland

New Class : epifascicular nucleus

• epifascicular nucleus label epifascicular nucleus
• epifascicular nucleus has obo namespace uberon
• epifascicular nucleus database cross reference DHBA:EF
• epifascicular nucleus database cross reference HBA:EF
• epifascicular nucleus id UBERON:0019314
• epifascicular nucleus database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1118
• epifascicular nucleus SubClassOf regional part of brain
• epifascicular nucleus SubClassOf structure with developmental contribution from neural crest
• epifascicular nucleus SubClassOf part of some myelencephalon

New Class : exocrine gland of integumental system

• exocrine gland of integumental system has exact synonym integumental exocrine gland { database cross reference=UBERON:cjm }
• exocrine gland of integumental system SubClassOf exocrine gland
• exocrine gland of integumental system has obo namespace uberon
• exocrine gland of integumental system SubClassOf gland of integumental system
• exocrine gland of integumental system EquivalentTo exocrine gland and part of some integumental system
• exocrine gland of integumental system SubClassOf part of some integumental system
• exocrine gland of integumental system has exact synonym integumental system exocrine gland { database cross reference=UBERON:cjm }
• exocrine gland of integumental system definition An exocrine gland that is part of a integumental system. { database cross reference=GOC:dos , database cross reference=UBERON:cjm }
• exocrine gland of integumental system id UBERON:0019319
• exocrine gland of integumental system label exocrine gland of integumental system

New Class : root of olfactory nerve

• root of olfactory nerve definition The initial segment of an olfactory nerve, leaving the central nervous system. { database cross reference=UBERON:cjm }
• root of olfactory nerve has obo namespace uberon
• root of olfactory nerve has exact synonym olfactory nerve root { database cross reference=NIF_GrossAnatomy:birnlex_1632 }
• root of olfactory nerve id UBERON:0019311
• root of olfactory nerve label root of olfactory nerve
• root of olfactory nerve EquivalentTo nerve root and continuous with some olfactory nerve
• root of olfactory nerve SubClassOf continuous with some olfactory nerve
• root of olfactory nerve database cross reference http://uri.neuinfo.org/nif/nifstd/birnlex_1632
• root of olfactory nerve SubClassOf root of cranial nerve

New Class : ventrolateral nucleus of solitary tract

• ventrolateral nucleus of solitary tract database cross reference http://uri.neuinfo.org/nif/nifstd/birnlex_2664
• ventrolateral nucleus of solitary tract has exact synonym ventrolateral subnucleus of solitary tract { database cross reference=NIF_GrossAnatomy:birnlex_2664 , has synonym type=preferred term when talking about an instance of this class in Homo sapiens }
• ventrolateral nucleus of solitary tract has exact synonym ventrolateral subnucleus of solitary tract, left { database cross reference=HBA:SolVL }
• ventrolateral nucleus of solitary tract database cross reference DHBA:SolVL
• ventrolateral nucleus of solitary tract database cross reference HBA:SolVL
• ventrolateral nucleus of solitary tract SubClassOf nucleus of solitary tract
• ventrolateral nucleus of solitary tract has obo namespace uberon
• ventrolateral nucleus of solitary tract has related synonym nucleus of the solitary tract, ventrolateral part { database cross reference=NIF_GrossAnatomy:birnlex_2664 }
• ventrolateral nucleus of solitary tract database cross reference FMA:229583
• ventrolateral nucleus of solitary tract id UBERON:0019312
• ventrolateral nucleus of solitary tract label ventrolateral nucleus of solitary tract

New Class : glossopharyngeal nerve root

• glossopharyngeal nerve root database cross reference http://uri.neuinfo.org/nif/nifstd/birnlex_1533
• glossopharyngeal nerve root EquivalentTo nerve root and continuous with some glossopharyngeal nerve
• glossopharyngeal nerve root id UBERON:0019310
• glossopharyngeal nerve root SubClassOf continuous with some glossopharyngeal nerve
• glossopharyngeal nerve root database cross reference DMBA:9n
• glossopharyngeal nerve root label glossopharyngeal nerve root
• glossopharyngeal nerve root has exact synonym glossopharyngeal nerve root { database cross reference=NIF_GrossAnatomy:birnlex_1533 }
• glossopharyngeal nerve root SubClassOf central nervous system cell part cluster
• glossopharyngeal nerve root has obo namespace uberon
• glossopharyngeal nerve root SubClassOf structure with developmental contribution from neural crest
• glossopharyngeal nerve root SubClassOf root of cranial nerve
• glossopharyngeal nerve root SubClassOf part of some medulla oblongata
• glossopharyngeal nerve root database cross reference DHBA:r9

New Class : occipital sulcus

• occipital sulcus has obo namespace uberon
• occipital sulcus database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Occipital_Sulcus
• occipital sulcus database cross reference http://www.snomedbrowser.com/Codes/Details/314148004
• occipital sulcus id UBERON:0019303
• occipital sulcus has exact synonym occipital lobe sulcus
• occipital sulcus SubClassOf sulcus of brain
• occipital sulcus EquivalentTo sulcus of brain and part of some occipital lobe
• occipital sulcus SubClassOf part of some occipital lobe
• occipital sulcus label occipital sulcus
• occipital sulcus database cross reference HBA:OLs
• occipital sulcus database cross reference http://linkedlifedata.com/resource/umls/id/C1518530

New Class : sensory organ epithelium

• sensory organ epithelium database cross reference MA:0003174
• sensory organ epithelium database cross reference EMAPA:35952
• sensory organ epithelium has obo namespace uberon
• sensory organ epithelium label sensory organ epithelium
• sensory organ epithelium EquivalentTo epithelium and part of some sense organ
• sensory organ epithelium SubClassOf epithelium
• sensory organ epithelium SubClassOf part of some sense organ
• sensory organ epithelium id UBERON:0019304

New Class : nose epithelium

• nose epithelium has obo namespace uberon
• nose epithelium id UBERON:0019306
• nose epithelium database cross reference MA:0003171
• nose epithelium label nose epithelium
• nose epithelium SubClassOf ecto-epithelium
• nose epithelium SubClassOf respiratory system epithelium
• nose epithelium SubClassOf sensory organ epithelium
• nose epithelium database cross reference EMAPA:35958
• nose epithelium EquivalentTo epithelium and part of some olfactory apparatus
• nose epithelium SubClassOf part of some olfactory apparatus

New Class : epithelium of external nose

• epithelium of external nose SubClassOf nose epithelium
• epithelium of external nose database cross reference FMA:63143
• epithelium of external nose EquivalentTo epithelium and part of some external nose
• epithelium of external nose SubClassOf part of some external nose
• epithelium of external nose label epithelium of external nose
• epithelium of external nose SubClassOf keratinized stratified squamous epithelium
• epithelium of external nose has exact synonym epithelium of skin of external nose { database cross reference=FMA:63143 }
• epithelium of external nose id UBERON:0019307
• epithelium of external nose has obo namespace uberon

New Class : septohypothalamic nucleus

• septohypothalamic nucleus definition The term septohypothalamic nucleus refers to a group of cells located between the lateral septal nucleus and the anterior commissure in the mouse ( Paxinos-2001 ). Some authors regard it as part of the lateral septal nucleus ( Swanson-1998 ). { database cross reference=http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1175 }
• septohypothalamic nucleus database cross reference DMBA:SHy
• septohypothalamic nucleus has related synonym SHy { database cross reference=DHBA:SHy , has synonym type=abbreviation }
• septohypothalamic nucleus id UBERON:0019308
• septohypothalamic nucleus SubClassOf regional part of telencephalon
• septohypothalamic nucleus database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1175
• septohypothalamic nucleus label septohypothalamic nucleus
• septohypothalamic nucleus SubClassOf part of some septal nuclear complex
• septohypothalamic nucleus database cross reference DHBA:SHy
• septohypothalamic nucleus has obo namespace uberon

New Class : palpebral lobe of lacrimal gland

• palpebral lobe of lacrimal gland database cross reference FMA:59384
• palpebral lobe of lacrimal gland label palpebral lobe of lacrimal gland
• palpebral lobe of lacrimal gland definition Smaller of the two lacrimal gland lobes located at the eyelid. { database cross reference=ISBN10:0123813611 }
• palpebral lobe of lacrimal gland has obo namespace uberon
• palpebral lobe of lacrimal gland id UBERON:0019328
• palpebral lobe of lacrimal gland has exact synonym palpebral part of lacrimal gland { database cross reference=FMA:59384 }
• palpebral lobe of lacrimal gland database cross reference http://www.snomedbrowser.com/Codes/Details/280622008
• palpebral lobe of lacrimal gland SubClassOf lobe of lacrimal gland

New Class : intraorbital lacrimal gland

• intraorbital lacrimal gland has obo namespace uberon
• intraorbital lacrimal gland definition A lacrimal gland located superficially at the lateral canthus, where both the lacrimal gland and Harderian gland ducts open. { database cross reference=ISBN10:0123813611 , database cross reference=MGI:anna }
• intraorbital lacrimal gland database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Rat_Intraorbital_Lacrimal_Gland
• intraorbital lacrimal gland database cross reference MA:0003109
• intraorbital lacrimal gland database cross reference http://linkedlifedata.com/resource/umls/id/C1882706
• intraorbital lacrimal gland id UBERON:0019324
• intraorbital lacrimal gland label intraorbital lacrimal gland
• intraorbital lacrimal gland SubClassOf lacrimal gland

New Class : exorbital lacrimal gland

• exorbital lacrimal gland label exorbital lacrimal gland
• exorbital lacrimal gland database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Rat_Extraorbital_Lacrimal_Gland
• exorbital lacrimal gland database cross reference http://linkedlifedata.com/resource/umls/id/C1882664
• exorbital lacrimal gland has obo namespace uberon
• exorbital lacrimal gland has related synonym extraorbital gland
• exorbital lacrimal gland id UBERON:0019325
• exorbital lacrimal gland has exact synonym exorbital lacrimal gland { database cross reference=MGI:anna }
• exorbital lacrimal gland taxon notes more than 10% of rat exorbital gland appears to be composed of harderian gland-like cells by 22 months of age (Coujard 1974; Sashima et al. 1989).[PMID:7559104]
• exorbital lacrimal gland has related synonym extraorbital lacrimal gland
• exorbital lacrimal gland database cross reference MA:0003110
• exorbital lacrimal gland definition A lacrimal gland located subcutaneously at the anteroventral base of the ear adjacent to the parotid gland. { database cross reference=ISBN10:0123813611 , database cross reference=MGI:anna }
• exorbital lacrimal gland has related synonym exorbital gland
• exorbital lacrimal gland SubClassOf lacrimal gland

New Class : lobe of lacrimal gland

• lobe of lacrimal gland has exact synonym zone of lacrimal gland { database cross reference=FMA:59381 }
• lobe of lacrimal gland taxon notes In humans the lacrimal gland consists of two contiguous lobes [ISBN10:0123813611]
• lobe of lacrimal gland id UBERON:0019326
• lobe of lacrimal gland SubClassOf anatomical lobe
• lobe of lacrimal gland has exact synonym lacrimal gland zone { database cross reference=FMA:59381 }
• lobe of lacrimal gland has obo namespace uberon
• lobe of lacrimal gland database cross reference FMA:59381
• lobe of lacrimal gland definition An anatomical lobe that is part of a lacrimal gland { database cross reference=UBERON:cjm }
• lobe of lacrimal gland label lobe of lacrimal gland

New Class : orbital lobe of lacrimal gland

• orbital lobe of lacrimal gland database cross reference FMA:59383
• orbital lobe of lacrimal gland label orbital lobe of lacrimal gland
• orbital lobe of lacrimal gland id UBERON:0019327
• orbital lobe of lacrimal gland SubClassOf lobe of lacrimal gland
• orbital lobe of lacrimal gland definition Larger of the two lacrimal gland lobes located superficially. { database cross reference=ISBN10:0123813611 }
• orbital lobe of lacrimal gland has exact synonym orbital part of lacrimal gland { database cross reference=FMA:59383 }
• orbital lobe of lacrimal gland database cross reference http://www.snomedbrowser.com/Codes/Details/280621001
• orbital lobe of lacrimal gland has obo namespace uberon
• orbital lobe of lacrimal gland has exact synonym pars orbitalis (glandula lacrimalis) { database cross reference=FMA:59383 }

New Class : precordial region

• precordial region SubClassOf subdivision of trunk
• precordial region database cross reference http://www.snomedbrowser.com/Codes/Details/279231003
• precordial region label precordial region
• precordial region has obo namespace uberon
• precordial region id UBERON:0019320
• precordial region has exact synonym precordial region { database cross reference=FMA:12824 }
• precordial region has exact synonym precordium { database cross reference=FMA:12824 }
• precordial region SubClassOf part of some thoracic segment of trunk
• precordial region database cross reference FMA:12824
• precordial region definition A subdivision of the trunk that is comprised of the epigastrium and the anterior lower thorax. { database cross reference=UBERON:MAH }

New Class : commissure of telencephalon

• commissure of telencephalon SubClassOf structure with developmental contribution from neural crest
• commissure of telencephalon SubClassOf part of some telencephalon
• commissure of telencephalon id UBERON:0019294
• commissure of telencephalon label commissure of telencephalon
• commissure of telencephalon has exact synonym telencephalic commissures { database cross reference=HBA:TELCom }
• commissure of telencephalon has obo namespace uberon
• commissure of telencephalon EquivalentTo nervous system commissure and part of some telencephalon
• commissure of telencephalon SubClassOf brain commissure
• commissure of telencephalon database cross reference HBA:TELCom

New Class : caudal intralaminar nuclear group

• caudal intralaminar nuclear group has obo namespace uberon
• caudal intralaminar nuclear group id UBERON:0019295
• caudal intralaminar nuclear group has exact synonym caudal group of intralaminar nuclei { database cross reference=HBA:ILc }
• caudal intralaminar nuclear group has related synonym posterior intralaminar nucleus of the thalamus { database cross reference=NeuroNames:1762 }
• caudal intralaminar nuclear group database cross reference DHBA:PILN
• caudal intralaminar nuclear group database cross reference HBA:ILc
• caudal intralaminar nuclear group database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1762
• caudal intralaminar nuclear group SubClassOf nucleus of dorsal thalamus
• caudal intralaminar nuclear group has related synonym ILc { database cross reference=HBA:ILc , has synonym type=abbreviation }
• caudal intralaminar nuclear group label caudal intralaminar nuclear group
• caudal intralaminar nuclear group SubClassOf part of some intralaminar nuclear group
• caudal intralaminar nuclear group has exact synonym posterior group of intralaminar nuclei { database cross reference=DHBA:PILN }
• caudal intralaminar nuclear group has related synonym posterior intralaminar thalamic nucleus { database cross reference=NeuroNames:1762 }

New Class : accessory olfactory bulb external plexiform layer

• accessory olfactory bulb external plexiform layer has obo namespace uberon
• accessory olfactory bulb external plexiform layer SubClassOf part of some accessory olfactory bulb
• accessory olfactory bulb external plexiform layer id UBERON:0019289
• accessory olfactory bulb external plexiform layer database cross reference DMBA:AOPl
• accessory olfactory bulb external plexiform layer database cross reference MA:0002932
• accessory olfactory bulb external plexiform layer label accessory olfactory bulb external plexiform layer
• accessory olfactory bulb external plexiform layer SubClassOf olfactory bulb layer
• accessory olfactory bulb external plexiform layer has exact synonym AOB, outer plexiform layer { database cross reference=DMBA:AOPl }
• accessory olfactory bulb external plexiform layer database cross reference EMAPA:35107

New Class : rhombomere 10

• rhombomere 10 has exact synonym r10 { database cross reference=DMBA:r10 , has synonym type=abbreviation }
• rhombomere 10 has obo namespace uberon
• rhombomere 10 label rhombomere 10
• rhombomere 10 id UBERON:0019285
• rhombomere 10 database cross reference DMBA:r10
• rhombomere 10 SubClassOf rhombomere

New Class : rhombomere 11

• rhombomere 11 label rhombomere 11
• rhombomere 11 SubClassOf rhombomere
• rhombomere 11 has exact synonym r11 { database cross reference=DMBA:r11 , has synonym type=abbreviation }
• rhombomere 11 id UBERON:0019286
• rhombomere 11 has obo namespace uberon
• rhombomere 11 database cross reference DMBA:r11

New Class : rhombomere 9

• rhombomere 9 database cross reference DMBA:r9
• rhombomere 9 has obo namespace uberon
• rhombomere 9 label rhombomere 9
• rhombomere 9 id UBERON:0019284
• rhombomere 9 has exact synonym r9 { database cross reference=DMBA:r9 , has synonym type=abbreviation }
• rhombomere 9 SubClassOf rhombomere

New Class : white matter of pontine tegmentum

• white matter of pontine tegmentum has obo namespace uberon
• white matter of pontine tegmentum database cross reference FMA:83942
• white matter of pontine tegmentum has exact synonym substantia alba tegmenti pontis { database cross reference=FMA:TA }
• white matter of pontine tegmentum SubClassOf white matter of pons
• white matter of pontine tegmentum has exact synonym white substance of pontile tegmentum { database cross reference=FMA:83942 }
• white matter of pontine tegmentum SubClassOf part of some pontine tegmentum
• white matter of pontine tegmentum has exact synonym white matter of pontile tegmentum { database cross reference=FMA:83942 }
• white matter of pontine tegmentum label white matter of pontine tegmentum
• white matter of pontine tegmentum database cross reference HBA:PoWM
• white matter of pontine tegmentum has exact synonym pontine white matter tracts { database cross reference=HBA:PoWM }
• white matter of pontine tegmentum EquivalentTo white matter and part of some pontine tegmentum
• white matter of pontine tegmentum id UBERON:0019293

New Class : white matter of pons

• white matter of pons database cross reference FMA:83940
• white matter of pons SubClassOf part of some pons
• white matter of pons SubClassOf white matter of metencephalon
• white matter of pons SubClassOf brainstem white matter
• white matter of pons EquivalentTo white matter and part of some pons
• white matter of pons label white matter of pons
• white matter of pons id UBERON:0019292
• white matter of pons has obo namespace uberon

New Class : white matter of metencephalon

• white matter of metencephalon database cross reference HBA:METWM
• white matter of metencephalon database cross reference FMA:83939
• white matter of metencephalon SubClassOf part of some metencephalon
• white matter of metencephalon label white matter of metencephalon
• white matter of metencephalon id UBERON:0019291
• white matter of metencephalon has obo namespace uberon
• white matter of metencephalon EquivalentTo white matter and part of some metencephalon
• white matter of metencephalon SubClassOf white matter of hindbrain

New Class : accessory olfactory bulb internal plexiform layer

• accessory olfactory bulb internal plexiform layer database cross reference DMBA:AIPl
• accessory olfactory bulb internal plexiform layer id UBERON:0019290
• accessory olfactory bulb internal plexiform layer database cross reference MA:0002934
• accessory olfactory bulb internal plexiform layer label accessory olfactory bulb internal plexiform layer
• accessory olfactory bulb internal plexiform layer has exact synonym AOB, internal plexiform layer { database cross reference=DMBA:AIPl }
• accessory olfactory bulb internal plexiform layer database cross reference EMAPA:35110
• accessory olfactory bulb internal plexiform layer SubClassOf part of some accessory olfactory bulb
• accessory olfactory bulb internal plexiform layer has obo namespace uberon
• accessory olfactory bulb internal plexiform layer SubClassOf olfactory bulb layer

New Class : postcoronoid bone

• postcoronoid bone SubClassOf coronoid bone
• postcoronoid bone label postcoronoid bone

New Class : precoronoid bone

• precoronoid bone SubClassOf coronoid bone
• precoronoid bone label precoronoid bone

New Class : posterior coronoid bone

• posterior coronoid bone label posterior coronoid bone
• posterior coronoid bone SubClassOf coronoid bone

New Class : anterior coronoid bone

• anterior coronoid bone SubClassOf coronoid bone
• anterior coronoid bone label anterior coronoid bone

New Class : shagreen tooth field

• shagreen tooth field SubClassOf tooth row
• shagreen tooth field label shagreen tooth field

New Class : coronoid fang

• coronoid fang label coronoid fang
• coronoid fang SubClassOf coronoid tooth

New Class : lateral parasymphysial foramen

• lateral parasymphysial foramen label lateral parasymphysial foramen
• lateral parasymphysial foramen SubClassOf parasymphysial plate

New Class : mesial parasymphysial foramen

• mesial parasymphysial foramen label mesial parasymphysial foramen
• mesial parasymphysial foramen SubClassOf parasymphysial plate

New Class : parasymphysial plate

• parasymphysial plate label parasymphysial plate
• parasymphysial plate definition Bone, often with tooth attachments, on the lingual side of the anterior of the lower jaw.
• parasymphysial plate SubClassOf bone of lower jaw

New Class : fronto-ethmoidal shield

• fronto-ethmoidal shield SubClassOf dermatocranium
• fronto-ethmoidal shield label fronto-ethmoidal shield

New Class : surangular pit line

• surangular pit line definition …a v-shaped pair of ridges, each carrying three or four smallpores Modified from Ahlberg et al. 2005
• surangular pit line label surangular pit line
• surangular pit line SubClassOf surangular bone

New Class : anterior supraorbital bone

• anterior supraorbital bone SubClassOf supraorbital bone
• anterior supraorbital bone label anterior supraorbital bone

New Class : postrostral bone

• postrostral bone label postrostral bone
• postrostral bone SubClassOf fronto-ethmoidal shield

New Class : median postrostral bone

• median postrostral bone SubClassOf postrostral bone
• median postrostral bone label median postrostral bone

New Class : bona-fide anatomical boundary

• bona-fide anatomical boundary comment One might argue that all boundaries are actually fiat in the sense that there must be some fiat element at a fine enough scale of granularity. This ontology choses to ignore this issue as below the level of granularity relevant to anatomy. (DOS121102)
• bona-fide anatomical boundary definition An anatomical boundary that corresponds to some physical discontinuity. { database cross reference=CARO:0001004 }
• bona-fide anatomical boundary database cross reference CARO:0001004
• bona-fide anatomical boundary has obo namespace uberon
• bona-fide anatomical boundary id UBERON:0010199
• bona-fide anatomical boundary SubClassOf anatomical surface
• bona-fide anatomical boundary label bona-fide anatomical boundary

New Class : auricular blood vessel

• auricular blood vessel has obo namespace uberon
• auricular blood vessel definition A blood vessel that supplies or drains an ear. { database cross reference=UBERON:cjm }
• auricular blood vessel id UBERON:0020550
• auricular blood vessel SubClassOf connected to some ear
• auricular blood vessel SubClassOf blood vessel
• auricular blood vessel database cross reference MA:0001226
• auricular blood vessel label auricular blood vessel
• auricular blood vessel EquivalentTo blood vessel and connected to some ear

New Class : accessory XI nerve nucleus

• accessory XI nerve nucleus has related synonym accessory nucleus of anterior column of spinal cord { database cross reference=NeuroNames:2003 }
• accessory XI nerve nucleus has related synonym nucleus of the spinal accessory nerve { database cross reference=NeuroNames:2003 }
• accessory XI nerve nucleus database cross reference FMA:83965
• accessory XI nerve nucleus has related synonym nucleus accessorius columnae anterioris medullae spinalis { database cross reference=NeuroNames:2003 , has synonym type=latin term }
• accessory XI nerve nucleus has exact synonym accessory neural nucleus { database cross reference=FMA:83965 }
• accessory XI nerve nucleus has obo namespace uberon
• accessory XI nerve nucleus has related synonym nucleus of accessory nerve { database cross reference=NeuroNames:2003 }
• accessory XI nerve nucleus SubClassOf nucleus of medulla oblongata
• accessory XI nerve nucleus database cross reference MA:0001033
• accessory XI nerve nucleus id UBERON:0020358
• accessory XI nerve nucleus label accessory XI nerve nucleus
• accessory XI nerve nucleus database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2003
• accessory XI nerve nucleus has related synonym nucleus of the accessory nerve { database cross reference=NeuroNames:2003 }
• accessory XI nerve nucleus SubClassOf part of some medulla oblongata
• accessory XI nerve nucleus SubClassOf cranial nerve nucleus
• accessory XI nerve nucleus has related synonym nucleus nervi accessorii { database cross reference=NeuroNames:2003 , has synonym type=latin term }

Changed Class objects: 772

Changes for: base of crypt of Lieberkuhn of large intestine

• Deleted
  • - base of crypt of lieberkuhn of large intestine label base of crypt of lieberkuhn of large intestine
• Added
  • + base of crypt of Lieberkuhn of large intestine label base of crypt of Lieberkuhn of large intestine

Changes for: wall of crypt of Lieberkuhn

• Deleted
  • - wall of crypt of lieberkuhn label wall of crypt of lieberkuhn
• Added
  • + wall of crypt of Lieberkuhn label wall of crypt of Lieberkuhn

Changes for: base of crypt of Lieberkuhn of small intestine

• Deleted
  • - base of crypt of lieberkuhn of small intestine label base of crypt of lieberkuhn of small intestine
• Added
  • + base of crypt of Lieberkuhn of small intestine label base of crypt of Lieberkuhn of small intestine

Changes for: wall of crypt of Lieberkuhn of large intestine

• Deleted
  • - wall of crypt of lieberkuhn of large intestine label wall of crypt of lieberkuhn of large intestine
• Added
  • + wall of crypt of Lieberkuhn of large intestine label wall of crypt of Lieberkuhn of large intestine

Changes for: wall of crypt of Lieberkuhn of small intestine

• Deleted
  • - wall of crypt of lieberkuhn of small intestine label wall of crypt of lieberkuhn of small intestine
• Added
  • + wall of crypt of Lieberkuhn of small intestine label wall of crypt of Lieberkuhn of small intestine

Changes for: base of crypt of Lieberkuhn

• Deleted
  • - base of crypt of lieberkuhn label base of crypt of lieberkuhn
• Added
  • + base of crypt of Lieberkuhn label base of crypt of Lieberkuhn

Changes for: lumen of esophagus

• Deleted
  • - lumen of esophagus EquivalentTo anatomical space and enclosed by some esophagus
  • - lumen of esophagus SubClassOf enclosed by some esophagus
• Added
  • + lumen of esophagus EquivalentTo anatomical space and luminal space of some esophagus
  • + lumen of esophagus SubClassOf luminal space of some esophagus

Changes for: anatomical conduit space

• Deleted
  • - anatomical conduit space SubClassOf enclosed by some anatomical conduit
• Added
  • + anatomical conduit space SubClassOf luminal space of some anatomical conduit

Changes for: jaw region

• Deleted
  • - jaw region SubClassOf has skeleton some jaw skeleton
• Added
  • + jaw region SubClassOf has skeleton some jaw skeleton

Changes for: cervical cavity

• Deleted
  • - cervical cavity EquivalentTo anatomical cavity and enclosed by some uterine cervix
  • - cervical cavity SubClassOf enclosed by some uterine cervix
• Added
  • + cervical cavity EquivalentTo anatomical cavity and luminal space of some uterine cervix
  • + cervical cavity SubClassOf luminal space of some uterine cervix

Changes for: upper jaw opening

• Deleted
  • - upper jaw opening EquivalentTo anatomical space and enclosed by some bone of upper jaw
  • - upper jaw opening SubClassOf enclosed by some bone of upper jaw
• Added
  • + upper jaw opening EquivalentTo anatomical space and luminal space of some bone of upper jaw
  • + upper jaw opening SubClassOf luminal space of some bone of upper jaw

Changes for: lower jaw opening

• Deleted
  • - lower jaw opening EquivalentTo anatomical space and enclosed by some bone of lower jaw
  • - lower jaw opening SubClassOf enclosed by some bone of lower jaw
• Added
  • + lower jaw opening EquivalentTo anatomical space and luminal space of some bone of lower jaw
  • + lower jaw opening SubClassOf luminal space of some bone of lower jaw

Changes for: manual digit 5 plus metapodial segment

• Deleted
  • - manual digit 5 plus metapodial segment SubClassOf has skeleton some manual digit 5 digitopodial skeleton
• Added
  • + manual digit 5 plus metapodial segment SubClassOf has skeleton some manual digit 5 digitopodial skeleton

Changes for: manual digit 4 plus metapodial segment

• Deleted
  • - manual digit 4 plus metapodial segment SubClassOf has skeleton some manual digit 4 digitopodial skeleton
• Added
  • + manual digit 4 plus metapodial segment SubClassOf has skeleton some manual digit 4 digitopodial skeleton

Changes for: manual digit 3 plus metapodial segment

• Deleted
  • - manual digit 3 plus metapodial segment SubClassOf has skeleton some manual digit 3 digitopodial skeleton
• Added
  • + manual digit 3 plus metapodial segment SubClassOf has skeleton some manual digit 3 digitopodial skeleton

Changes for: manual digit 2 plus metapodial segment

• Deleted
  • - manual digit 2 plus metapodial segment SubClassOf has skeleton some manual digit 2 digitopodial skeleton
• Added
  • + manual digit 2 plus metapodial segment SubClassOf has skeleton some manual digit 2 digitopodial skeleton

Changes for: pedal digit 5 plus metapodial segment

• Deleted
  • - pedal digit 5 plus metapodial segment SubClassOf has skeleton some pedal digit 5 digitopodial skeleton
• Added
  • + pedal digit 5 plus metapodial segment SubClassOf has skeleton some pedal digit 5 digitopodial skeleton

Changes for: pedal digit 4 plus metapodial segment

• Deleted
  • - pedal digit 4 plus metapodial segment SubClassOf has skeleton some pedal digit 4 digitopodial skeleton
• Added
  • + pedal digit 4 plus metapodial segment SubClassOf has skeleton some pedal digit 4 digitopodial skeleton

Changes for: pedal digit 1 plus metapodial segment

• Deleted
  • - pedal digit 1 plus metapodial segment SubClassOf has skeleton some pedal digit 1 digitopodial skeleton
• Added
  • + pedal digit 1 plus metapodial segment SubClassOf has skeleton some pedal digit 1 digitopodial skeleton

Changes for: pedal digit 3 plus metapodial segment

• Deleted
  • - pedal digit 3 plus metapodial segment SubClassOf has skeleton some pedal digit 3 digitopodial skeleton
• Added
  • + pedal digit 3 plus metapodial segment SubClassOf has skeleton some pedal digit 3 digitopodial skeleton

Changes for: pedal digit 2 plus metapodial segment

• Deleted
  • - pedal digit 2 plus metapodial segment SubClassOf has skeleton some pedal digit 2 digitopodial skeleton
• Added
  • + pedal digit 2 plus metapodial segment SubClassOf has skeleton some pedal digit 2 digitopodial skeleton

Changes for: pedal digit plus metapodial segment

• Deleted
  • - pedal digit plus metapodial segment SubClassOf has skeleton some pedal digit digitopodial skeleton
• Added
  • + pedal digit plus metapodial segment SubClassOf has skeleton some pedal digit digitopodial skeleton

Changes for: manual digit 1 plus metapodial segment

• Deleted
  • - manual digit 1 plus metapodial segment SubClassOf has skeleton some manual digit 1 digitopodial skeleton
• Added
  • + manual digit 1 plus metapodial segment SubClassOf has skeleton some manual digit 1 digitopodial skeleton

Changes for: lumen of atrioventricular canal

• Deleted
  • - lumen of atrioventricular canal EquivalentTo anatomical space and enclosed by some atrioventricular canal
  • - lumen of atrioventricular canal SubClassOf enclosed by some atrioventricular canal
• Added
  • + lumen of atrioventricular canal EquivalentTo anatomical space and luminal space of some atrioventricular canal
  • + lumen of atrioventricular canal SubClassOf luminal space of some atrioventricular canal

Changes for: acinus of lacrimal gland

• Added
  • + acinus of lacrimal gland SubClassOf structure with developmental contribution from neural crest

Changes for: mesorchium

• Added
  • + mesorchium has related synonym testis mesentery { database cross reference=EMAPA:17971 }

Changes for: left pelvic girdle region

• Deleted
  • - left pelvic girdle region SubClassOf has skeleton some skeleton of left pelvic girdle
• Added
  • + left pelvic girdle region SubClassOf has skeleton some skeleton of left pelvic girdle

Changes for: right pelvic girdle region

• Deleted
  • - right pelvic girdle region SubClassOf has skeleton some skeleton of right pelvic girdle
• Added
  • + right pelvic girdle region SubClassOf has skeleton some skeleton of right pelvic girdle

Changes for: flexor hallucis brevis muscle

• Added
  • + flexor hallucis brevis muscle has related synonym flexor digit I brevis { database cross reference=EMAPA:36259 }

Changes for: flexor pollicis brevis muscle

• Deleted
  • - flexor pollicis brevis muscle SubClassOf has muscle antagonist some extensor pollicis longus muscle
• Added
  • + flexor pollicis brevis muscle SubClassOf has muscle antagonist some extensor pollicis longus muscle

Changes for: mammary gland

• Deleted
  • - mammary gland SubClassOf exocrine gland
  • - mammary gland SubClassOf gland of integumental system
• Added
  • + mammary gland SubClassOf exocrine gland of integumental system

Changes for: epithelium of crypt of Lieberkuhn

• Deleted
  • - epithelium of crypt of lieberkuhn label epithelium of crypt of lieberkuhn
• Added
  • + epithelium of crypt of Lieberkuhn label epithelium of crypt of Lieberkuhn

Changes for: habenula

• Deleted
  • - habenula database cross reference DHBA:HN
  • - habenula database cross reference HBA:Hb

Changes for: ventral lateral nucleus

• Added
  • + ventral lateral nucleus database cross reference HBA:DTLv

Changes for: Verson’s gland

• Deleted
  • - Verson’s gland SubClassOf exocrine gland
  • - Verson’s gland SubClassOf gland of integumental system
• Added
  • + Verson’s gland SubClassOf exocrine gland of integumental system

Changes for: adductor muscle of hip

• Added
  • + adductor muscle of hip EquivalentTo adductor muscle and part of some pelvic complex

Changes for: Ammon’s horn

• Added
  • + Ammon’s horn database cross reference DMBA:CA

Changes for: medial habenular nucleus

• Added
  • + medial habenular nucleus database cross reference HBA:Hm

Changes for: lamina propria of esophagus

• Added
  • + lamina propria of esophagus has related synonym esophageal lamina propria { database cross reference=EMAPA:26987 }

Changes for: iliopsoas

• Deleted
  • - iliopsoas SubClassOf has muscle antagonist some gluteus maximus
  • - iliopsoas SubClassOf has muscle antagonist some muscle of posterior compartment of thigh
• Added
  • + iliopsoas SubClassOf has muscle antagonist some gluteus maximus
  • + iliopsoas SubClassOf has muscle antagonist some muscle of posterior compartment of thigh

Changes for: reticular layer of dermis

• Added
  • + reticular layer of dermis has related synonym dermal reticular layer { database cross reference=EMAPA:35283 }

Changes for: papillary layer of dermis

• Added
  • + papillary layer of dermis has related synonym dermal papillary layer { database cross reference=EMAPA:35282 }

Changes for: crypt of Lieberkuhn of large intestine

• Deleted
  • - crypt of lieberkuhn of large intestine label crypt of lieberkuhn of large intestine
• Added
  • + crypt of Lieberkuhn of large intestine label crypt of Lieberkuhn of large intestine

Changes for: central nervous system cell part cluster

• Deleted
  • - central nervous system cell part cluster definition A multi cell component structure that is part of a central nervous system. { database cross reference=OBOL:automatic }
• Added
  • + central nervous system cell part cluster definition A multi cell part structure that is part of a central nervous system. { database cross reference=OBOL:automatic }

Changes for: root of vagus nerve

• Deleted
  • - root of vagus nerve EquivalentTo root of cranial nerve and part of some vagus nerve
  • - root of vagus nerve SubClassOf part of some vagus nerve
  • - root of vagus nerve SubClassOf structure with developmental contribution from neural crest
• Added
  • + root of vagus nerve EquivalentTo nerve root and continuous with some vagus nerve
  • + root of vagus nerve SubClassOf continuous with some vagus nerve

Changes for: lumen of hemipenial sheath

• Deleted
  • - lumen of hemipenial sheath EquivalentTo anatomical space and enclosed by some hemipenal sheath
  • - lumen of hemipenial sheath SubClassOf enclosed by some hemipenal sheath
• Added
  • + lumen of hemipenial sheath EquivalentTo anatomical space and luminal space of some hemipenal sheath
  • + lumen of hemipenial sheath SubClassOf luminal space of some hemipenal sheath

Changes for: gland of Zeis

• Deleted
  • - gland of Zeis definition Glands of Zeis are unilobar sebaceous glands located on the margin of the eyelid. The glands of Zeis service the eyelash. These glands produce an oily substance that is issued through the excretory ducts of the sebaceous lobule into the middle portion of the hair follicle.. { database cross reference=http://en.wikipedia.org/wiki/Gland_of_Zeis }
• Added
  • + gland of Zeis definition Glands of Zeis are unilobar sebaceous glands located on the margin of the eyelid. The glands of Zeis service the eyelash. These glands produce an oily substance that is issued through the excretory ducts of the sebaceous lobule into the middle portion of the hair follicle. { database cross reference=http://en.wikipedia.org/wiki/Gland_of_Zeis }
  • + gland of Zeis has exact synonym Zeis gland

Changes for: lacrimal gland

• Deleted
  • - lacrimal gland EquivalentTo gland and part of some lacrimal apparatus and in lateral side of some ocular region
  • - lacrimal gland SubClassOf exocrine gland
  • - lacrimal gland SubClassOf gland of integumental system
  • - lacrimal gland SubClassOf in lateral side of some ocular region
  • - lacrimal gland definition The lacrimal glands are paired almond-shaped glands, one for each eye, that secrete the aqueous layer of the tear film. They are situated in the upper, outer portion of each orbit. Inflammation of the lacrimal glands is called dacryoadenitis[WP]. { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_gland }
• Added
  • + lacrimal gland EquivalentTo gland and part of some lacrimal apparatus
  • + lacrimal gland SubClassOf develops from some lacrimal gland bud
  • + lacrimal gland SubClassOf exocrine gland of integumental system
  • + lacrimal gland SubClassOf structure with developmental contribution from neural crest
  • + lacrimal gland definition The lacrimal glands are paired almond-shaped glands, located in or near the orbital region, that secrete the aqueous layer of the tear film.[WP]. { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_gland }
  • + lacrimal gland taxon notes In humans, they are situated in the upper, outer portion of each orbit
  • + lacrimal gland taxon notes Innervation is highly complex and species-specific

Changes for: tarsal gland

• Deleted
  • - tarsal gland definition A modified lobulated sebaceous gland at the rim of an eyelid, responsible for the supply of sebum. { database cross reference=http://en.wikipedia.org/wiki/Meibomian_gland , database cross reference=ISBN10:0123813611 }
  • - tarsal gland function notes provides barrier to prevent dessication of cornea[ISBN10:0123813611]
  • - tarsal gland has exact synonym Meibomian gland
  • - tarsal gland has related synonym palpebral gland
• Added
  • + tarsal gland definition A modified lobulated sebaceous gland at the rim of an eyelid, responsible for the supply of meibum. { database cross reference=http://en.wikipedia.org/wiki/Meibomian_gland , database cross reference=http://www.ncbi.nlm.nih.gov/pubmed/20664693 , database cross reference=ISBN10:0123813611 }
  • + tarsal gland development notes in mice, meibomian gland development is initiated around E18.5 with the formation of an epithelial placode and mesenchymal condensation, similar to that observed in hair follicle development; invagination of the epithelium into the developing mesenchyme then continues from birth to about P3 with initial branching of the epithelial cord detected at P5; by P8 the developing meibomian gland shows extensive ductal branching and the formation of distinct acini with mature meibomian glands present by P15 or eyelid opening[PMID:20664693]
  • + tarsal gland has exact synonym Meibomian gland { database cross reference=MA:0001249 }
  • + tarsal gland has related synonym palpebral gland { database cross reference=MA:0001249 }

Changes for: conjunctiva

• Added
  • + conjunctiva has exact synonym conjunctivae { database cross reference=XAO:0000182 , has synonym type=plural term }
  • + conjunctiva has exact synonym conjunctivas { database cross reference=XAO:0000182 , has synonym type=plural term }

Changes for: pedal acropodium region

• Deleted
  • - pedal acropodium region SubClassOf has skeleton some skeleton of pedal acropodium
• Added
  • + pedal acropodium region SubClassOf has skeleton some skeleton of pedal acropodium

Changes for: acropodium region

• Deleted
  • - acropodium region SubClassOf has skeleton some acropodial skeleton
• Added
  • + acropodium region SubClassOf has skeleton some acropodial skeleton

Changes for: manual acropodium region

• Deleted
  • - manual acropodium region SubClassOf has skeleton some skeleton of manual acropodium
• Added
  • + manual acropodium region SubClassOf has skeleton some skeleton of manual acropodium

Changes for: urachal lumen

• Deleted
  • - urachal lumen EquivalentTo anatomical space and enclosed by some urachus
  • - urachal lumen SubClassOf enclosed by some urachus
• Added
  • + urachal lumen EquivalentTo anatomical space and luminal space of some urachus
  • + urachal lumen SubClassOf luminal space of some urachus

Changes for: perianal skin

• Deleted
  • - perianal skin EquivalentTo zone of skin and part of some perineum
  • - perianal skin SubClassOf abdominal segment skin
  • - perianal skin SubClassOf part of some perineum
  • - perianal skin definition A zone of skin that is part of a perineum. { database cross reference=OBOL:automatic }
• Added
  • + perianal skin SubClassOf part of some skin of pelvis
  • + perianal skin SubClassOf skin of pelvis
  • + perianal skin definition A zone of skin that is part of the area surrounding the anus. { database cross reference=UBERON:cjm }

Changes for: metencephalon

• Added
  • + metencephalon has exact synonym epencephalon-2 { database cross reference=FMA:62003 }

Changes for: rhombomere

• Deleted
  • - rhombomere comment AO notes: DHBA divides this into A(1-3),B(4),C(5-7) and D(8)
• Added
  • + rhombomere external ontology notes DHBA divides this into A(1-3),B(4),C(5-7) and D(8)

Changes for: midbrain

• Deleted
  • - midbrain database cross reference BAMS:MB

Changes for: appendicular skeletal system

• Deleted
  • - appendicular skeletal system SubClassOf has skeleton some appendicular skeleton
• Added
  • + appendicular skeletal system SubClassOf has skeleton some appendicular skeleton

Changes for: island of Calleja

• Added
  • + island of Calleja database cross reference HBA:IslC

Changes for: medial septal nucleus

• Deleted
  • - medial septal nucleus external definition A nucleus in the septal area, coextensive with the diagonal band of Broca; it has afferent and cholinergic efferent connections with a variety of forebrain and brain stem areas including the hippocampus, the lateral hypothalamus, the tegmentum, and the amygdaloid bodies[BTO:0002446, Dorlands_Medical_Dictionary:MerckSource]. { source=BTO:0002446, Dorlands_Medical_Dictionary:MerckSource }
• Added
  • + medial septal nucleus external definition A nucleus in the septal area, coextensive with the diagonal band of Broca; it has afferent and cholinergic efferent connections with a variety of forebrain and brain stem areas including the hippocampus, the lateral hypothalamus, the tegmentum, and the amygdaloid bodies. { source=BTO:0002446 }

Changes for: fibrous membrane of synovial tendon sheath

• Added
  • + fibrous membrane of synovial tendon sheath EquivalentTo organ component layer and bounding layer of some tendon sheath and composed primarily of some fibrous connective tissue
  • + fibrous membrane of synovial tendon sheath SubClassOf composed primarily of some fibrous connective tissue

Changes for: sebum

• Deleted
  • - sebum function notes sebum produced by tarsal glands prevents evaporation of the eye’s tear film, prevents tear spillage onto the cheek, and makes the closed lids airtight[WP]

Changes for: lacrimal drainage system

• Deleted
  • - lacrimal duct SubClassOf duct
  • - lacrimal duct database cross reference http://en.wikipedia.org/wiki/Lacrimal_canaliculi
  • - lacrimal duct definition Organ with organ cavity which connects the vestibule of the conjunctival sac to the nasal cavity. Examples: There are only two lacrimal ducts, the right and the left lacrimal ducts.[FMA] { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_canaliculi , database cross reference=FMA:61063 }
  • - lacrimal duct editor note TODO - resolve canaliculus vs tear duct vs lacrimal vs nasolacrimal
  • - lacrimal duct has related synonym lacrimal caniculus { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_duct }
  • - lacrimal duct label lacrimal duct
• Added
  • + lacrimal drainage system SubClassOf channel for some secretion of lacrimal gland
  • + lacrimal drainage system SubClassOf connects some lacrimal punctum
  • + lacrimal drainage system SubClassOf connects some nasal cavity
  • + lacrimal drainage system SubClassOf organ
  • + lacrimal drainage system database cross reference http://www.snomedbrowser.com/Codes/Details/280426002
  • + lacrimal drainage system definition A collection of channels that connects the conjunctival sac with the nasal cavity, encompassing the lacrimal ducts, the lacrimal sac and the naso-lacrimal duct. { database cross reference=UBERON:cjm }
  • + lacrimal drainage system editor note TODO - resolve lacrimal canaliculus vs larcimal duct
  • + lacrimal drainage system label lacrimal drainage system
  • + lacrimal drainage system taxon notes chelonians lack a lacrimal duct, and lacrimal/harderian secretions remain in or spill from the conjunctival sac[PMID:7559104]

Changes for: semicircular canal

• Added
  • + semicircular canal has related synonym semicircular ducts { database cross reference=XAO:0000198 , has synonym type=plural term }

Changes for: femoral gland

• Deleted
  • - femoral gland SubClassOf exocrine gland
  • - femoral gland SubClassOf gland of integumental system
• Added
  • + femoral gland SubClassOf exocrine gland of integumental system

Changes for: nasal cartilage

• Deleted
  • - nasal cartilage SubClassOf encloses some nasal vestibule
• Added
  • + nasal cartilage SubClassOf contains some nasal vestibule

Changes for: sebaceous gland

• Added
  • + sebaceous gland SubClassOf exocrine gland of integumental system

Changes for: sweat gland

• Deleted
  • - sweat gland SubClassOf exocrine gland
• Added
  • + sweat gland SubClassOf exocrine gland of integumental system

Changes for: secretion of lacrimal gland

• Deleted
  • - lacrimal gland secretion definition A substance secreted the lacrimal gland.[Automatically generated definition] { database cross reference=http://en.wikipedia.org/wiki/Tear , database cross reference=OBOL:automatical }
  • - lacrimal gland secretion label lacrimal gland secretion
• Added
  • + secretion of lacrimal gland definition Aqueous substance secreted by the lacrimal gland. { database cross reference=http://en.wikipedia.org/wiki/Tear , database cross reference=UBERON:cjm }
  • + secretion of lacrimal gland has exact synonym lacrimal fluid
  • + secretion of lacrimal gland has exact synonym lacrimal gland secretion
  • + secretion of lacrimal gland label secretion of lacrimal gland

Changes for: mucosa of larynx

• Added
  • + mucosa of larynx has related synonym laryngeal mucous membrane { database cross reference=EMAPA:18334 }

Changes for: outer nuclear layer of retina

• Added
  • + outer nuclear layer of retina has exact synonym neural retina outer nuclear layer { database cross reference=EMAPA:19157 }
  • + outer nuclear layer of retina has related synonym external nuclear layer { database cross reference=BTO:0005600 }
  • + outer nuclear layer of retina has related synonym layer of outer granules { database cross reference=BTO:0005600 }

Changes for: pigmented layer of retina

• Added
  • + pigmented layer of retina database cross reference EMAPA:35738
  • + pigmented layer of retina database cross reference MA:0003173

Changes for: inner plexiform layer of retina

• Deleted
  • - inner plexiform layer of retina comment BTO misspelling?
  • - inner plexiform layer of retina definition Cytoarchitectural layer of the retina that is made up of a dense reticulum of fibrils formed by interlaced dendrites of retinal ganglion cells and cells of the inner nuclear layer (adapted from Wikipedia) { database cross reference=NIF_GrossAnatomy:nlx_anat_1005032 }
  • - inner plexiform layer of retina has narrow synonym IPL
• Added
  • + inner plexiform layer of retina database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_20558
  • + inner plexiform layer of retina definition Cytoarchitectural layer of the retina that is made up of a dense reticulum of fibrils formed by interlaced dendrites of retinal ganglion cells and cells of the inner nuclear layer (adapted from Wikipedia) { database cross reference=NIF_GrossAnatomy:nlx_20558 }
  • + inner plexiform layer of retina external ontology notes http://neurolex.org/wiki/Nlx_anat_1005032 appears to be retired
  • + inner plexiform layer of retina has narrow synonym IPL { has synonym type=abbreviation }

Changes for: ganglionic layer of retina

• Deleted
  • - ganglionic layer of retina definition Cytoarchitectural layer of retina that contains somata of retinal ganglion cells { database cross reference=NIF_GrossAnatomy:nlx_anat_1005030 }
  • - ganglionic layer of retina editor note check exact synonyms in ZFA / XAO
  • - ganglionic layer of retina has exact synonym ganglion cell layer { database cross reference=FMA:58687 , database cross reference=ZFA:0000024 }
• Added
  • + ganglionic layer of retina database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_36500
  • + ganglionic layer of retina definition Cytoarchitectural layer of retina that contains somata of retinal ganglion cells, bounded by the stratum opticum and the inner plexiform layer { database cross reference=NIF_GrossAnatomy:nlx_36500 }
  • + ganglionic layer of retina external ontology notes NIFSTD class appears to be retired in nlx[http://neurolex.org/wiki/Nlx_anat_1005030] { external ontology=NIF }
  • + ganglionic layer of retina has broad synonym ganglion cell layer { database cross reference=FMA:58687 , database cross reference=ZFA:0000024 }

Changes for: nerve fiber layer of retina

• Added
  • + nerve fiber layer of retina has related synonym neural retina nerve fibre layer { database cross reference=EMAPA:18591 }

Changes for: outer plexiform layer of retina

• Deleted
  • - outer plexiform layer of retina has narrow synonym OPL
• Added
  • + outer plexiform layer of retina abbreviation OPL { has synonym type=NARROW }

Changes for: inner nuclear layer of retina

• Deleted
  • - inner nuclear layer of retina definition Cytoarchitectural layer of retina containing closely packed cell bodies, the majority of which are bipolar cells (adapted from Wikipedia). { database cross reference=NIF_GrossAnatomy:nlx_anat_1005031 }
  • - inner nuclear layer of retina editor note This class was created automatically from a combination of ontologies
  • - inner nuclear layer of retina has related synonym layer of inner granules { database cross reference=NIF_GrossAnatomy:nlx_anat_1005031 }
• Added
  • + inner nuclear layer of retina comment AO notes http://uri.neuinfo.org/nif/nifstd/nlx_anat_1005031 appears to be retired
  • + inner nuclear layer of retina database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_93816
  • + inner nuclear layer of retina definition Cytoarchitectural layer of retina containing closely packed cell bodies, the majority of which are bipolar cells (adapted from Wikipedia). { database cross reference=NIF_GrossAnatomy:nlx_93816 }
  • + inner nuclear layer of retina has exact synonym neural retina inner nuclear layer { database cross reference=EMAPA:19155 }
  • + inner nuclear layer of retina has related synonym layer of inner granules { database cross reference=NIF_GrossAnatomy:nlx_93816 }

Changes for: oviduct mucosal fold

• Added
  • + oviduct mucosal fold database cross reference FMA:18537

Changes for: ceratobranchials II–IV

• Deleted
  • - ceratobranchials II–IV SubClassOf anatomical cluster
  • - ceratobranchials II–IV SubClassOf endoderm-derived structure
  • - ceratobranchials II–IV SubClassOf structure with developmental contribution from neural crest
• Added
  • + ceratobranchials II–IV SubClassOf ceratobranchial series

Changes for: cloacal epithelium

• Added
  • + cloacal epithelium has related synonym cloacal endoderm { database cross reference=EMAPA:27577 }

Changes for: infra-orbital nerve

• Deleted
  • - infra-orbital nerve SubClassOf nerve
• Added
  • + infra-orbital nerve SubClassOf lower eyelid nerve

Changes for: posterior superior alveolar nerve

• Added
  • + posterior superior alveolar nerve database cross reference FMA:52931

Changes for: cloacal lumen

• Deleted
  • - cloacal lumen EquivalentTo anatomical space and enclosed by some cloaca
  • - cloacal lumen SubClassOf enclosed by some cloaca
• Added
  • + cloacal lumen EquivalentTo anatomical space and luminal space of some cloaca
  • + cloacal lumen SubClassOf luminal space of some cloaca

Changes for: lumen of terminal part of digestive tract

• Deleted
  • - lumen of terminal part of digestive tract EquivalentTo anatomical space and enclosed by some terminal part of digestive tract
  • - lumen of terminal part of digestive tract SubClassOf enclosed by some terminal part of digestive tract
• Added
  • + lumen of terminal part of digestive tract EquivalentTo anatomical space and luminal space of some terminal part of digestive tract
  • + lumen of terminal part of digestive tract SubClassOf luminal space of some terminal part of digestive tract

Changes for: lacrimal apparatus

• Deleted
  • - lacrimal apparatus definition The lacrimal apparatus is the physiologic system containing the orbital structures for tear production and drainage. It consists of: (a) the lacrimal gland, which secretes the tears, and its excretory ducts, which convey the fluid to the surface of the eye; (b) the lacrimal canaliculi, the lacrimal sac, and the nasolacrimal duct, by which the fluid is conveyed into the cavity of the nose. [WP,unvetted]. { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_apparatus }
  • - lacrimal apparatus has related synonym apparatus lacrimalis { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_apparatus , has synonym type=latin term }
• Added
  • + lacrimal apparatus definition A network of orbital structures of the eye that secrete and drain tears from the surface of the eyeball into the nasal cavity; these parts include the lacrimal glands, lacrimal lake, lacrimal ducts, lacrimal canals, lacrimal sacs, nasolacrimal ducts, and lacrimal puncta. { database cross reference=MGI:anna }
  • + lacrimal apparatus has exact synonym apparatus lacrimalis { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_apparatus , has synonym type=latin term }
  • + lacrimal apparatus has exact synonym lacrymal system { database cross reference=MGI:anna }
  • + lacrimal apparatus has related synonym lacrimal drainage system { database cross reference=https://orcid.org/0000-0002-6601-2165 }

Changes for: lacrimal canaliculus

• Deleted
  • - lacrimal canaliculus editor note TODO - resolve canaliculus vs tear duct vs lacrimal vs nasolacrimal
• Added
  • + lacrimal canaliculus SubClassOf connects some lacrimal punctum
  • + lacrimal canaliculus SubClassOf connects some lacrimal sac
  • + lacrimal canaliculus editor note TODO - resolve lacrimal canaliculus vs larcimal duct

Changes for: mammary duct

• Deleted
  • - mammary duct has exact synonym mammary gland duct
• Added
  • + mammary duct has exact synonym mammary gland duct { database cross reference=MA:0000791 }

Changes for: eyelid

• Deleted
  • - eyelid has relational adjective blepharo
• Added
  • + eyelid has relational adjective blepharic

Changes for: lower jaw region

• Deleted
  • - lower jaw region SubClassOf has skeleton some skeleton of lower jaw
• Added
  • + lower jaw region SubClassOf has skeleton some skeleton of lower jaw

Changes for: oculomotor nuclear complex

• Added
  • + oculomotor nuclear complex has exact synonym OM { database cross reference=XAO:0004389 , has synonym type=abbreviation }

Changes for: spinal nucleus of trigeminal nerve

• Added
  • + spinal nucleus of trigeminal nerve has related synonym trigeminal spinal sensory nucleus { database cross reference=EMAPA:35885 }

Changes for: upper jaw region

• Deleted
  • - upper jaw region SubClassOf has skeleton some skeleton of upper jaw
• Added
  • + upper jaw region SubClassOf has skeleton some skeleton of upper jaw

Changes for: pudendal nerve

• Added
  • + pudendal nerve SubClassOf innervates some anal sphincter
  • + pudendal nerve SubClassOf innervates some external genitalia
  • + pudendal nerve SubClassOf innervates some external urethral sphincter

Changes for: neurocranium

• Deleted
  • - neurocranium SubClassOf encloses some brain
• Added
  • + neurocranium SubClassOf contains some brain

Changes for: cavity of pharynx

• Deleted
  • - cavity of pharynx EquivalentTo anatomical space and enclosed by some pharynx
  • - cavity of pharynx SubClassOf enclosed by some pharynx
• Added
  • + cavity of pharynx EquivalentTo anatomical space and luminal space of some pharynx
  • + cavity of pharynx SubClassOf luminal space of some pharynx

Changes for: tibialis posterior

• Deleted
  • - tibialis posterior SubClassOf has muscle antagonist some tibialis anterior
• Added
  • + tibialis posterior SubClassOf has muscle antagonist some tibialis anterior

Changes for: orbit of skull

• Deleted
  • - orbit of skull SubClassOf encloses some camera-type eye
• Added
  • + orbit of skull SubClassOf contains some camera-type eye

Changes for: epithelium of gonad

• Added
  • + epithelium of gonad has related synonym gonadal sheath { database cross reference=FBbt:00004859 }

Changes for: lumen of intestine

• Deleted
  • - lumen of intestine EquivalentTo anatomical space and enclosed by some intestine
  • - lumen of intestine SubClassOf enclosed by some intestine
• Added
  • + lumen of intestine EquivalentTo anatomical space and luminal space of some intestine
  • + lumen of intestine SubClassOf luminal space of some intestine

Changes for: anterior nucleus of hypothalamus

• Added
  • + anterior nucleus of hypothalamus database cross reference FMA:77607

Changes for: oculomotor nerve root

• Deleted
  • - oculomotor nerve fibers editor note TODO - make subclass of root of cranial nerve
  • - oculomotor nerve fibers label oculomotor nerve fibers
• Added
  • + oculomotor nerve root EquivalentTo root of cranial nerve and continuous with some oculomotor nerve
  • + oculomotor nerve root SubClassOf continuous with some oculomotor nerve
  • + oculomotor nerve root database cross reference http://uri.neuinfo.org/nif/nifstd/birnlex_1335
  • + oculomotor nerve root definition Initial segment of the occulomotor nerve as it leaves the midbrain. { database cross reference=NIF_GrossAnatomy:birnlex_1335 }
  • + oculomotor nerve root external ontology notes todo - determine pattern for central part of nerve vs fibers vs root
  • + oculomotor nerve root label oculomotor nerve root

Changes for: superior medullary velum

• Deleted
  • - superior medullary velum SubClassOf white matter of hindbrain
• Added
  • + superior medullary velum SubClassOf white matter of metencephalon

Changes for: posterior parahippocampal gyrus

• Added
  • + posterior parahippocampal gyrus has related synonym parahippocampal gyrus, posterior division { database cross reference=http://orcid.org/0000-0001-6755-0259 }

Changes for: accessory olfactory bulb granule cell layer

• Added
  • + accessory olfactory bulb granule cell layer database cross reference DMBA:AGr
  • + accessory olfactory bulb granule cell layer has exact synonym AOB, granular layer { database cross reference=DMBA:AGr }

Changes for: lower part of vagina

• Added
  • + lower part of vagina has related synonym sinus vagina { database cross reference=EMAPA:18999 }
  • + lower part of vagina has related synonym vaginal bulb { database cross reference=EMAPA:18999 }

Changes for: facial muscle

• Added
  • + facial muscle has related synonym cranial-facial muscle { database cross reference=EMAPA:25133 }
  • + facial muscle has related synonym cranio-facial muscle { database cross reference=EMAPA:25133 }
  • + facial muscle has related synonym craniofacial muscle { database cross reference=EMAPA:25133 }

Changes for: os basale

• Deleted
  • - os basale SubClassOf anatomical cluster
• Added
  • + os basale SubClassOf bone element

Changes for: temporalis muscle

• Deleted
  • - temporalis muscle SubClassOf has muscle antagonist some platysma
• Added
  • + temporalis muscle SubClassOf has muscle antagonist some platysma

Changes for: extrastriate cortex

• Added
  • + extrastriate cortex has related synonym extrastriate cortical area { database cross reference=BTO:0004704 }

Changes for: non-connected functional system

• Deleted
  • - non-connected functional system definition An anatomical group whose component structures share a common function. { database cross reference=AEO:0000093 , database cross reference=AEO:JB }
• Added
  • + non-connected functional system definition An anatomical group whose component structures share a common function. { database cross reference=AEO:0000093 , database cross reference=AEO:JB , database cross reference=FBC:DOS , database cross reference=FBbt:00007278 }

Changes for: sinusoidal space

• Deleted
  • - sinusoidal space EquivalentTo anatomical space and enclosed by some sinusoid
  • - sinusoidal space SubClassOf enclosed by some sinusoid
• Added
  • + sinusoidal space EquivalentTo anatomical space and luminal space of some sinusoid
  • + sinusoidal space SubClassOf luminal space of some sinusoid

Changes for: prostate bud

• Deleted
  • - prostate bud SubClassOf embryonic tissue
  • - prostate bud SubClassOf meso-epithelium
  • - prostate bud SubClassOf part of some embryo
• Added
  • + prostate bud EquivalentTo epithelial bud and has potential to develop into some prostate gland
  • + prostate bud SubClassOf developing epithelial placode
  • + prostate bud SubClassOf has potential to develop into some prostate gland
  • + prostate bud SubClassOf part of some urogenital sinus epithelium
  • + prostate bud SubClassOf urogenital sinus epithelium
  • + prostate bud has related synonym prostate gland bud { database cross reference=EMAPA:36141 }
  • + prostate bud has related synonym prostate primordium

Changes for: hindlimb zeugopod

• Deleted
  • - hindlimb zeugopod SubClassOf has skeleton some hindlimb zeugopod skeleton
• Added
  • + hindlimb zeugopod SubClassOf has skeleton some hindlimb zeugopod skeleton

Changes for: forelimb stylopod

• Deleted
  • - forelimb stylopod SubClassOf has skeleton some humerus endochondral element
• Added
  • + forelimb stylopod SubClassOf has skeleton some humerus endochondral element

Changes for: vestibular nerve

• Added
  • + vestibular nerve has related synonym vestibulocochlear nerve cochlear component { database cross reference=EMAPA:17803 }

Changes for: lingual nerve

• Added
  • + lingual nerve database cross reference EMAPA:19168
  • + lingual nerve database cross reference MA:0001102
  • + lingual nerve has exact synonym lingual branch of trigeminal nerve
  • + lingual nerve has exact synonym trigeminal V nerve lingual branch { database cross reference=MA:0001102 }
  • + lingual nerve has exact synonym trigeminal nerve lingual branch

Changes for: basal nucleus of telencephalon

• Deleted
  • - basal nucleus of telencephalon definition Subdivision of telencephalon which is actually several islands of neurons lying within the substantia innominata, located ventral to the basal ganglia and anterior to the hypothalamus. { database cross reference=http://en.wikipedia.org/wiki/Nucleus_basalis_of_Meynert , database cross reference=FMA:61887 }
• Added
  • + basal nucleus of telencephalon database cross reference BTO:0001480
  • + basal nucleus of telencephalon database cross reference MESH:A08.186.211.730.885.105.880.100
  • + basal nucleus of telencephalon database cross reference http://en.wikipedia.org/wiki/Basal_optic_nucleus_of_Meynert
  • + basal nucleus of telencephalon definition A group of neurons in the basal forebrain that has wide projections to the neocortex and is rich in acetylcholine and choline acetyltransferase. It undergoes degeneration in paralysis agitans and Alzheimer’s disease. { database cross reference=BTO:0001480 }

Changes for: sphincter pupillae

• Deleted
  • - sphincter pupillae SubClassOf has muscle antagonist some dilatator pupillae
• Added
  • + sphincter pupillae SubClassOf has muscle antagonist some dilatator pupillae

Changes for: dilatator pupillae

• Deleted
  • - dilatator pupillae SubClassOf has muscle antagonist some sphincter pupillae
• Added
  • + dilatator pupillae SubClassOf has muscle antagonist some sphincter pupillae

Changes for: auricular artery

• Added
  • + auricular artery SubClassOf auricular blood vessel

Changes for: cortical arch of kidney

• Added
  • + cortical arch of kidney has exact synonym renal cortex proper { database cross reference=FMA:17876 }
  • + cortical arch of kidney has exact synonym renal cortical arch { database cross reference=FMA:17876 }

Changes for: acoustico-facial VII-VIII ganglion complex

• Added
  • + acoustico-facial VII-VIII ganglion complex has related synonym facio-acoustic ganglion complex { database cross reference=EMAPA:16794 }

Changes for: ampullary gland

• Deleted
  • - ampullary gland definition fusiform enlargement of the deferent duct, as it passes across the bladder wall, due to proliferation of glandular tissue in the regionally folded mucosa. { database cross reference=http://medical-dictionary.thefreedictionary.com/ampullary+gland }
• Added
  • + ampullary gland definition A paired accessory, glandular, androgen-dependent outpouchings of the proximal ductus deferens, one on each side, that produce and secrete lipids and glycogen, components of the seminal fluid; they open into the ampullae at the level of the colliculus seminalis, are lined by simple columnar epithelium with large, oval nuclei, and may be distinguished from those of the prostate as they are surrounded by a characteristic, dense, fibromuscular stroma { database cross reference=MP:0013323 }
  • + ampullary gland taxon notes there is no known human counterpart to the ampullary glands of the mouse[MP]

Changes for: alveolar wall

• Added
  • + alveolar wall has related synonym alveolus wall { database cross reference=EMAPA:35120 }

Changes for: trochlear nerve

• Deleted
  • - trochlear nerve editor note This class was created automatically from a combination of ontologies
• Added
  • + trochlear nerve development notes The human trochlear nerve is derived from the basal plate of the embryonic midbrain.
  • + trochlear nerve taxon notes Homologous trochlear nerves are found in all jawed vertebrates

Changes for: abducens nerve

• Deleted
  • - abducens nerve database cross reference BAMS:6n
• Added
  • + abducens nerve has related synonym abducents VI nerve { database cross reference=EMAPA:18216 }

Changes for: network of trabecular spaces in bone tissue

• Deleted
  • - network of trabecular spaces in bone tissue EquivalentTo anatomical space and enclosed by some trabecular network of bone
  • - network of trabecular spaces in bone tissue SubClassOf enclosed by some trabecular network of bone
• Added
  • + network of trabecular spaces in bone tissue EquivalentTo anatomical space and luminal space of some trabecular network of bone
  • + network of trabecular spaces in bone tissue SubClassOf luminal space of some trabecular network of bone

Changes for: cardiovascular system endothelium

• Added
  • + cardiovascular system endothelium has related synonym vascular endothelia { database cross reference=XAO:0000356 , has synonym type=plural term }

Changes for: mammillary peduncle

• Deleted
  • - mammillary peduncle SubClassOf diencephalic white matter
  • - mammillary peduncle SubClassOf peduncle of neuraxis
• Added
  • + mammillary peduncle SubClassOf peduncle of diencephalon

Changes for: paraaortic lymph node

• Added
  • + paraaortic lymph node has exact synonym lateral aortic lymph node { database cross reference=FMA:16604 }
  • + paraaortic lymph node has exact synonym lateral aortic node { database cross reference=FMA:16604 }

Changes for: vestibulocochlear nerve root

• Deleted
  • - vestibulocochlear nerve root SubClassOf ectoderm-derived structure
  • - vestibulocochlear nerve root SubClassOf organ part
• Added
  • + vestibulocochlear nerve root EquivalentTo nerve root and continuous with some vestibulocochlear nerve
  • + vestibulocochlear nerve root SubClassOf central nervous system cell part cluster
  • + vestibulocochlear nerve root SubClassOf continuous with some vestibulocochlear nerve
  • + vestibulocochlear nerve root SubClassOf root of cranial nerve

Changes for: medial dorsal nucleus of thalamus

• Deleted
  • - medial dorsal nucleus of thalamus database cross reference DMBA:MD
• Added
  • + medial dorsal nucleus of thalamus comment Editor node: consider generic medial nuclear group and adding medioventral as sibling of this
  • + medial dorsal nucleus of thalamus database cross reference HBA:MD

Changes for: intralaminar nuclear group

• Added
  • + intralaminar nuclear group database cross reference DHBA:ILN
  • + intralaminar nuclear group has exact synonym intralaminar nuclear complex { database cross reference=DHBA:ILN }

Changes for: lateral nuclear group of thalamus

• Added
  • + lateral nuclear group of thalamus database cross reference HBA:DTL
  • + lateral nuclear group of thalamus has exact synonym lateral group of nuclei { database cross reference=HBA:DTL }
  • + lateral nuclear group of thalamus has exact synonym lateral nuclear group of dorsal thalamus

Changes for: lamina of septum pellucidum

• Deleted
  • - lamina of septum pellucidum SubClassOf lamina of cerebral hemisphere
• Added
  • + lamina of septum pellucidum SubClassOf central nervous system cell part cluster
  • + lamina of septum pellucidum SubClassOf has part some gray matter
  • + lamina of septum pellucidum SubClassOf has part some white matter
  • + lamina of septum pellucidum SubClassOf nervous system cell part layer
  • + lamina of septum pellucidum SubClassOf structure with developmental contribution from neural crest
  • + lamina of septum pellucidum external ontology notes FMA classifies as white matter { external ontology=FMA }

Changes for: endometrium epithelium

• Deleted
  • - endometrium epithelium definition An epithelium that is part of a endometrium [Automatically generated definition]. { database cross reference=OBOL:automatic }
• Added
  • + endometrium epithelium SubClassOf epithelium of mucosa
  • + endometrium epithelium definition An epithelium that is part of an endometrium [Automatically generated definition]. { database cross reference=OBOL:automatic }

Changes for: rectal lumen

• Deleted
  • - rectal lumen EquivalentTo anatomical space and enclosed by some rectum
  • - rectal lumen SubClassOf enclosed by some rectum
• Added
  • + rectal lumen EquivalentTo anatomical space and luminal space of some rectum
  • + rectal lumen SubClassOf luminal space of some rectum

Changes for: kidney epithelium

• Added
  • + kidney epithelium has related synonym renal epithelium { database cross reference=EMAPA:35457 }

Changes for: lacrimal gland epithelium

• Added
  • + lacrimal gland epithelium SubClassOf structure with developmental contribution from neural crest

Changes for: pulmonary alveolus epithelium

• Added
  • + pulmonary alveolus epithelium has related synonym alveolar epithelium { database cross reference=EMAPA:35121 }

Changes for: embryonic cloacal lumen

• Deleted
  • - embryonic cloacal lumen EquivalentTo anatomical space and enclosed by some embryonic cloaca
  • - embryonic cloacal lumen SubClassOf enclosed by some embryonic cloaca
• Added
  • + embryonic cloacal lumen EquivalentTo anatomical space and luminal space of some embryonic cloaca
  • + embryonic cloacal lumen SubClassOf luminal space of some embryonic cloaca

Changes for: lumen of nutrient foramen

• Deleted
  • - lumen of nutrient foramen EquivalentTo anatomical space and enclosed by some nutrient foramen conduit
  • - lumen of nutrient foramen SubClassOf enclosed by some nutrient foramen conduit
• Added
  • + lumen of nutrient foramen EquivalentTo anatomical space and luminal space of some nutrient foramen conduit
  • + lumen of nutrient foramen SubClassOf luminal space of some nutrient foramen conduit

Changes for: pedal digitopodium region

• Deleted
  • - pedal digitopodium region SubClassOf has skeleton some skeleton of pedal digitopodium
• Added
  • + pedal digitopodium region SubClassOf has skeleton some skeleton of pedal digitopodium

Changes for: manual digitopodium region

• Deleted
  • - manual digitopodium region SubClassOf has skeleton some skeleton of manual digitopodium
• Added
  • + manual digitopodium region SubClassOf has skeleton some skeleton of manual digitopodium

Changes for: digitopodium region

• Deleted
  • - digitopodium region SubClassOf has skeleton some skeleton of digitopodium
• Added
  • + digitopodium region SubClassOf has skeleton some skeleton of digitopodium

Changes for: prehallux

• Deleted
  • - prehallux SubClassOf has skeleton some prehallux skeleton
• Added
  • + prehallux SubClassOf has skeleton some prehallux skeleton

Changes for: oviduct epithelium

• Added
  • + oviduct epithelium has related synonym columnar epithelium of the Fallopian tube { database cross reference=BTO:0002402 }
  • + oviduct epithelium has related synonym columnar epithelium of the oviduct { database cross reference=BTO:0002402 }
  • + oviduct epithelium has related synonym fallopian tube epithelium { database cross reference=BTO:0002402 }

Changes for: renal venous blood vessel

• Added
  • + renal venous blood vessel has related synonym kidney venous system { database cross reference=EMAPA:31450 }

Changes for: amiculum of dentate nucleus

• Deleted
  • - amiculum of dentate nucleus SubClassOf white matter of hindbrain
• Added
  • + amiculum of dentate nucleus SubClassOf white matter of metencephalon

Changes for: superior precentral sulcus

• Added
  • + superior precentral sulcus editor note todo - compare with precentral sulcus

Changes for: neuraxis cavity

• Deleted
  • - neuraxis cavity EquivalentTo organ cavity and enclosed by some central nervous system
  • - neuraxis cavity SubClassOf enclosed by some central nervous system
• Added
  • + neuraxis cavity EquivalentTo organ cavity and luminal space of some central nervous system
  • + neuraxis cavity SubClassOf luminal space of some central nervous system

Changes for: cranial placode

• Added
  • + cranial placode has related synonym cranial placodes { database cross reference=XAO:0000305 , has synonym type=plural term }

Changes for: paired fin

• Deleted
  • - paired fin SubClassOf has skeleton some paired fin skeleton
• Added
  • + paired fin SubClassOf has skeleton some paired fin skeleton

Changes for: submandibular lymph node

• Added
  • + submandibular lymph node has exact synonym level ib neck node { database cross reference=FMA:61224 }

Changes for: corpus luteum

• Added
  • + corpus luteum has exact synonym ovarian corpus luteum

Changes for: distal tarsal bone 1

• Added
  • + distal tarsal bone 1 has related synonym 1st cuneiform { database cross reference=EMAPA:36176 }

Changes for: distal tarsal bone 3

• Added
  • + distal tarsal bone 3 has related synonym 3rd cuneiform { database cross reference=EMAPA:36178 }

Changes for: distal tarsal bone 2

• Added
  • + distal tarsal bone 2 has related synonym 2nd cuneiform { database cross reference=EMAPA:36177 }

Changes for: cuboid bone

• Deleted
  • - cuboid bone definition A tarsal bone that is formed from distal tarsals 4 and 5. In the human body, the cuboid bone is one of the seven tarsal bones of the pes. [WP,modified]. { database cross reference=http://en.wikipedia.org/wiki/Cuboid_bone }
• Added
  • + cuboid bone definition A tarsal bone that is formed from distal tarsals 4 and 5. [WP,modified]. { database cross reference=http://en.wikipedia.org/wiki/Cuboid_bone }

Changes for: precentral fissure of cerebellum

• Added
  • + precentral fissure of cerebellum editor note compare with precentral sulcus

Changes for: rib skeletal system

• Deleted
  • - rib skeletal system SubClassOf has skeleton some thoracic rib cage
• Added
  • + rib skeletal system SubClassOf has skeleton some thoracic rib cage

Changes for: carpal bone

• Added
  • + carpal bone has related synonym carpus bone { database cross reference=EMAPA:25056 }

Changes for: pectoral girdle region

• Deleted
  • - pectoral girdle region SubClassOf has skeleton some pectoral girdle skeleton
• Added
  • + pectoral girdle region SubClassOf has skeleton some pectoral girdle skeleton

Changes for: cardiac ganglion

• Added
  • + cardiac ganglion has exact synonym cardiac ganglia set { database cross reference=FMA:77582 }

Changes for: ascending aorta

• Added
  • + ascending aorta has exact synonym ascending thoracic aorta { database cross reference=EMAPA:17014 }

Changes for: placental cotyledon

• Added
  • + placental cotyledon has exact synonym placenta cotyledon

Changes for: deltoid

• Deleted
  • - deltoid SubClassOf has muscle antagonist some latissimus dorsi muscle
• Added
  • + deltoid SubClassOf has muscle antagonist some latissimus dorsi muscle

Changes for: infraspinatus muscle

• Deleted
  • - infraspinatus muscle has exact synonym infraspinatus
• Added
  • + infraspinatus muscle has exact synonym infraspinatus { database cross reference=MA:0002323 }
  • + infraspinatus muscle has related synonym infrascapularis { database cross reference=EMAPA:18526 }

Changes for: paracentral sulcus

• Deleted
  • - paracentral sulcus database cross reference BAMS:pcs
  • - paracentral sulcus database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Precentral_Sulcus
  • - paracentral sulcus has related synonym precentral sulcus { database cross reference=BAMS:pcs }

Changes for: principal sensory nucleus of trigeminal nerve

• Added
  • + principal sensory nucleus of trigeminal nerve database cross reference HBA:Pr5

Changes for: ventral posterior nucleus of thalamus

• Deleted
  • - ventral posterior nucleus of thalamus has related synonym ventral posterior complex of the thalamus { database cross reference=BAMS:VP }
• Added
  • + ventral posterior nucleus of thalamus database cross reference ABA:VP
  • + ventral posterior nucleus of thalamus has related synonym ventral posterior complex of the thalamus { database cross reference=ABA:VP , database cross reference=BAMS:VP }

Changes for: pedal digit 5

• Added
  • + pedal digit 5 has exact synonym digitus minimus; digitus quintus [v] { database cross reference=FMA:25053 }

Changes for: perianal sebaceous gland

• Deleted
  • - perianal sebaceous gland EquivalentTo sebaceous gland and part of some anal region and part of some pilosebaceous unit
  • - perianal sebaceous gland SubClassOf part of some anal region
• Added
  • + perianal sebaceous gland EquivalentTo sebaceous gland and part of some pilosebaceous unit and part of some perianal skin
  • + perianal sebaceous gland SubClassOf part of some perianal skin
  • + perianal sebaceous gland SubClassOf pelvic region element

Changes for: endometrium glandular epithelium

• Added
  • + endometrium glandular epithelium EquivalentTo glandular epithelium and part of some endometrium epithelium
  • + endometrium glandular epithelium SubClassOf ciliated columnar oviduct epithelium
  • + endometrium glandular epithelium database cross reference FMA:86488
  • + endometrium glandular epithelium has exact synonym glandular part of endometrium { database cross reference=FMA:86488 }
  • + endometrium glandular epithelium has exact synonym uterine glands
  • + endometrium glandular epithelium has exact synonym uterine glands set

Changes for: visceral yolk sac cavity

• Deleted
  • - visceral yolk sac cavity EquivalentTo anatomical space and enclosed by some visceral yolk sac
  • - visceral yolk sac cavity SubClassOf enclosed by some visceral yolk sac
• Added
  • + visceral yolk sac cavity EquivalentTo anatomical space and luminal space of some visceral yolk sac
  • + visceral yolk sac cavity SubClassOf luminal space of some visceral yolk sac

Changes for: abductor pollicis longus

• Deleted
  • - abductor pollicis longus SubClassOf has muscle antagonist some adductor pollicis muscle
• Added
  • + abductor pollicis longus SubClassOf has muscle antagonist some adductor pollicis muscle

Changes for: flexor digitorum profundus

• Deleted
  • - flexor digitorum profundus SubClassOf has muscle antagonist some extensor digitorum communis
• Added
  • + flexor digitorum profundus SubClassOf has muscle antagonist some extensor digitorum communis

Changes for: skin mucous gland

• Added
  • + skin mucous gland SubClassOf exocrine gland of integumental system

Changes for: pronator teres

• Deleted
  • - pronator teres SubClassOf has muscle antagonist some supinator muscle
• Added
  • + pronator teres SubClassOf has muscle antagonist some supinator muscle

Changes for: metacarpal bone of digit 5

• Added
  • + metacarpal bone of digit 5 has related synonym forelimb digit 5 metacarpus { database cross reference=EMAPA:19120 }

Changes for: metacarpal bone of digit 4

• Added
  • + metacarpal bone of digit 4 has related synonym forelimb digit 4 metacarpus { database cross reference=EMAPA:19118 }

Changes for: metacarpal bone of digit 3

• Added
  • + metacarpal bone of digit 3 has related synonym forelimb digit 3 metacarpus { database cross reference=EMAPA:19116 }

Changes for: metacarpal bone of digit 2

• Added
  • + metacarpal bone of digit 2 has related synonym forelimb digit 2 metacarpus { database cross reference=EMAPA:19114 }

Changes for: biceps brachii

• Deleted
  • - biceps brachii SubClassOf has muscle antagonist some triceps brachii
• Added
  • + biceps brachii SubClassOf has muscle antagonist some triceps brachii

Changes for: triceps brachii

• Deleted
  • - triceps brachii SubClassOf has muscle antagonist some biceps brachii
• Added
  • + triceps brachii SubClassOf has muscle antagonist some biceps brachii

Changes for: stomodeal lumen

• Deleted
  • - stomodeal lumen EquivalentTo anatomical space and enclosed by some stomodeum
  • - stomodeal lumen SubClassOf enclosed by some stomodeum
• Added
  • + stomodeal lumen EquivalentTo anatomical space and luminal space of some stomodeum
  • + stomodeal lumen SubClassOf luminal space of some stomodeum

Changes for: kidney arterial blood vessel

• Added
  • + kidney arterial blood vessel has related synonym kidney arterial system { database cross reference=EMAPA:31436 }

Changes for: metacarpal bone of digit 1

• Added
  • + metacarpal bone of digit 1 has related synonym forelimb digit 1 metacarpus { database cross reference=EMAPA:19112 }

Changes for: larynx submucosa

• Added
  • + larynx submucosa has related synonym laryngeal submucosa { database cross reference=EMAPA:35474 }

Changes for: posterior nasal aperture

• Added
  • + posterior nasal aperture has exact synonym posterior nasal apperture { database cross reference=XAO:0000277 }

Changes for: metatarsal bone of digit 4

• Added
  • + metatarsal bone of digit 4 has related synonym hindlimb digit 4 metatarsus { database cross reference=EMAPA:19129 }

Changes for: kidney pelvis urothelium

• Added
  • + kidney pelvis urothelium has related synonym pelvic urothelium { database cross reference=EMAPA:28077 }

Changes for: metatarsal bone of digit 5

• Added
  • + metatarsal bone of digit 5 has related synonym hindlimb digit 5 metatarsus { database cross reference=EMAPA:19131 }

Changes for: respiratory system mucosa

• Added
  • + respiratory system mucosa has related synonym laryngeal mucous membrane { database cross reference=EMAPA:18334 }

Changes for: metatarsal bone of digit 1

• Added
  • + metatarsal bone of digit 1 has related synonym hindlimb digit 1 metatarsus { database cross reference=EMAPA:19123 }

Changes for: metatarsal bone of digit 2

• Added
  • + metatarsal bone of digit 2 has related synonym hindlimb digit 2 metatarsus { database cross reference=EMAPA:19125 }

Changes for: metatarsal bone of digit 3

• Added
  • + metatarsal bone of digit 3 has related synonym hindlimb digit 3 metatarsal { database cross reference=EMAPA:19127 }

Changes for: root of trochlear nerve

• Deleted
  • - trochlear nerve fibers label trochlear nerve fibers
• Added
  • + root of trochlear nerve EquivalentTo root of cranial nerve and continuous with some trochlear nerve
  • + root of trochlear nerve SubClassOf central nervous system cell part cluster
  • + root of trochlear nerve SubClassOf continuous with some trochlear nerve
  • + root of trochlear nerve SubClassOf part of some brainstem
  • + root of trochlear nerve label root of trochlear nerve

Changes for: triangular part of inferior frontal gyrus

• Added
  • + triangular part of inferior frontal gyrus has related synonym inferior frontal gyrus, pars triangularis { database cross reference=http://orcid.org/0000-0001-6755-0259 }

Changes for: orbital part of inferior frontal gyrus

• Added
  • + orbital part of inferior frontal gyrus has broad synonym pars orbitalis, inferior frontal gyrus { database cross reference=http://orcid.org/0000-0001-6755-0259 }

Changes for: pectoral appendage

• Deleted
  • - pectoral appendage SubClassOf has skeleton some pectoral appendage skeleton
• Added
  • + pectoral appendage SubClassOf has skeleton some pectoral appendage skeleton

Changes for: piriform cortex

• Deleted
  • - piriform cortex has related synonym cortex piriformis { database cross reference=http://en.wikipedia.org/wiki/Piriform_cortex , has synonym type=latin term }
• Added
  • + piriform cortex has exact synonym cortex piriformis { database cross reference=http://en.wikipedia.org/wiki/Piriform_cortex , has synonym type=latin term }

Changes for: cochlear nerve

• Added
  • + cochlear nerve has related synonym vestibulocochlear nerve cochlear component { database cross reference=EMAPA:17802 }

Changes for: cervical mucosa

• Deleted
  • - cervical mucosa SubClassOf reproductive system mucosa
• Added
  • + cervical mucosa SubClassOf endometrium

Changes for: cervical gland

• Deleted
  • - cervical gland SubClassOf female reproductive gland
• Added
  • + cervical gland SubClassOf endometrial gland

Changes for: thyroid follicular lumen

• Deleted
  • - thyroid follicular lumen EquivalentTo anatomical space and enclosed by some thyroid follicle
  • - thyroid follicular lumen SubClassOf enclosed by some thyroid follicle
• Added
  • + thyroid follicular lumen EquivalentTo anatomical space and luminal space of some thyroid follicle
  • + thyroid follicular lumen SubClassOf luminal space of some thyroid follicle

Changes for: male urethral meatus

• Added
  • + male urethral meatus database cross reference MA:0002642
  • + male urethral meatus has exact synonym male urethra ostium { database cross reference=MA:0002642 }

Changes for: urinary bladder vasculature

• Added
  • + urinary bladder vasculature has related synonym blood vessel of bladder { database cross reference=EMAPA:28679 }

Changes for: paired limb/fin

• Deleted
  • - paired limb/fin SubClassOf has skeleton some paired limb/fin skeleton
• Added
  • + paired limb/fin SubClassOf has skeleton some paired limb/fin skeleton

Changes for: pelvic appendage

• Deleted
  • - pelvic appendage SubClassOf has skeleton some pelvic appendage skeleton
• Added
  • + pelvic appendage SubClassOf has skeleton some pelvic appendage skeleton

Changes for: dorsal thalamus

• Added
  • + dorsal thalamus database cross reference DMBA:DTTh
  • + dorsal thalamus has related synonym dorsal tier of thalamus { database cross reference=DMBA:DTTh }

Changes for: white matter of midbrain

• Added
  • + white matter of midbrain database cross reference HBA:MESWM
  • + white matter of midbrain has exact synonym mesencephalic white matter { database cross reference=HBA:MESWM }

Changes for: lamina of gray matter of spinal cord

• Added
  • + lamina of gray matter of spinal cord EquivalentTo nervous system cell part layer and part of some gray matter of spinal cord
  • + lamina of gray matter of spinal cord SubClassOf nervous system cell part layer

Changes for: cortical amygdaloid nucleus

• Added
  • + cortical amygdaloid nucleus database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2640
  • + cortical amygdaloid nucleus has related synonym posterior cortical amygdalar nucleus { database cross reference=NeuroNames:2640 }

Changes for: gastrocnemius

• Deleted
  • - gastrocnemius SubClassOf has muscle antagonist some tibialis anterior
• Added
  • + gastrocnemius SubClassOf has muscle antagonist some tibialis anterior

Changes for: fibularis longus

• Deleted
  • - fibularis longus SubClassOf has muscle antagonist some tibialis anterior
• Added
  • + fibularis longus SubClassOf has muscle antagonist some tibialis anterior

Changes for: soleus muscle

• Deleted
  • - soleus muscle SubClassOf has muscle antagonist some tibialis anterior
• Added
  • + soleus muscle SubClassOf has muscle antagonist some tibialis anterior

Changes for: tibialis anterior

• Deleted
  • - tibialis anterior SubClassOf has muscle antagonist some gastrocnemius
  • - tibialis anterior SubClassOf has muscle antagonist some soleus muscle
  • - tibialis anterior SubClassOf has muscle antagonist some tibialis posterior
• Added
  • + tibialis anterior SubClassOf has muscle antagonist some gastrocnemius
  • + tibialis anterior SubClassOf has muscle antagonist some soleus muscle
  • + tibialis anterior SubClassOf has muscle antagonist some tibialis posterior

Changes for: central nervous system gray matter layer

• Deleted
  • - central nervous system gray matter layer EquivalentTo organ component layer and part of some gray matter
  • - central nervous system gray matter layer SubClassOf ectoderm-derived structure
  • - central nervous system gray matter layer SubClassOf organ component layer
  • - central nervous system gray matter layer SubClassOf part of some gray matter
• Added
  • + central nervous system gray matter layer EquivalentTo nervous system cell part layer and composed primarily of some gray matter
  • + central nervous system gray matter layer SubClassOf composed primarily of some gray matter
  • + central nervous system gray matter layer SubClassOf nervous system cell part layer

Changes for: central nervous system white matter layer

• Deleted
  • - central nervous system white matter layer EquivalentTo organ component layer and part of some white matter
  • - central nervous system white matter layer SubClassOf ectoderm-derived structure
  • - central nervous system white matter layer SubClassOf organ component layer
  • - central nervous system white matter layer SubClassOf part of some white matter
• Added
  • + central nervous system white matter layer EquivalentTo nervous system cell part layer and composed primarily of some white matter
  • + central nervous system white matter layer SubClassOf composed primarily of some white matter
  • + central nervous system white matter layer SubClassOf nervous system cell part layer

Changes for: pit organ

• Deleted
  • - pit organ SubClassOf anatomical cluster
• Added
  • + pit organ SubClassOf organ

Changes for: lacrimal sac

• Deleted
  • - lacrimal sac definition The lacrimal sac is the upper dilated end of the nasolacrimal duct, and is lodged in a deep groove formed by the lacrimal bone and frontal process of the maxilla. It connects the lacrimal canaliculi, which drain tears from the eye’s surface, and the nasolacrimal duct, which conveys this fluid into the nasal cavity. This is mainly for high amounts of tears, in which the lacrimal sac pumps inward and outward driven by the orbicularis muscle during blinking. It is oval in form and measures from 12 to 15 mm. in length; its upper end is closed and rounded; its lower is continued into the nasolacrimal duct. Its superficial surface is covered by a fibrous expansion derived from the medial palpebral ligament, and its deep surface is crossed by the lacrimal part of the Orbicularis oculi, which is attached to the crest on the lacrimal bone. Like the nasolacrimal duct, the sac is lined by stratified columnar epithelium with mucus-secreting goblet cells, with surrounding connective tissue. [WP,unvetted]. { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_sac }
  • - lacrimal sac editor note This class was created automatically from a combination of ontologies
  • - lacrimal sac has related synonym saccus lacrimalis { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_sac , has synonym type=latin term }
• Added
  • + lacrimal sac definition The upper dilated end of the nasolacrimal duct that is lodged in a deep groove formed by the lacrimal bone and frontal process of the maxilla; it connects the lacrimal canaliculi, which drain tears from the eye’s surface, and the nasolacrimal duct, which conveys this fluid into the nasal cavity; like the nasolacrimal duct, the sac is lined by stratified columnar epithelium with mucus-secreting goblet cells, and is surrounded by connective tissue. { database cross reference=MGI:anna }
  • + lacrimal sac has exact synonym lachrymal sac
  • + lacrimal sac has exact synonym lacrymal sac
  • + lacrimal sac has exact synonym saccus lacrimalis { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_sac , has synonym type=latin term }

Changes for: biceps femoris

• Deleted
  • - biceps femoris SubClassOf has muscle antagonist some quadriceps femoris
• Added
  • + biceps femoris SubClassOf has muscle antagonist some quadriceps femoris

Changes for: semitendinosus

• Deleted
  • - semitendinosus SubClassOf has muscle antagonist some quadriceps femoris
• Added
  • + semitendinosus SubClassOf has muscle antagonist some quadriceps femoris

Changes for: rectus femoris

• Deleted
  • - rectus femoris SubClassOf has muscle antagonist some hamstring muscle
• Added
  • + rectus femoris SubClassOf has muscle antagonist some hamstring muscle

Changes for: gluteus maximus

• Deleted
  • - gluteus maximus SubClassOf has muscle antagonist some iliacus muscle
  • - gluteus maximus SubClassOf has muscle antagonist some psoas major muscle
  • - gluteus maximus SubClassOf has muscle antagonist some psoas minor muscle
• Added
  • + gluteus maximus SubClassOf has muscle antagonist some iliacus muscle
  • + gluteus maximus SubClassOf has muscle antagonist some psoas major muscle
  • + gluteus maximus SubClassOf has muscle antagonist some psoas minor muscle

Changes for: iliacus muscle

• Deleted
  • - iliacus muscle SubClassOf has muscle antagonist some gluteus maximus
• Added
  • + iliacus muscle SubClassOf has muscle antagonist some gluteus maximus

Changes for: cavity of right ventricle

• Deleted
  • - cavity of right ventricle EquivalentTo anatomical cavity and enclosed by some heart right ventricle
  • - cavity of right ventricle SubClassOf enclosed by some heart right ventricle
• Added
  • + cavity of right ventricle EquivalentTo anatomical cavity and luminal space of some heart right ventricle
  • + cavity of right ventricle SubClassOf luminal space of some heart right ventricle

Changes for: stomach fundus lumen

• Deleted
  • - stomach fundus lumen EquivalentTo anatomical space and enclosed by some fundus of stomach
  • - stomach fundus lumen SubClassOf enclosed by some fundus of stomach
• Added
  • + stomach fundus lumen EquivalentTo anatomical space and luminal space of some fundus of stomach
  • + stomach fundus lumen SubClassOf luminal space of some fundus of stomach

Changes for: ovarian follicle

• Deleted
  • - ovarian follicle has exact synonym ovary follicle
• Added
  • + ovarian follicle comment Editor notes: TODO - align subtypes based on staging, which is taxon-specific
  • + ovarian follicle has exact synonym follicle of ovary viewed macroscopically { database cross reference=FMA:18640 }
  • + ovarian follicle has exact synonym ovary follicle { database cross reference=MA:0001707 }

Changes for: cumulus oophorus

• Deleted
  • - cumulus oophorus has exact synonym cumulus ovaricus
• Added
  • + cumulus oophorus has exact synonym cumulus ovaricus { database cross reference=FMA:18659 , has synonym type=latin term }
  • + cumulus oophorus has exact synonym discus proligerus
  • + cumulus oophorus has exact synonym ovarian cumulus { database cross reference=GO:0001550 }

Changes for: germinal epithelium of ovary

• Added
  • + germinal epithelium of ovary has related synonym ovary surface epithelium { database cross reference=EMAPA:17963 }

Changes for: vagus X nerve trunk

• Added
  • + vagus X nerve trunk has related synonym vagal nerve trunk { database cross reference=EMAPA:17272 }

Changes for: cavum septum pellucidum

• Deleted
  • - cavum septum pellucidum EquivalentTo anatomical space and enclosed by some septum pellucidum
  • - cavum septum pellucidum SubClassOf enclosed by some septum pellucidum
  • - cavum septum pellucidum definition Space enclosed within the laminae of the septum pelludicum, the membranous partition that seperates the frontal horns of the ventricle. contains cerebrospinal fluid (CSF) that filters from the ventricles through the septal laminae. bounded anteriorly by the genu of the corpus callosum; superiorly by the body of the corpus callosum; posteriorly by the anterior limb and pillars of the fornix; inferiorly by the anterior commissure and the rostrum of the corpus callosum; and laterally by the leaflets of the septum pellucidum. { database cross reference=http://en.wikipedia.org/wiki/Cave_of_septum_pellucidum , database cross reference=BTO:0003447 }
• Added
  • + cavum septum pellucidum EquivalentTo anatomical space and luminal space of some septum pellucidum
  • + cavum septum pellucidum SubClassOf adjacent to some lamina of septum pellucidum
  • + cavum septum pellucidum SubClassOf luminal space of some septum pellucidum
  • + cavum septum pellucidum definition A space enclosed within the laminae of the septum pelludicum, the membranous partition that seperates the frontal horns of the ventricle. contains cerebrospinal fluid (CSF) that filters from the ventricles through the septal laminae. bounded anteriorly by the genu of the corpus callosum; superiorly by the body of the corpus callosum; posteriorly by the anterior limb and pillars of the fornix; inferiorly by the anterior commissure and the rostrum of the corpus callosum; and laterally by the leaflets of the septum pellucidum. { database cross reference=http://en.wikipedia.org/wiki/Cave_of_septum_pellucidum , database cross reference=BTO:0003447 }

Changes for: prostate field

• Deleted
  • - prostate field SubClassOf urogenital sinus epithelium
  • - prostate field has exact synonym prostate primordium
• Added
  • + prostate field EquivalentTo anlage and has potential to develop into some prostate gland
  • + prostate field SubClassOf anlage
  • + prostate field SubClassOf embryonic tissue
  • + prostate field SubClassOf has potential to develop into some prostate gland
  • + prostate field SubClassOf mesoderm-derived structure
  • + prostate field has related synonym prostate primordium

Changes for: urogenital sinus lumen

• Deleted
  • - urogenital sinus lumen EquivalentTo anatomical space and enclosed by some primitive urogenital sinus
  • - urogenital sinus lumen SubClassOf enclosed by some primitive urogenital sinus
• Added
  • + urogenital sinus lumen EquivalentTo anatomical space and luminal space of some primitive urogenital sinus
  • + urogenital sinus lumen SubClassOf luminal space of some primitive urogenital sinus

Changes for: metapodium region

• Deleted
  • - metapodium region SubClassOf has skeleton some metapodial skeleton
• Added
  • + metapodium region SubClassOf has skeleton some metapodial skeleton

Changes for: tarsal skeleton

• Added
  • + tarsal skeleton has exact synonym tarsalia { database cross reference=XAO:0003211 }

Changes for: secondary heart field

• Added
  • + secondary heart field SubClassOf anlage

Changes for: lung blood vessel

• Added
  • + lung blood vessel has related synonym pulmonary vascular element { database cross reference=EMAPA:32867 }

Changes for: lunate sulcus

• Added
  • + lunate sulcus SubClassOf occipital sulcus

Changes for: intralingual sulcus

• Added
  • + intralingual sulcus SubClassOf occipital sulcus

Changes for: main bronchus blood vessel

• Added
  • + main bronchus blood vessel has related synonym primary bronchus vascular element { database cross reference=EMAPA:16852 }
  • + main bronchus blood vessel has related synonym principal bronchus vascular element { database cross reference=EMAPA:16852 }

Changes for: posterior calcarine sulcus

• Deleted
  • - posterior calcarine sulcus SubClassOf sulcus of brain
• Added
  • + posterior calcarine sulcus SubClassOf occipital sulcus

Changes for: transverse occipital sulcus

• Deleted
  • - transverse occipital sulcus SubClassOf sulcus of brain
• Added
  • + transverse occipital sulcus SubClassOf occipital sulcus

Changes for: anterior occipital sulcus

• Added
  • + anterior occipital sulcus SubClassOf occipital sulcus

Changes for: dentate gyrus polymorphic layer

• Added
  • + dentate gyrus polymorphic layer database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_42439

Changes for: trapezoid body

• Deleted
  • - trapezoid body SubClassOf brainstem white matter
  • - trapezoid body SubClassOf white matter of hindbrain
• Added
  • + trapezoid body SubClassOf white matter of pontine tegmentum

Changes for: tectopontine tract

• Deleted
  • - tectopontine tract database cross reference BAMS:tp
  • - tectopontine tract has related synonym Thalamic peduncles { database cross reference=BAMS:tp }
  • - tectopontine tract has related synonym thalamic peduncles { database cross reference=BAMS:tp }

Changes for: ventral posteromedial nucleus of thalamus

• Added
  • + ventral posteromedial nucleus of thalamus has exact synonym posteromedial ventral nucleus of thalamus { database cross reference=FMA:62202 }

Changes for: intermediate acoustic stria

• Deleted
  • - intermediate acoustic stria SubClassOf brainstem white matter
  • - intermediate acoustic stria SubClassOf white matter of hindbrain
• Added
  • + intermediate acoustic stria SubClassOf white matter of pontine tegmentum

Changes for: rostral intralaminar nuclear group

• Added
  • + rostral intralaminar nuclear group has exact synonym anterior group of intralaminar nuclei { database cross reference=DHBA:AILN }
  • + rostral intralaminar nuclear group has exact synonym rostral group of intralaminar nuclei { database cross reference=HBA:ILr }

Changes for: adductor pollicis muscle

• Deleted
  • - adductor pollicis muscle SubClassOf has muscle antagonist some abductor pollicis brevis muscle
  • - adductor pollicis muscle SubClassOf has muscle antagonist some abductor pollicis longus
• Added
  • + adductor pollicis muscle SubClassOf has muscle antagonist some abductor pollicis brevis muscle
  • + adductor pollicis muscle SubClassOf has muscle antagonist some abductor pollicis longus
  • + adductor pollicis muscle has related synonym adductor digiti primi { database cross reference=EMAPA:36213 }

Changes for: preolivary nucleus

• Added
  • + preolivary nucleus database cross reference HBA:PrO

Changes for: larynx connective tissue

• Added
  • + larynx connective tissue has related synonym laryngeal connective tissue { database cross reference=EMAPA:35471 }

Changes for: anconeus muscle

• Added
  • + anconeus muscle has related synonym aconeus { database cross reference=EMAPA:36181 }

Changes for: bronchus connective tissue

• Added
  • + bronchus connective tissue has related synonym bronchial connective tissue { database cross reference=EMAPA:35193 }
  • + bronchus connective tissue has related synonym bronchial mesenchyme { database cross reference=EMAPA:32690 }

Changes for: main bronchus connective tissue

• Added
  • + main bronchus connective tissue has related synonym primary bronchus mesenchyme { database cross reference=EMAPA:16850 }
  • + main bronchus connective tissue has related synonym principal bronchus mesenchyme { database cross reference=EMAPA:16850 }

Changes for: lateral dorsal nucleus

• Added
  • + lateral dorsal nucleus database cross reference HBA:DTLd
  • + lateral dorsal nucleus has related synonym lateral group of nuclei, dorsal division { database cross reference=HBA:DTLd }

Changes for: opercular part of inferior frontal gyrus

• Added
  • + opercular part of inferior frontal gyrus has broad synonym inferior frontal gyrus, pars opercularis { database cross reference=http://orcid.org/0000-0001-6755-0259 }

Changes for: medial superior olivary nucleus

• Added
  • + medial superior olivary nucleus database cross reference HBA:MSO

Changes for: decussation of trochlear nerve

• Added
  • + decussation of trochlear nerve SubClassOf continuous with some trochlear nerve
  • + decussation of trochlear nerve SubClassOf part of some pontine tegmentum
  • + decussation of trochlear nerve SubClassOf structure with developmental contribution from neural crest

Changes for: root of abducens nerve

• Deleted
  • - abducens nerve fibers SubClassOf has part some part of some medulla oblongata
  • - abducens nerve fibers label abducens nerve fibers
• Added
  • + root of abducens nerve EquivalentTo root of cranial nerve and continuous with some abducens nerve
  • + root of abducens nerve SubClassOf central nervous system cell part cluster
  • + root of abducens nerve SubClassOf continuous with some abducens nerve
  • + root of abducens nerve SubClassOf part of some medulla oblongata
  • + root of abducens nerve label root of abducens nerve

Changes for: ventral nuclear group

• Added
  • + ventral nuclear group database cross reference DMBA:V

Changes for: anterior transverse temporal gyrus

• Deleted
  • - anterior transverse temporal gyrus has exact synonym first transverse gyrus of heschl
  • - anterior transverse temporal gyrus has exact synonym great transverse gyrus of heschl
• Added
  • + anterior transverse temporal gyrus database cross reference FMA:71029
  • + anterior transverse temporal gyrus database cross reference HBA:HG
  • + anterior transverse temporal gyrus database cross reference http://en.wikipedia.org/wiki/Transverse_temporal_gyrus
  • + anterior transverse temporal gyrus definition The transverse temporal gyri (also called Heschl’s gyri or Heschl’s convolutions) are found in the area of primary auditory cortex in the superior temporal gyrus of the human brain, occupying Brodmann areas 41 and 42. It is the first cortical structure to process incoming auditory information. Anatomically, the transverse temporal gyri are distinct in that they run mediolaterally (towards the center of the brain) rather than dorsiventrally (front to back) as all other temporal lobe gyri run. The Heschl’s gyri are named after Richard L. Heschl. { database cross reference=http://en.wikipedia.org/wiki/Transverse_temporal_gyrus }
  • + anterior transverse temporal gyrus has exact synonym first transverse gyrus of Heschl
  • + anterior transverse temporal gyrus has exact synonym great transverse gyrus of Heschl

Changes for: lateral superior olivary nucleus

• Added
  • + lateral superior olivary nucleus database cross reference HBA:LSO

Changes for: inferior precentral sulcus

• Deleted
  • - inferior precentral sulcus SubClassOf sulcus of brain
• Added
  • + inferior precentral sulcus SubClassOf frontal sulcus
  • + inferior precentral sulcus SubClassOf part of some precentral sulcus

Changes for: anterior cingulate gyrus

• Added
  • + anterior cingulate gyrus has broad synonym cingulate gyrus, anterior division { database cross reference=http://orcid.org/0000-0001-6755-0259 }

Changes for: penicillar arteriole

• Deleted
  • - penicillar arteriole SubClassOf abdomen blood vessel
  • - penicillar arteriole SubClassOf arteriole
• Added
  • + penicillar arteriole SubClassOf splenic arteriole

Changes for: endometrium

• Deleted
  • - endometrium SubClassOf organ component layer
  • - endometrium SubClassOf reproductive structure
  • - endometrium external ontology notes in FMA this is subdivided into basal and outer. In MA there is a single child term, endometrium epithelium { external ontology=FMA }
• Added
  • + endometrium EquivalentTo mucosa and part of some uterus
  • + endometrium SubClassOf part of some uterus
  • + endometrium SubClassOf reproductive system mucosa
  • + endometrium external ontology notes in FMA this is subdivided into basal and outer { external ontology=FMA }
  • + endometrium has related synonym uterine mucosa

Changes for: proximal convoluted tubule

• Added
  • + proximal convoluted tubule has related synonym kidney proximal convoluted tubule { database cross reference=EMAPA:28287 }
  • + proximal convoluted tubule has related synonym renal proximal convoluted tubule { database cross reference=UBERON:cjm }

Changes for: strand of wool

• Added
  • + strand of wool definition A strand of pelage hair
  • + strand of wool has related synonym strand of wool hair

Changes for: ischium

• Added
  • + ischium has exact synonym ischial bone { database cross reference=EMAPA:18727 }
  • + ischium has exact synonym ischium bone

Changes for: ilium

• Added
  • + ilium has exact synonym iliac bone { database cross reference=EMAPA:18726 }

Changes for: pelvic girdle region

• Deleted
  • - pelvic girdle region SubClassOf has skeleton some pelvic girdle skeleton
• Added
  • + pelvic girdle region SubClassOf has skeleton some pelvic girdle skeleton

Changes for: lumbar spinal cord

• Added
  • + lumbar spinal cord database cross reference MA:0003083
  • + lumbar spinal cord has exact synonym spinal cord lumbar segment { database cross reference=MA:0003083 }

Changes for: dorsal acoustic stria

• Deleted
  • - dorsal acoustic stria SubClassOf brainstem white matter
  • - dorsal acoustic stria SubClassOf white matter of hindbrain
• Added
  • + dorsal acoustic stria SubClassOf white matter of pontine tegmentum

Changes for: trigone of urinary bladder

• Deleted
  • - trigone of urinary bladder definition The trigone is a smooth triangular region of the internal urinary bladder formed by the two ureteral orifices and the internal urethral orifice. The area is very sensitive to expansion and once stretched to a certain degree, the urinary bladder signals the brain of its need to empty. The signals become stronger as the bladder continues to fill. Embryologically, the trigone of the Bladder is derived from the caudal end of mesonephric ducts. In the Female the mesonephric ducts break down but, thus, the Trigone of the Bladder is less prominent but, still present. [WP,unvetted]. { database cross reference=http://en.wikipedia.org/wiki/Trigone_of_urinary_bladder }
• Added
  • + trigone of urinary bladder definition A smooth triangular region of the internal urinary bladder formed by the two ureteral orifices and the internal urethral orifice. { database cross reference=http://en.wikipedia.org/wiki/Trigone_of_urinary_bladder }
  • + trigone of urinary bladder development notes Embryologically, the trigone of the bladder is derived from the caudal end of mesonephric ducts, which is of mesodermal origin (the rest of the bladder is endodermal). In the female the mesonephric ducts regresses, causing the trigone to be less prominent, but still present.
  • + trigone of urinary bladder function notes The area is very sensitive to expansion and once stretched to a certain degree, the urinary bladder signals the brain of its need to empty. The signals become stronger as the bladder continues to fill.
  • + trigone of urinary bladder has related synonym dorsal bladder neck { database cross reference=EMAPA:35174 }

Changes for: muscularis mucosae of intestine

• Deleted
  • - muscularis mucosae of intestine has exact synonym intestine muscularis mucosa
• Added
  • + muscularis mucosae of intestine has exact synonym intestine muscularis mucosa { database cross reference=MA:0002694 }
  • + muscularis mucosae of intestine has related synonym intestinal muscularis mucosa { database cross reference=EMAPA:35442 }

Changes for: crypt of Lieberkuhn of small intestine

• Deleted
  • - crypt of Lieberkuhn of small intestine definition A crypt of lieberkuhn that is part of a small intestine [Automatically generated definition]. { database cross reference=OBOL:automatic }
• Added
  • + crypt of Lieberkuhn of small intestine definition A crypt of Lieberkuhn that is part of a small intestine [Automatically generated definition]. { database cross reference=OBOL:automatic }

Changes for: lunge feeding vibrissa

• Deleted
  • - lunge feeding vibrissa SubClassOf structure with developmental contribution from neural crest

Changes for: anus

• Deleted
  • - anus database cross reference FBbt:00001893

Changes for: collecting duct of renal tubule

• Added
  • + collecting duct of renal tubule has related synonym ureteric tree { database cross reference=EMAPA:28407 }

Changes for: adrenal gland X zone

• Deleted
  • - adrenal gland X zone SubClassOf part of some female organism
  • - adrenal gland X zone definition A wide juxta-medullary layer of cells in the adrenal glands of young mature virgin female mice. { database cross reference=http://www.jstor.org/pss/82802 }
• Added
  • + adrenal gland X zone definition A transient cortical layer juxtaposed to the medulla and the zona reticularis; in males, this zone rapidly involutes at the onset of puberty whereas this zone persists in females until the first pregnancy or later in adulthood in non-pregnant females { database cross reference=MP:0008296 }
  • + adrenal gland X zone has broad synonym X zone { database cross reference=MP:0008296 }
  • + adrenal gland X zone has broad synonym x-zone { database cross reference=MP:0008296 }

Changes for: Peyer’s patch

• Deleted
  • - Peyer’s patch has exact synonym noduli lymphoidei aggregati intestini tenuis { database cross reference=FMA:76466 , database cross reference=FMA:TA , has synonym type=latin term }
• Added
  • + Peyer’s patch has exact synonym noduli lymphoidei aggregati { has synonym type=latin term }
  • + Peyer’s patch has related synonym Peyers gland { database cross reference=BTO:0001784 }
  • + Peyer’s patch has related synonym Peyers patch { database cross reference=BTO:0001784 }

Changes for: sulcus of brain

• Added
  • + sulcus of brain database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1208
  • + sulcus of brain database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Cerebral_Sulcus
  • + sulcus of brain has related synonym cerebral sulci { database cross reference=NeuroNames:1208 }
  • + sulcus of brain has related synonym cerebral sulcus { database cross reference=NeuroNames:1208 }

Changes for: rostral root of abducens nerve

• Deleted
  • - rostral root of abducens nerve SubClassOf ectoderm-derived structure
  • - rostral root of abducens nerve SubClassOf part of some abducens nerve

Changes for: root of optic nerve

• Deleted
  • - root of optic nerve EquivalentTo nerve root and continuous with some nerve connecting eye with brain
  • - root of optic nerve SubClassOf continuous with some nerve connecting eye with brain
• Added
  • + root of optic nerve EquivalentTo nerve root and continuous with some cranial nerve II
  • + root of optic nerve SubClassOf continuous with some cranial nerve II

Changes for: caudal root of abducens nerve

• Deleted
  • - caudal root of abducens nerve SubClassOf ectoderm-derived structure
  • - caudal root of abducens nerve SubClassOf part of some abducens nerve

Changes for: helicine branch of uterine artery

• Added
  • + helicine branch of uterine artery EquivalentTo helicine artery and branching part of some uterine artery
  • + helicine branch of uterine artery SubClassOf branching part of some uterine artery
  • + helicine branch of uterine artery SubClassOf part of some myometrium
  • + helicine branch of uterine artery comment Notes: The straight branches of the radial arteries of the uterus terminate in capillaries in the basal layer, while the spiral or coiled branches penetrate to the surface epithelium
  • + helicine branch of uterine artery has exact synonym arcuate artery of uterus

Changes for: helicine artery of penis

• Deleted
  • - helicine artery of penis SubClassOf reproductive structure
• Added
  • + helicine artery of penis EquivalentTo helicine artery and part of some penis
  • + helicine artery of penis SubClassOf part of some penis
  • + helicine artery of penis has exact synonym arteriae helicinae penis { database cross reference=http://en.wikipedia.org/wiki/Helicine_arteries_of_penis , has synonym type=latin term }

Changes for: uterine spiral artery

• Deleted
  • - uterine spiral artery SubClassOf uterine artery
• Added
  • + uterine spiral artery SubClassOf artery
  • + uterine spiral artery SubClassOf supplies some endometrium

Changes for: lumen of Rathke’s pouch

• Deleted
  • - lumen of Rathke’s pouch EquivalentTo anatomical space and enclosed by some Rathke’s pouch
  • - lumen of Rathke’s pouch SubClassOf enclosed by some Rathke’s pouch
• Added
  • + lumen of Rathke’s pouch EquivalentTo anatomical space and luminal space of some Rathke’s pouch
  • + lumen of Rathke’s pouch SubClassOf luminal space of some Rathke’s pouch

Changes for: helicine artery

• Added
  • + helicine artery SubClassOf part of some reproductive system
  • + helicine artery SubClassOf reproductive structure
  • + helicine artery database cross reference http://en.wikipedia.org/wiki/Helicine_arteries
  • + helicine artery definition Either the helicine artery of the penis or the helicine artery of the uterus { database cross reference=http://en.wikipedia.org/wiki/Helicine_arteries }

Changes for: iris nerve

• Deleted
  • - iris nerve EquivalentTo nerve and part of some iris
  • - iris nerve SubClassOf nerve of head region
  • - iris nerve SubClassOf neural crest-derived structure
  • - iris nerve SubClassOf part of some iris
  • - iris nerve definition A nerve that is part of a iris [Automatically generated definition]. { database cross reference=OBOL:automatic }
• Added
  • + iris nerve EquivalentTo nerve and innervates some iris
  • + iris nerve SubClassOf innervates some iris
  • + iris nerve SubClassOf nerve

Changes for: eyelid nerve

• Deleted
  • - eyelid nerve EquivalentTo nerve and part of some eyelid
  • - eyelid nerve SubClassOf ectoderm-derived structure
  • - eyelid nerve SubClassOf nerve of head region
  • - eyelid nerve SubClassOf part of some eyelid
  • - eyelid nerve definition A nerve that is part of a eyelid [Automatically generated definition]. { database cross reference=OBOL:automatic }
• Added
  • + eyelid nerve EquivalentTo nerve and innervates some eyelid
  • + eyelid nerve SubClassOf innervates some eyelid
  • + eyelid nerve SubClassOf nerve
  • + eyelid nerve definition A nerve that innervates an eyelid. { database cross reference=UBERON:cjm }
  • + eyelid nerve has exact synonym palpebral nerve { database cross reference=OBOL:automatic }

Changes for: medial gland of ocular region

• Deleted
  • - medial gland of ocular region EquivalentTo gland and part of some ocular region and intersects midsagittal plane of some orbit of skull
  • - medial gland of ocular region SubClassOf intersects midsagittal plane of some orbit of skull
  • - medial gland of ocular region SubClassOf neural crest-derived structure
  • - medial gland of ocular region SubClassOf part of some ocular region
  • - medial gland of ocular region definition A gland that intersects the midsagittal plane of a orbital region and is part of a orbital region. { database cross reference=OBOL:automatic }
• Added
  • + medial gland of ocular region definition A gland that is located in the ocular region, nearer the inner canthi. Typically associated with or part of the nictitating membrane, when present { database cross reference=http://www.ncbi.nlm.nih.gov/pubmed/7559104 }
  • + medial gland of ocular region has exact synonym medial ocular gland
  • + medial gland of ocular region has exact synonym medial orbital gland
  • + medial gland of ocular region has narrow synonym Harderian gland
  • + medial gland of ocular region taxon notes Rabbits, pigs and Mongolian gerbils have both a Harderian and a nictitans gland[ISBN:1118473523]
  • + medial gland of ocular region taxon notes the distinction between Harderian and nictitans gland is only valid in mammals - the medial ocular glands in other terapods are called Harderian glands regardless of their secretion[doi:10.1007/978-3-642-76685-5_2]

Changes for: lateral gland of orbital region

• Deleted
  • - lateral gland of orbital region EquivalentTo gland and part of some ocular region and in lateral side of some ocular region
  • - lateral gland of orbital region SubClassOf in lateral side of some ocular region
  • - lateral gland of orbital region SubClassOf lateral structure
  • - lateral gland of orbital region SubClassOf part of some ocular region
  • - lateral gland of orbital region definition A gland that is in_the_lateral_side_of a orbital region and is part of a orbital region. { database cross reference=OBOL:automatic }
  • - lateral gland of orbital region implements design pattern https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern
• Added
  • + lateral gland of orbital region curator notes The class name or definition should not be taken to mean strictly in the lateral ocular region. We place the extraocular lacrimal glands, even though they are as the name suggests outside the ocular region. The class exists as the division between lateral vs medial (Harderian, nictitans) glands is standard, e.g. http://www.ncbi.nlm.nih.gov/pubmed/7559104
  • + lateral gland of orbital region definition A gland that is located in or around the ocular region, nearer the outer canthi. { database cross reference=UBERON:cjm }
  • + lateral gland of orbital region has exact synonym lateral ocular gland
  • + lateral gland of orbital region has exact synonym lateral orbital gland

Changes for: lumen of oropharynx

• Deleted
  • - lumen of oropharynx EquivalentTo anatomical space and enclosed by some oropharynx
  • - lumen of oropharynx SubClassOf enclosed by some oropharynx
• Added
  • + lumen of oropharynx EquivalentTo anatomical space and luminal space of some oropharynx
  • + lumen of oropharynx SubClassOf luminal space of some oropharynx

Changes for: Harderian gland duct

• Deleted
  • - Harderian gland duct comment The duct of the gland opens into the conjunctival sac at the base of the nictitating membrane.
  • - Harderian gland duct definition A duct that is part of a Harderian gland. { database cross reference=OBOL:automatic }
• Added
  • + Harderian gland duct definition A duct that is part of a Harderian gland. opens into the conjunctival sac at the base of the nictitating membrane. { database cross reference=http://www.ncbi.nlm.nih.gov/pubmed/7559104 }
  • + Harderian gland duct taxon notes Typically a single duct per gland, but Harderian glands can have more than 1 duct, e.g. in lizards, amphisbaenids and primitive snakes (Bellairs & Boyd, 1947) and possibly some avian species (Burns, 1992)

Changes for: gland of ocular region

• Deleted
  • - gland of ocular region definition A gland that is part of a orbital region. { database cross reference=OBOL:automatic }
• Added
  • + gland of ocular region definition A gland that is typically found in or near the orbital region, in or around either the medial or lateral canthi, and is typically associated with secretions onto the eyeball or associated ducts. Includes the Harderian, nictitans and lacrimal glands. { database cross reference=UBERON:cjm }
  • + gland of ocular region has exact synonym ocular gland
  • + gland of ocular region has related synonym orbital gland
  • + gland of ocular region taxon notes the only orbital gland found in anuran amphibians is either the Harderian or the lacrimal; if it is a lacrimal, then a progressive lateral migration of the lacrimal glands must occur through the amniotes[PMID:7559104]
  • + gland of ocular region taxon notes the only orbital gland found in anuran amphibians is the Harderian[PMID:8843648]

Changes for: bladder lumen

• Deleted
  • - bladder lumen EquivalentTo anatomical space and enclosed by some urinary bladder
  • - bladder lumen SubClassOf enclosed by some urinary bladder
• Added
  • + bladder lumen EquivalentTo anatomical space and luminal space of some urinary bladder
  • + bladder lumen SubClassOf luminal space of some urinary bladder

Changes for: ophthalmotemporal branch of external ophthalmic artery

• Deleted
  • - ophthalmotemporal branch of external ophthalmic artery SubClassOf lacrimal artery
• Added
  • + ophthalmotemporal branch of external ophthalmic artery SubClassOf head blood vessel
  • + ophthalmotemporal branch of external ophthalmic artery SubClassOf mixed endoderm/mesoderm-derived structure
  • + ophthalmotemporal branch of external ophthalmic artery SubClassOf structure with developmental contribution from neural crest
  • + ophthalmotemporal branch of external ophthalmic artery SubClassOf systemic artery

Changes for: conjunctival space

• Deleted
  • - conjunctival space EquivalentTo anatomical space and enclosed by some conjunctiva
  • - conjunctival space SubClassOf enclosed by some conjunctiva
• Added
  • + conjunctival space EquivalentTo anatomical space and luminal space of some conjunctiva
  • + conjunctival space SubClassOf luminal space of some conjunctiva

Changes for: lumen of primary bronchus

• Deleted
  • - lumen of primary bronchus EquivalentTo anatomical space and enclosed by some main bronchus
  • - lumen of primary bronchus SubClassOf enclosed by some main bronchus
• Added
  • + lumen of primary bronchus EquivalentTo anatomical space and luminal space of some main bronchus
  • + lumen of primary bronchus SubClassOf luminal space of some main bronchus

Changes for: bronchial lumen

• Deleted
  • - bronchial lumen EquivalentTo anatomical space and enclosed by some bronchus
  • - bronchial lumen SubClassOf enclosed by some bronchus
• Added
  • + bronchial lumen EquivalentTo anatomical space and luminal space of some bronchus
  • + bronchial lumen SubClassOf luminal space of some bronchus

Changes for: lumen of tertiary bronchus

• Deleted
  • - lumen of tertiary bronchus EquivalentTo anatomical space and enclosed by some segmental bronchus
  • - lumen of tertiary bronchus SubClassOf enclosed by some segmental bronchus
• Added
  • + lumen of tertiary bronchus EquivalentTo anatomical space and luminal space of some segmental bronchus
  • + lumen of tertiary bronchus SubClassOf luminal space of some segmental bronchus

Changes for: lumen of secondary bronchus

• Deleted
  • - lumen of secondary bronchus EquivalentTo anatomical space and enclosed by some lobar bronchus
  • - lumen of secondary bronchus SubClassOf enclosed by some lobar bronchus
• Added
  • + lumen of secondary bronchus EquivalentTo anatomical space and luminal space of some lobar bronchus
  • + lumen of secondary bronchus SubClassOf luminal space of some lobar bronchus

Changes for: lumen of parabronchus

• Deleted
  • - lumen of parabronchus EquivalentTo anatomical space and enclosed by some parabronchus
  • - lumen of parabronchus SubClassOf enclosed by some parabronchus
• Added
  • + lumen of parabronchus EquivalentTo anatomical space and luminal space of some parabronchus
  • + lumen of parabronchus SubClassOf luminal space of some parabronchus

Changes for: pinna hair

• Deleted
  • - pinna hair SubClassOf hair of head
• Added
  • + pinna hair SubClassOf strand of hair on external ear

Changes for: mesenchyme of submandibular gland

• Added
  • + mesenchyme of submandibular gland has related synonym submaxillary gland mesenchyme { database cross reference=EMAPA:18814 }

Changes for: nodosal placode

• Added
  • + nodosal placode has exact synonym nodose placodes { database cross reference=XAO:0004213 , has synonym type=plural term }
  • + nodosal placode has exact synonym vagal epibranchial placodes { database cross reference=XAO:0004213 , has synonym type=plural term }

Changes for: vestibulocochlear ganglion

• Added
  • + vestibulocochlear ganglion has exact synonym statoacoustic ganglion { database cross reference=XAO:0004142 }
  • + vestibulocochlear ganglion has related synonym vestibulocochlear ganglia { database cross reference=XAO:0004142 , has synonym type=plural term }

Changes for: vestibular ganglion

• Added
  • + vestibular ganglion has related synonym vestibulocochlear ganglion vestibular component { database cross reference=EMAPA:17573 }

Changes for: heart blood vessel

• Added
  • + heart blood vessel has related synonym cardiac blood vessel { database cross reference=EMAPA:35397 }

Changes for: diffuse reticular nucleus

• Deleted
  • - diffuse reticular nucleus SubClassOf brainstem nucleus
  • - diffuse reticular nucleus SubClassOf hindbrain nucleus
  • - diffuse reticular nucleus database cross reference DHBA:DRt
• Added
  • + diffuse reticular nucleus SubClassOf parabrachial nucleus
  • + diffuse reticular nucleus database cross reference DHBA:KF
  • + diffuse reticular nucleus database cross reference DHBA:SPB
  • + diffuse reticular nucleus database cross reference DMBA:KF
  • + diffuse reticular nucleus database cross reference FMA:77220
  • + diffuse reticular nucleus has exact synonym Koelliker-Fuse nucleus
  • + diffuse reticular nucleus has exact synonym Kölliker-Fuse nucleus
  • + diffuse reticular nucleus has exact synonym kolliker-Fuse nucleus { database cross reference=FMA:77220 }
  • + diffuse reticular nucleus has exact synonym nucleus subparabrachialis { has synonym type=latin term }
  • + diffuse reticular nucleus has exact synonym subparabrachial nucleus { database cross reference=FMA:77220 }

Changes for: small intestine Peyer’s patch

• Added
  • + small intestine Peyer’s patch fma set term http://purl.obolibrary.org/obo/FMA_76466
  • + small intestine Peyer’s patch has exact synonym noduli lymphoidei aggregati intestini tenuis { database cross reference=FMA:76466 , has synonym type=latin term }

Changes for: Grueneberg ganglion

• Added
  • + Grueneberg ganglion has related synonym Gruneberg ganglion { database cross reference=MA:0002891 }

Changes for: nictitans gland

• Deleted
  • - gland of nictitating membrane EquivalentTo gland and part of some nictitating membrane
  • - gland of nictitating membrane SubClassOf intersects midsagittal plane of some ocular region
  • - gland of nictitating membrane comment This gland is distinct from the other medial ocular gland, the Harderian gland, and is typified by clusters of glandular tissue within the nictitating membrane
  • - gland of nictitating membrane definition A gland producing tears in a third eyelid in the corner of each eye, as seen in animals. { database cross reference=ncithesaurus:Gland_of_the_Third_Eyelid }
  • - gland of nictitating membrane has exact synonym gland of the third eyelid { database cross reference=ncithesaurus:Gland_of_the_Third_Eyelid }
  • - gland of nictitating membrane has exact synonym nictitans gland
  • - gland of nictitating membrane label gland of nictitating membrane
• Added
  • + nictitans gland EquivalentTo medial gland of ocular region and produces some secretion of nictitans gland
  • + nictitans gland SubClassOf medial gland of ocular region
  • + nictitans gland SubClassOf produces some secretion of nictitans gland
  • + nictitans gland comment Disease notes: Prolapse of the Nicititans Gland is also known as Cherry Eye
  • + nictitans gland curator notes This gland is distinct from the other medial ocular gland, the Harderian gland, and is typified by clusters of glandular tissue within the nictitating membrane
  • + nictitans gland definition A gland producing tears in a third eyelid in the corner of each eye. { database cross reference=ncithesaurus:Gland_of_the_Third_Eyelid }
  • + nictitans gland has broad synonym gland of nictitating membrane
  • + nictitans gland has broad synonym gland of the third eyelid { database cross reference=ncithesaurus:Gland_of_the_Third_Eyelid }
  • + nictitans gland has related synonym superficial gland of the third eyelid { database cross reference=ISBN:1118473523 }
  • + nictitans gland label nictitans gland
  • + nictitans gland present in taxon http://purl.obolibrary.org/obo/NCBITaxon_10047 { source=ISBN:1118473523 }

Changes for: latissimus dorsi muscle

• Deleted
  • - latissimus dorsi muscle SubClassOf has muscle antagonist some deltoid
  • - latissimus dorsi muscle SubClassOf has muscle antagonist some trapezius muscle
• Added
  • + latissimus dorsi muscle SubClassOf has muscle antagonist some deltoid
  • + latissimus dorsi muscle SubClassOf has muscle antagonist some trapezius muscle

Changes for: left lobe of liver

• Added
  • + left lobe of liver has related synonym left hepatic lobe { database cross reference=EMAPA:18307 }

Changes for: right lobe of liver

• Added
  • + right lobe of liver has related synonym right hepatic lobe { database cross reference=EMAPA:18311 }

Changes for: spinal cord

• Added
  • + spinal cord has related synonym SpC { has synonym type=abbreviation }

Changes for: serratus dorsalis superior muscle

• Added
  • + serratus dorsalis superior muscle has exact synonym superior serratus posterior { database cross reference=FMA:13401 }

Changes for: serratus ventralis

• Deleted
  • - serratus ventralis SubClassOf has muscle antagonist some trapezius muscle
• Added
  • + serratus ventralis SubClassOf has muscle antagonist some trapezius muscle

Changes for: serratus dorsalis inferior muscle

• Added
  • + serratus dorsalis inferior muscle has exact synonym inferior serratus posterior { database cross reference=FMA:13402 }

Changes for: olfactory tract

• Added
  • + olfactory tract database cross reference HBA:olf

Changes for: parathyroid gland

• Added
  • + parathyroid gland has related synonym epithelial body { database cross reference=XAO:0000167 }

Changes for: bare area of liver

• Added
  • + bare area of liver has related synonym hepatic bare area { database cross reference=EMAPA:17945 }

Changes for: mammillary body

• Added
  • + mammillary body database cross reference DMBA:Mam
  • + mammillary body has related synonym mammillary area { database cross reference=DMBA:Mam }

Changes for: vermiform appendix

• Added
  • + vermiform appendix has related synonym apex of caecum { database cross reference=EMAPA:35140 }

Changes for: gustatory nucleus

• Deleted
  • - gustatory nucleus SubClassOf part of some nucleus of solitary tract

Changes for: right crus of diaphragm

• Added
  • + right crus of diaphragm has exact synonym external sphincter of esophagus { database cross reference=FMA:58286 }

Changes for: nerve root

• Deleted
  • - nerve root external ontology notes this ontology enforces strict part-disjointness between the CNS and PNS which poses challenges for modeling roots of nerves in a way that is consistent with other ontologies. Sometimes the root may be modeled as being entirely part of the brain or spinal cord, in other cases, part of the (peripheral) nerve. We make nerve root continuous_with nerve to avoid inconsistencies. FMA has segment of nerve with subtypes: segment of sympathetic trunk, nerve root, nerve rootlet, nerve root proper { external ontology=FMA }
• Added
  • + nerve root database cross reference FMA:82524
  • + nerve root external ontology notes this ontology enforces strict part-disjointness between the CNS and PNS which poses challenges for modeling roots of nerves in a way that is consistent with other ontologies. Sometimes the root may be modeled as being entirely part of the brain or spinal cord, in other cases, part of the (peripheral) nerve. We make nerve root continuous_with nerve to avoid inconsistencies. FMA has segment of nerve with subtypes: segment of sympathetic trunk, nerve root, nerve rootlet, nerve root proper. FMA also has ‘central zone of nerve’ which is the parent of cranial nerve tracts { external ontology=FMA }

Changes for: P3 area of pallium (Myxiniformes)

• Added
  • + P3 area of pallium (Myxiniformes) SubClassOf immediately deep to some P2 area of pallium (Myxiniformes)

Changes for: P2 area of pallium (Myxiniformes)

• Added
  • + P2 area of pallium (Myxiniformes) SubClassOf immediately deep to some P1 area of pallium (Myxiniformes)

Changes for: P5 area of pallium (Myxiniformes)

• Added
  • + P5 area of pallium (Myxiniformes) SubClassOf immediately deep to some P4 area of pallium (Myxiniformes)

Changes for: P4 area of pallium (Myxiniformes)

• Added
  • + P4 area of pallium (Myxiniformes) SubClassOf immediately deep to some P3 area of pallium (Myxiniformes)

Changes for: strand of guard hair

• Deleted
  • - strand of guard hair definition A long, straight truncal hair that contains two air cells in the medulla[MP]. A strand of hair from the top layer consisting of longer, often coarser, straight shafts of hair that stick out through the underfur. This is usually the visible layer for most mammals and contains most of the pigmentation. It protects the underfur from outside factors, such as rain, and is thus often water-repellent. { database cross reference=http://en.wikipedia.org/wiki/Guard_hair , database cross reference=MP:0006365 }
• Added
  • + strand of guard hair definition A long, straight truncal hair that contains two air cells in the medulla[MP]. A strand of hair from the top layer consisting of longer, often coarser, straight shafts of hair that stick out through the underfur. This is usually the visible layer for most mammals and contains most of the pigmentation. { database cross reference=http://en.wikipedia.org/wiki/Guard_hair , database cross reference=MP:0006365 }
  • + strand of guard hair function notes It protects the underfur from outside factors, such as rain, and is thus often water-repellent

Changes for: principal inferior olivary nucleus

• Added
  • + principal inferior olivary nucleus database cross reference HBA:PrIO

Changes for: distal segment of rib

• Added
  • + distal segment of rib has exact synonym distal rib segment

Changes for: gigantocellular nucleus

• Deleted
  • - gigantocellular nucleus definition The gigantocellular nucleus, as the name indicates, is mainly composed of the so called giant neuronal cells. This nucleus has been known to innervate the caudal hypoglossal nucleus, and responds to glutamateric stimuli. The gigantocellular nucleus excites the hypoglossal nucleus, and can play a role in the actions of the said nerve . This nucleus receives connections from the periaqueductal gray, the paraventricular hypothalamic nucleus, central nucleus of the amygdala, lateral hypothalamic area, and parvocellular reticular nucleus. Retrograde studies have shown that the deep mesencephalic reticular formation and oral pontine reticular nucleus project to the nucleus gigantocellularis. The dorsal rostral section of the nucleus reticularis gigantocellularis is also involved mediating in expiration (or out-breathing) along with the parvocellular nucleus. [WP,unvetted]. { database cross reference=http://en.wikipedia.org/wiki/Gigantocellular_nucleus }
  • - gigantocellular nucleus editor note This class was created automatically from a combination of ontologies
• Added
  • + gigantocellular nucleus database cross reference DHBA:GiRt
  • + gigantocellular nucleus database cross reference HBA:Gi
  • + gigantocellular nucleus database cross reference HBA:GiRt
  • + gigantocellular nucleus definition Nucleus located in the rostral ventrolateral medulla. The PGL was originally identified by cytoarchitectural criteria in the human medulla (Olszewski and Baxter, 1954). In humans, the PGL is located in the ventrolateral quadrant of the rostral medullary tegmentum between the nucleus subtrigeminalis caudally, trapezoid body and the superior olive rostrally, nucleus gigantocellularis medially, spinothalamic tract fibers laterally, inferior olive ventrally, and the nucleus ambiguous dorsally (Olszewski and Baxter, 1954). In the rat, the PGL has been further subdivided into retrofacial PGL (caudal to the facial nucleus), and more rostrally located juxtafacial PGL (medial to the facial nucleus), based upon different connectivity. { database cross reference=NIF_GrossAnatomy:nlx_anat_1005001 }
  • + gigantocellular nucleus has exact synonym gigantocellular group { database cross reference=HBA:GiRt }
  • + gigantocellular nucleus has exact synonym gigantocellular reticular nuclei { database cross reference=DHBA:GiRt }

Changes for: middle cerebellar peduncle

• Deleted
  • - middle cerebellar peduncle SubClassOf white matter of hindbrain
• Added
  • + middle cerebellar peduncle SubClassOf white matter of pons

Changes for: interpositus nucleus

• Added
  • + interpositus nucleus database cross reference DHBA:InP
  • + interpositus nucleus database cross reference DMBA:Int

Changes for: atrioventricular valve

• Added
  • + atrioventricular valve has related synonym atrio-ventricular valve { database cross reference=EMAPA:35154 }

Changes for: nerve fasciculus

• Deleted
  • - nerve fasciculus has exact synonym fasciculus
• Added
  • + nerve fasciculus database cross reference BTO:0002191
  • + nerve fasciculus has exact synonym fasciculus { has synonym type=latin term }
  • + nerve fasciculus has related synonym nerve fiber tract { database cross reference=BTO:0002191 }

Changes for: esophagus

• Deleted
  • - esophagus has related synonym œsophagus { database cross reference=http://en.wikipedia.org/wiki/Esophagus , has synonym type=latin term }

Changes for: pole of lens

• Added
  • + pole of lens has exact synonym lens zone { database cross reference=FMA:58067 }

Changes for: primordium

• Deleted
  • - primordium definition Primordia are populations of contiguous cells that are morphologically distinct and already correspond in extent to a later organ/tissue[FBbt]. An embryonic structure that is the rudiment or commencement of a part or organ. { database cross reference=http://en.wikipedia.org/wiki/Primordium , database cross reference=BTO:0001886 , database cross reference=FB:DJS , database cross reference=FB:FBrf0089570 , database cross reference=FB:FBrf0178740 }
  • - primordium editor note This class was created automatically from a combination of ontologies
• Added
  • + primordium definition Primordia are populations of contiguous cells that are morphologically distinct and already correspond in extent to a later organ/tissue[FBbt, Hartenstein, V. (2004)]. { database cross reference=http://flybase.org/reports/FBrf0178740.html , database cross reference=BTO:0001886 , database cross reference=FB:DJS , database cross reference=FB:FBrf0089570 }
  • + primordium has related synonym future organ
  • + primordium has related synonym primordia { database cross reference=XAO:0003043 , has synonym type=plural term }

Changes for: corpus cardiacum

• Deleted
  • - corpus cardiacum SubClassOf endocrine gland
  • - corpus cardiacum definition One of a pair of neurohemal organs located on the walls of the aorta just behind the brain. The corpora cardiaca release their store of PTTH only after they receive a signal from neurosecretory cells in the brain. { database cross reference=Endocrine system , database cross reference=BTO:0000432 }
• Added
  • + corpus cardiacum SubClassOf arthropod neurohemal organ
  • + corpus cardiacum definition One of a pair of neurohemal organs located on the walls of the aorta just behind the brain. The corpora cardiaca release their store of PTTH only after they receive a signal from neurosecretory cells in the brain. { database cross reference=Endocrine system , database cross reference=http://www.cals.ncsu.edu/course/ent425/tutorial/endocrine.html , database cross reference=BTO:0000432 }

Changes for: arthropod neurohemal organ

• Deleted
  • - neurohemal organ SubClassOf organ
  • - neurohemal organ label neurohemal organ
• Added
  • + arthropod neurohemal organ SubClassOf neuroendocrine gland
  • + arthropod neurohemal organ comment brain areas from which substances enter blood for example, the neurohypophysis from which oxytocin and vasopressin enter blood.
  • + arthropod neurohemal organ external ontology notes currently intended for invert structure; alt definitions include: organs in which intimate relationships between axons and terminal blood vessels are established
  • + arthropod neurohemal organ label arthropod neurohemal organ

Changes for: limb

• Deleted
  • - limb SubClassOf has skeleton some skeleton of limb
• Added
  • + limb SubClassOf has skeleton some skeleton of limb

Changes for: Malpighian tubule

• Deleted
  • - Malpighian tubule database cross reference FBbt:00001896
  • - Malpighian tubule definition The most important structure of the insect’s excretory organ, which may comprise cystiform or labyrinthine highly versatile tubules having their outlet into the inital section of the rectum[FBbt]. Any of a group of long blind vessels opening into the posterior part of the alimentary canal in most insects and some other arthropods and functioning primarily as excretory organs[BTO]. { database cross reference=http://en.wikipedia.org/wiki/Malpighian_tubule , database cross reference=ISBN:3110148986 }
• Added
  • + Malpighian tubule definition A tubule that extends from the posterior part of the digestive tract which absorbs solutes, water, and wastes from the surrounding hemolymph. Each tubule consists of a single layer of cells that is closed off at the distal end with the proximal end joining the alimentary canal at the junction between the midgut and hindgut[WP,modified]. { database cross reference=http://en.wikipedia.org/wiki/Malpighian_tubule_system }
  • + Malpighian tubule taxon notes It is unclear as to whether the Malpighian tubules of arachnids and those of the Uniramia are homologous or the result of convergent evolution.[Wikipedia:Malpighian_tubule_system]

Changes for: hindlimb

• Deleted
  • - hindlimb SubClassOf has skeleton some hindlimb skeleton
  • - hindlimb database cross reference EMAPA:17253
• Added
  • + hindlimb SubClassOf has skeleton some hindlimb skeleton

Changes for: forelimb

• Deleted
  • - forelimb SubClassOf has skeleton some forelimb skeleton
• Added
  • + forelimb SubClassOf has skeleton some forelimb skeleton

Changes for: corpus allatum

• Deleted
  • - corpus allatum definition One of a pair of separate or fused bodies in many insects that are sometimes closely associated with the corpora cardiaca and that secrete hormones (as juvenile hormone)[BTO]. { database cross reference=http://en.wikipedia.org/wiki/Corpora_allata , database cross reference=BTO:0000291 }
• Added
  • + corpus allatum definition One of a pair of separate or fused bodies in many insects that are sometimes closely associated with the corpora cardiaca and that secrete hormones (as juvenile hormone)[BTO]. { database cross reference=http://en.wikipedia.org/wiki/Corpora_allata , database cross reference=http://www.cals.ncsu.edu/course/ent425/tutorial/endocrine.html , database cross reference=BTO:0000291 }
  • + corpus allatum taxon notes In Lepidoptera species, the corpus allatum acts as a release site for prothoracicotropic hormone which is generated by the brain
  • + corpus allatum taxon notes In many Diptera species, the corpus allatum is fused with the corpus cardiacum, forming Weismann’s ring

Changes for: eye surface region

• Deleted
  • - eye surface label eye surface
• Added
  • + eye surface region SubClassOf superficial to some surface of eyeball
  • + eye surface region has exact synonym eye surface { database cross reference=MA:0002486 }
  • + eye surface region has exact synonym ocular surface
  • + eye surface region label eye surface region

Changes for: spleen central arteriole

• Deleted
  • - spleen central arteriole SubClassOf abdomen blood vessel
  • - spleen central arteriole SubClassOf arteriole
  • - spleen central arteriole database cross reference http://www.snomedbrowser.com/Codes/Details/282511007
• Added
  • + spleen central arteriole SubClassOf splenic arteriole
  • + spleen central arteriole has broad synonym splenic arteriole

Changes for: brainstem white matter

• Added
  • + brainstem white matter has related synonym brain stem white matter { database cross reference=EMAPA:35189 }

Changes for: intersomitic vessel

• Added
  • + intersomitic vessel has exact synonym intersomitic blood vessel { database cross reference=XAO:0004075 }

Changes for: lumen of urethra

• Deleted
  • - lumen of urethra EquivalentTo anatomical space and enclosed by some urethra
  • - lumen of urethra SubClassOf enclosed by some urethra
• Added
  • + lumen of urethra EquivalentTo anatomical space and luminal space of some urethra
  • + lumen of urethra SubClassOf luminal space of some urethra

Changes for: proximal segment of rib

• Added
  • + proximal segment of rib has exact synonym proximal rib segment

Changes for: lumen of laryngopharynx

• Deleted
  • - lumen of laryngopharynx EquivalentTo anatomical space and enclosed by some hypopharynx
  • - lumen of laryngopharynx SubClassOf enclosed by some hypopharynx
• Added
  • + lumen of laryngopharynx EquivalentTo anatomical space and luminal space of some hypopharynx
  • + lumen of laryngopharynx SubClassOf luminal space of some hypopharynx

Changes for: pelvic cavity

• Deleted
  • - pelvic cavity EquivalentTo anatomical cavity and enclosed by some pelvis
  • - pelvic cavity SubClassOf enclosed by some pelvis
• Added
  • + pelvic cavity EquivalentTo anatomical cavity and luminal space of some pelvis
  • + pelvic cavity SubClassOf luminal space of some pelvis

Changes for: adenohypophysis

• Added
  • + adenohypophysis has related synonym pituitary anterior lobe { database cross reference=EMAPA:17514 }

Changes for: cranial cavity

• Deleted
  • - cranial cavity EquivalentTo anatomical cavity and enclosed by some skull
  • - cranial cavity SubClassOf enclosed by some skull
• Added
  • + cranial cavity EquivalentTo anatomical cavity and luminal space of some skull
  • + cranial cavity SubClassOf luminal space of some skull

Changes for: stylopod

• Deleted
  • - stylopod EquivalentTo limb segment and has skeleton some stylopodial skeleton
  • - stylopod SubClassOf has skeleton some stylopodial skeleton
• Added
  • + stylopod EquivalentTo limb segment and has skeleton some stylopodial skeleton
  • + stylopod SubClassOf has skeleton some stylopodial skeleton

Changes for: intercerebral commissure

• Deleted
  • - intercerebral commissure SubClassOf brain commissure
  • - intercerebral commissure SubClassOf structure with developmental contribution from neural crest
• Added
  • + intercerebral commissure SubClassOf commissure of telencephalon
  • + intercerebral commissure database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1559

Changes for: autopod region

• Deleted
  • - autopod region EquivalentTo limb segment and has skeleton some autopodial skeleton
  • - autopod region SubClassOf has skeleton some autopodial skeleton
• Added
  • + autopod region EquivalentTo limb segment and has skeleton some autopodial skeleton
  • + autopod region SubClassOf has skeleton some autopodial skeleton
  • + autopod region has related synonym distal segment of limb { database cross reference=EMAPA:32722 }

Changes for: zeugopod

• Deleted
  • - zeugopod EquivalentTo limb segment and has skeleton some zeugopodial skeleton
  • - zeugopod SubClassOf has skeleton some zeugopodial skeleton
• Added
  • + zeugopod EquivalentTo limb segment and has skeleton some zeugopodial skeleton
  • + zeugopod SubClassOf has skeleton some zeugopodial skeleton

Changes for: uterine artery

• Deleted
  • - uterine artery EquivalentTo artery and part of some uterus
  • - uterine artery SubClassOf artery
• Added
  • + uterine artery EquivalentTo artery and part of some uterus and supplies some female gonad and supplies some uterus and supplies some vagina
  • + uterine artery SubClassOf ovarian artery
  • + uterine artery SubClassOf supplies some female gonad
  • + uterine artery SubClassOf supplies some uterus
  • + uterine artery SubClassOf supplies some vagina

Changes for: nictitating membrane lamina

• Added
  • + nictitating membrane lamina comment Morphology notes: Generally, the cartilage consists of a long narrow appendix which is followed by a variable crossbar[PMID:11325064]
  • + nictitating membrane lamina has exact synonym nictitating membrane cartilage { database cross reference=http://www.ncbi.nlm.nih.gov/pubmed/11325064 }
  • + nictitating membrane lamina present in taxon http://purl.obolibrary.org/obo/NCBITaxon_40674

Changes for: glossopharyngeal-vagus IX-X preganglion complex

• Added
  • + glossopharyngeal-vagus IX-X preganglion complex has related synonym glossopharyngeal-vagus preganglion complex { database cross reference=EMAPA:16662 }

Changes for: white matter lamina of cerebellum

• Deleted
  • - lamina of cerebellum label lamina of cerebellum
• Added
  • + white matter lamina of cerebellum label white matter lamina of cerebellum

Changes for: parietal pleura

• Added
  • + parietal pleura SubClassOf parietal serous membrane

Changes for: visceral pleura

• Added
  • + visceral pleura SubClassOf parietal serous membrane

Changes for: white matter lamina of cerebral hemisphere

• Deleted
  • - lamina of cerebral hemisphere definition A lamina of neuraxis that is part of a cerebral hemisphere. { database cross reference=OBOL:automatic }
  • - lamina of cerebral hemisphere has exact synonym cerebral hemisphere lamina { database cross reference=FMA:67951 }
  • - lamina of cerebral hemisphere label lamina of cerebral hemisphere
• Added
  • + white matter lamina of cerebral hemisphere has broad synonym cerebral hemisphere lamina { database cross reference=FMA:67951 }
  • + white matter lamina of cerebral hemisphere has broad synonym lamina of cerebral hemisphere { database cross reference=FMA:67951 }
  • + white matter lamina of cerebral hemisphere label white matter lamina of cerebral hemisphere

Changes for: white matter lamina of neuraxis

• Deleted
  • - lamina of neuraxis has exact synonym neuraxis lamina { database cross reference=FMA:83856 }
  • - lamina of neuraxis label lamina of neuraxis
• Added
  • + white matter lamina of neuraxis EquivalentTo nervous system cell part layer and part of some white matter
  • + white matter lamina of neuraxis SubClassOf nervous system cell part layer
  • + white matter lamina of neuraxis has broad synonym lamina of neuraxis { database cross reference=FMA:83856 }
  • + white matter lamina of neuraxis has broad synonym neuraxis lamina { database cross reference=FMA:83856 }
  • + white matter lamina of neuraxis label white matter lamina of neuraxis

Changes for: white matter lamina of diencephalon

• Deleted
  • - lamina of diencephalon definition A lamina of neuraxis that is part of a diencephalon. { database cross reference=OBOL:automatic }
  • - lamina of diencephalon has exact synonym diencephalon lamina { database cross reference=FMA:62449 }
  • - lamina of diencephalon label lamina of diencephalon
• Added
  • + white matter lamina of diencephalon has broad synonym diencephalon lamina { database cross reference=FMA:62449 }
  • + white matter lamina of diencephalon has broad synonym lamina of diencephalon { database cross reference=FMA:62449 }
  • + white matter lamina of diencephalon label white matter lamina of diencephalon

Changes for: parietal serous pericardium

• Deleted
  • - parietal serous pericardium SubClassOf serous membrane
  • - parietal serous pericardium database cross reference EMAPA:16588
  • - parietal serous pericardium definition Parietal serous membrane which is continuous with the visceral serous pericardium and is attached to the central tendon of diaphragm.[FMA] { database cross reference=http://en.wikipedia.org/wiki/Parietal_pericardium , database cross reference=FMA:FMA }
  • - parietal serous pericardium has exact synonym parietal pericardium
• Added
  • + parietal serous pericardium EquivalentTo parietal serous membrane and part of some serous pericardium
  • + parietal serous pericardium SubClassOf parietal serous membrane
  • + parietal serous pericardium definition Parietal serous membrane which is part of the serous membrane. { database cross reference=UBERON:cjm }
  • + parietal serous pericardium has exact synonym parietal pericardium { database cross reference=VHOG:0000537 }

Changes for: pericardium

• Deleted
  • - pericardium definition The outer membrane/wall of the developing heart, surrounding the myocardium. { database cross reference=http://en.wikipedia.org/wiki/Pericardium }
  • - pericardium external ontology notes we follow FMA in dividing pericardial sac in pericardium and pericardial cavity { external ontology=FMA }
• Added
  • + pericardium definition The combination of pericardial sac (a double-walled sac containing the heart and the roots of the great vessels) plus fibrous pericardium. { database cross reference=http://en.wikipedia.org/wiki/Pericardium }
  • + pericardium external ontology notes we follow FMA in dividing pericardium into pericardial sac and fibrous pericardium { external ontology=FMA }

Changes for: pericardial sac

• Deleted
  • - pericardial sac definition Serous sac, which has as parts the serous pericardium and the pericardial cavity [FMA]. { database cross reference=FMA:9868 }
  • - pericardial sac external ontology notes we follow FMA in dividing pericardial sac in pericardium and pericardial cavity { external ontology=FMA }
• Added
  • + pericardial sac definition a double-walled sac containing the heart and the roots of the great vessels. { database cross reference=http://en.wikipedia.org/wiki/Pericardium }

Changes for: layer of hippocampal field

• Deleted
  • - layer of hippocampal field SubClassOf layer of hippocampus
• Added
  • + layer of hippocampal field SubClassOf ectoderm-derived structure
  • + layer of hippocampal field SubClassOf organ component layer
  • + layer of hippocampal field SubClassOf structure with developmental contribution from neural crest

Changes for: basal ganglion

• Added
  • + basal ganglion database cross reference DHBA:BN

Changes for: visceral serous pericardium

• Deleted
  • - visceral serous pericardium SubClassOf serous pericardium
  • - visceral serous pericardium has exact synonym visceral pericardium
• Added
  • + visceral serous pericardium EquivalentTo visceral serous membrane and part of some serous pericardium
  • + visceral serous pericardium SubClassOf part of some serous pericardium
  • + visceral serous pericardium SubClassOf visceral serous membrane
  • + visceral serous pericardium has exact synonym visceral pericardium { database cross reference=VHOG:0000538 }
  • + visceral serous pericardium has related synonym pericardium visceral mesothelium { database cross reference=EMAPA:16589 }

Changes for: striatum

• Added
  • + striatum database cross reference DMBA:Str

Changes for: lens fiber

• Added
  • + lens fiber has related synonym lens fibre { database cross reference=EMAPA:17841 }

Changes for: inferior cervical ganglion

• Added
  • + inferior cervical ganglion has related synonym cervico-thoracic { database cross reference=EMAPA:18439 }

Changes for: lenticular fasciculus

• Deleted
  • - lenticular fasciculus SubClassOf fasciculus of brain
• Added
  • + lenticular fasciculus SubClassOf ventral thalamic fasciculus

Changes for: endometrial gland

• Deleted
  • - uterine gland SubClassOf has part some ciliated columnar epithelium
  • - uterine gland SubClassOf part of some uterus
  • - uterine gland database cross reference FMA:71647
  • - uterine gland database cross reference FMA:86488
  • - uterine gland definition The mucous secreting gland associated with the epithelium lining the uterus. These glands develop and secrete each menstrual cycle and are thought to provide initial blastocyst nutrition prior to implantation[BTO] { database cross reference=http://en.wikipedia.org/wiki/Uterine_glands }
  • - uterine gland editor note TODO - check FMA
  • - uterine gland has exact synonym uterine glands
  • - uterine gland has exact synonym uterine glands set
  • - uterine gland has related synonym glandular part of endometrium { database cross reference=FMA:86488 }
  • - uterine gland has related synonym set of uterine glands { database cross reference=FMA:71647 }
  • - uterine gland label uterine gland
• Added
  • + endometrial gland EquivalentTo gland and part of some endometrium
  • + endometrial gland SubClassOf part of some endometrium glandular epithelium
  • + endometrial gland SubClassOf part of some endometrium
  • + endometrial gland SubClassOf pelvic region element
  • + endometrial gland comment Structure notes: simple or branched tubular
  • + endometrial gland definition The mucous secreting gland associated with the mucuous membrane lining the uterus. { database cross reference=http://en.wikipedia.org/wiki/Uterine_glands }
  • + endometrial gland fma set term http://purl.obolibrary.org/obo/FMA_71647
  • + endometrial gland has exact synonym uterine gland
  • + endometrial gland label endometrial gland

Changes for: decidua

• Added
  • + decidua has related synonym extraembryonic part of placenta { database cross reference=UBERON:cjm }
  • + decidua has related synonym extraembryonic placenta { database cross reference=UBERON:cjm }
  • + decidua has related synonym maternal part of placenta { database cross reference=UBERON:cjm }
  • + decidua has related synonym maternal placenta { database cross reference=EMAPA:35269 }
  • + decidua has related synonym maternal placenta { database cross reference=GOC:dph }

Changes for: internal thoracic artery

• Added
  • + internal thoracic artery has related synonym mammary artery { database cross reference=EMAPA:18617 }

Changes for: hamstring muscle

• Deleted
  • - hamstring muscle SubClassOf has muscle antagonist some rectus femoris
• Added
  • + hamstring muscle SubClassOf has muscle antagonist some rectus femoris

Changes for: mesocardium

• Added
  • + mesocardium has related synonym cardiac mesentery { database cross reference=EMAPA:16212 }

Changes for: glossopharyngeal-vagus IX-X ganglion complex

• Added
  • + glossopharyngeal-vagus IX-X ganglion complex has related synonym glossopharyngeal-vagus ganglion complex { database cross reference=EMAPA:16796 }

Changes for: lacrimal punctum

• Deleted
  • - lacrimal punctum SubClassOf part of some lacrimal apparatus
• Added
  • + lacrimal punctum SubClassOf part of some lacrimal drainage system
  • + lacrimal punctum function notes collect tears produced by the lacrimal glands
  • + lacrimal punctum has related synonym lacrimal point { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_punctum }
  • + lacrimal punctum has related synonym lacrimal puncta { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_punctum , has synonym type=plural term }
  • + lacrimal punctum has related synonym puncta lacrimalia { database cross reference=http://en.wikipedia.org/wiki/Lacrimal_punctum , has synonym type=latin term }

Changes for: muscle of abdomen

• Added
  • + muscle of abdomen has related synonym abdominal wall musculature { database cross reference=EMAPA:35103 }

Changes for: trapezius muscle

• Deleted
  • - trapezius muscle SubClassOf has muscle antagonist some latissimus dorsi muscle
  • - trapezius muscle SubClassOf has muscle antagonist some serratus ventralis
• Added
  • + trapezius muscle SubClassOf has muscle antagonist some latissimus dorsi muscle
  • + trapezius muscle SubClassOf has muscle antagonist some serratus ventralis

Changes for: forelimb zeugopod

• Deleted
  • - forelimb zeugopod SubClassOf has skeleton some forelimb zeugopod skeleton
• Added
  • + forelimb zeugopod SubClassOf has skeleton some forelimb zeugopod skeleton

Changes for: pes

• Deleted
  • - pes SubClassOf has skeleton some skeleton of pes
• Added
  • + pes SubClassOf has skeleton some skeleton of pes
  • + pes has narrow synonym hindpaw { database cross reference=MA:0000044 , has synonym type=taxonomic disambiguation }

Changes for: pancreas primordium

• Deleted
  • - pancreas primordium has related synonym pancreatic anlage
• Added
  • + pancreas primordium has related synonym pancreatic anlage { database cross reference=ZFA:0000254 }

Changes for: dorsal pancreatic bud

• Added
  • + dorsal pancreatic bud has exact synonym primary pancreatic bud { database cross reference=XAO:0000467 }

Changes for: fibrous pericardium

• Deleted
  • - fibrous pericardium definition Membrane organ which is attached to the pericardial sac proper and the central tendon of diaphragm and is continuous with the pretracheal fascia.[FMA] { database cross reference=http://en.wikipedia.org/wiki/Fibrous_pericardium , database cross reference=FMA:FMA }
  • - fibrous pericardium editor note This class was created automatically from a combination of ontologies
• Added
  • + fibrous pericardium SubClassOf composed primarily of some areolar connective tissue
  • + fibrous pericardium comment Structure notes: most superficial part of pericardium; continuous with the outer adventitial layer of the neighboring great blood vessels. [Wikipedia:Fibrous_pericardium]
  • + fibrous pericardium definition Membrane organ which is attached to the pericardial sac proper and the central tendon of diaphragm and is continuous with the pretracheal fascia.[FMA] { database cross reference=FMA:9586 }

Changes for: serous pericardium

• Deleted
  • - serous pericardium definition Serous membrane which has as its parts the epicardium and parietal serous pericardium that surrounds pericardial cavity. { database cross reference=http://en.wikipedia.org/wiki/Serous_pericardium }
  • - serous pericardium editor note This class was created automatically from a combination of ontologies
  • - serous pericardium has exact synonym serous portion of pericardium
• Added
  • + serous pericardium SubClassOf attaches to some fibrous pericardium
  • + serous pericardium SubClassOf has part some parietal serous pericardium
  • + serous pericardium definition Serous membrane which is divided into parietal and visceral pericardium. { database cross reference=http://en.wikipedia.org/wiki/Serous_pericardium , database cross reference=UBERON:cjm }
  • + serous pericardium has exact synonym serous portion of pericardium { database cross reference=FMA:9582 }

Changes for: atrioventricular node

• Added
  • + atrioventricular node has related synonym A-V node { database cross reference=EMAPA:35153 }
  • + atrioventricular node has related synonym atrio-ventricular node { database cross reference=EMAPA:35153 }

Changes for: atrioventricular bundle

• Added
  • + atrioventricular bundle has related synonym A-V bundle { database cross reference=EMAPA:35152 }
  • + atrioventricular bundle has related synonym atrio-ventricular bundle { database cross reference=EMAPA:35152 }

Changes for: stomach lumen

• Deleted
  • - stomach lumen EquivalentTo anatomical space and enclosed by some stomach
  • - stomach lumen SubClassOf enclosed by some stomach
• Added
  • + stomach lumen EquivalentTo anatomical space and luminal space of some stomach
  • + stomach lumen SubClassOf luminal space of some stomach

Changes for: bulbo-urethral gland

• Added
  • + bulbo-urethral gland has related synonym Cowper’s gland of male { database cross reference=EMAPA:19286 }

Changes for: nictitating membrane

• Deleted
  • - nictitating membrane taxon notes Some reptiles, birds, and sharks have full nictitating membranes; in many mammals, a small, vestigial portion of the membrane remains in the corner of the eye. Some mammals, such as camels, polar bears, seals, and aardvarks, have full nictitating membranes { source=WP }
• Added
  • + nictitating membrane has exact synonym membrana nictitans { database cross reference=http://en.wikipedia.org/wiki/Nictitating_membrane , has synonym type=latin term }
  • + nictitating membrane has related synonym haw { database cross reference=http://en.wikipedia.org/wiki/Nictitating_membrane }
  • + nictitating membrane taxon notes in mice, the nictitating membrane is very small and composed of a very thin core of cartilage covered by loose connective tissue
  • + nictitating membrane taxon notes Some reptiles, birds, and sharks have full nictitating membranes; in many mammals, a small, vestigial portion of the membrane remains in the corner of the eye. Some mammals, such as camels, polar bears, seals, and aardvarks, have full nictitating membranes. fully developed nictitating membranes can be found in lemurs and lorisoid primates. { source=WP }

Changes for: manus

• Deleted
  • - manus SubClassOf has skeleton some skeleton of manus
• Added
  • + manus SubClassOf has skeleton some skeleton of manus
  • + manus has narrow synonym forepaw { database cross reference=MA:0000037 , has synonym type=taxonomic disambiguation }

Changes for: nasolacrimal duct

• Deleted
  • - nasolacrimal duct editor note TODO - resolve canaliculus vs tear duct vs lacrimal vs nasolacrimal
• Added
  • + nasolacrimal duct SubClassOf channel for some secretion of lacrimal gland
  • + nasolacrimal duct SubClassOf connects some lacrimal sac
  • + nasolacrimal duct SubClassOf connects some nasal cavity
  • + nasolacrimal duct has related synonym tear duct { database cross reference=http://en.wikipedia.org/wiki/Nasolacrimal_duct }

Changes for: pharyngotympanic tube

• Added
  • + pharyngotympanic tube has exact synonym pharyngo-tympanic tube { database cross reference=MA:0000255 }

Changes for: Brodmann (1909) area 43

• Added
  • + Brodmann (1909) area 43 has exact synonym area 43 of brodmann { database cross reference=FMA:68640 }

Changes for: temporal sulcus

• Added
  • + temporal sulcus database cross reference HBA:TLs
  • + temporal sulcus has exact synonym temporal lobe sulci { database cross reference=HBA:TLs , has synonym type=plural term }
  • + temporal sulcus has exact synonym temporal lobe sulcus

Changes for: astragalus-calcaneum unit

• Deleted
  • - astragalus-calcaneum unit SubClassOf anatomical cluster
• Added
  • + astragalus-calcaneum unit SubClassOf subdivision of skeletal system

Changes for: layer of neocortex

• Deleted
  • - layer of neocortex SubClassOf central nervous system gray matter layer
• Added
  • + layer of neocortex SubClassOf ectoderm-derived structure
  • + layer of neocortex SubClassOf organ component layer

Changes for: layer of hippocampus

• Added
  • + layer of hippocampus SubClassOf central nervous system cell part cluster

Changes for: layer of dentate gyrus

• Added
  • + layer of dentate gyrus SubClassOf central nervous system cell part cluster

Changes for: endometrial stroma

• Deleted
  • - endometrial stroma editor note This class was created automatically from a combination of ontologies
• Added
  • + endometrial stroma EquivalentTo stroma and part of some endometrium

Changes for: lamina propria of bronchus

• Added
  • + lamina propria of bronchus has related synonym bronchial lamina propria { database cross reference=EMAPA:35194 }

Changes for: neural crest

• Added
  • + neural crest has exact synonym NC { database cross reference=XAO:0000048 , has synonym type=abbreviation }

Changes for: frontal sulcus

• Added
  • + frontal sulcus database cross reference HBA:FLs
  • + frontal sulcus has exact synonym frontal lobe sulci { database cross reference=HBA:FLs , has synonym type=plural term }
  • + frontal sulcus has exact synonym frontal lobe sulcus

Changes for: epicardium

• Deleted
  • - epicardium SubClassOf mesoderm-derived structure
  • - epicardium SubClassOf organ part
  • - epicardium definition External layer of the heart[ZFA]. { database cross reference=ZFIN:curator }
• Added
  • + epicardium SubClassOf attaches to some myocardium
  • + epicardium SubClassOf heart layer
  • + epicardium SubClassOf serous membrane
  • + epicardium comment Function notes: The visceral pericardium apparently produces the pericardial fluid, which lubricates motion between the inner and outer layers of the pericardium. During ventricular contraction, the wave of depolarization moves from endocardial to epicardial surface. [Wikipedia:Epicardium]
  • + epicardium definition a serous membrane that forms the innermost layer of the pericardium and the outer surface of the heart.
  • + epicardium has related synonym pericardium visceral mesothelium { database cross reference=EMAPA:16589 }

Changes for: hippocampus fimbria

• Added
  • + hippocampus fimbria database cross reference HBA:fi

Changes for: white matter of cerebellum

• Added
  • + white matter of cerebellum database cross reference HBA:CbWM

Changes for: accessory nerve root

• Deleted
  • - accessory nerve root EquivalentTo nerve root and part of some accessory XI nerve
  • - accessory nerve root SubClassOf nerve root
  • - accessory nerve root SubClassOf part of some accessory XI nerve
• Added
  • + accessory nerve root EquivalentTo nerve root and continuous with some accessory XI nerve
  • + accessory nerve root SubClassOf continuous with some accessory XI nerve
  • + accessory nerve root SubClassOf root of cranial nerve

Changes for: pleuroperitoneal canal lumen

• Deleted
  • - pleuroperitoneal canal lumen EquivalentTo anatomical space and enclosed by some pleuroperitoneal canal
  • - pleuroperitoneal canal lumen SubClassOf enclosed by some pleuroperitoneal canal
• Added
  • + pleuroperitoneal canal lumen EquivalentTo anatomical space and luminal space of some pleuroperitoneal canal
  • + pleuroperitoneal canal lumen SubClassOf luminal space of some pleuroperitoneal canal

Changes for: median lingual swelling epithelium

• Added
  • + median lingual swelling epithelium has related synonym tuberculum impar epitheilium { database cross reference=EMAPA:17188 }

Changes for: mesenchyme of submandibular gland primordium

• Added
  • + mesenchyme of submandibular gland primordium has related synonym submaxillary gland primordium mesenchyme { database cross reference=EMAPA:17757 }

Changes for: associated mesenchyme of main bronchus

• Added
  • + associated mesenchyme of main bronchus has related synonym primary bronchus mesenchyme { database cross reference=EMAPA:16850 }
  • + associated mesenchyme of main bronchus has related synonym principal bronchus mesenchyme { database cross reference=EMAPA:16850 }

Changes for: lumen of central canal of spinal cord

• Deleted
  • - lumen of central canal of spinal cord EquivalentTo anatomical space and enclosed by some central canal of spinal cord
  • - lumen of central canal of spinal cord SubClassOf enclosed by some central canal of spinal cord
• Added
  • + lumen of central canal of spinal cord EquivalentTo anatomical space and luminal space of some central canal of spinal cord
  • + lumen of central canal of spinal cord SubClassOf luminal space of some central canal of spinal cord

Changes for: sesamoid cartilage

• Added
  • + sesamoid cartilage has exact synonym cartilago sesamoidea { database cross reference=FMA:55379 }
  • + sesamoid cartilage has exact synonym sesamoid cartilage of cricopharyngeal ligament { database cross reference=FMA:55379 }

Changes for: lumen of lymphatic vessel

• Deleted
  • - lumen of lymphatic vessel EquivalentTo anatomical space and enclosed by some lymphatic vessel
  • - lumen of lymphatic vessel SubClassOf enclosed by some lymphatic vessel
• Added
  • + lumen of lymphatic vessel EquivalentTo anatomical space and luminal space of some lymphatic vessel
  • + lumen of lymphatic vessel SubClassOf luminal space of some lymphatic vessel

Changes for: lumen of blood vessel

• Deleted
  • - lumen of blood vessel EquivalentTo anatomical space and enclosed by some blood vessel
  • - lumen of blood vessel SubClassOf enclosed by some blood vessel
• Added
  • + lumen of blood vessel EquivalentTo anatomical space and luminal space of some blood vessel
  • + lumen of blood vessel SubClassOf luminal space of some blood vessel

Changes for: fasciculus aberans

• Deleted
  • - fasciculus aberans SubClassOf fasciculus of brain
• Added
  • + fasciculus aberans SubClassOf cerebral nerve fasciculus

Changes for: paraurethral gland

• Added
  • + paraurethral gland has related synonym Skene’s gland of clitoral urethra { database cross reference=EMAPA:36133 }

Changes for: psoas muscle

• Deleted
  • - psoas muscle SubClassOf has muscle antagonist some gluteus maximus
• Added
  • + psoas muscle SubClassOf has muscle antagonist some gluteus maximus

Changes for: abductor pollicis brevis muscle

• Deleted
  • - abductor pollicis brevis muscle SubClassOf has muscle antagonist some adductor pollicis muscle
• Added
  • + abductor pollicis brevis muscle SubClassOf has muscle antagonist some adductor pollicis muscle

Changes for: mammary ridge

• Deleted
  • - mammary ridge definition A bandlike thickening of ectoderm in the embryo extending from just below the axilla to the inguinal region and giving rise to the mammary glands. { database cross reference=http://dictionary.reference.com/browse/mammary%20ridge }
• Added
  • + mammary ridge definition A ridge of epidermal cells that will form the mammary placodes. { database cross reference=GOC:dph }
  • + mammary ridge has exact synonym mammary gland ridge { database cross reference=EMAPA:18541 }
  • + mammary ridge has related synonym mammary line { database cross reference=http://en.wikipedia.org/wiki/Milk_line }

Changes for: flexor pollicis longus muscle

• Deleted
  • - flexor pollicis longus muscle SubClassOf has muscle antagonist some extensor pollicis longus muscle
• Added
  • + flexor pollicis longus muscle SubClassOf has muscle antagonist some extensor pollicis longus muscle

Changes for: diencephalic part of interventricular foramen

• Added
  • + diencephalic part of interventricular foramen has related synonym ependymal foramen { database cross reference=EMAPA:16901 }

Changes for: carpus cartilage element

• Added
  • + carpus cartilage element has related synonym carpal cartilage condensation { database cross reference=EMAPA:18102 }

Changes for: rhombic lip

• Added
  • + rhombic lip has related synonym cerebellar primordium { database cross reference=EMAPA:17074 }

Changes for: carpus pre-cartilage condensation

• Added
  • + carpus pre-cartilage condensation has related synonym carpal pre-cartilage condensation { database cross reference=EMAPA:17724 }

Changes for: cervical sinus of His

• Added
  • + cervical sinus of His has related synonym retro-hyoid depression { database cross reference=EMAPA:16884 }

Changes for: glossopharyngeal IX preganglion

• Added
  • + glossopharyngeal IX preganglion has related synonym glossopharyngeal preganglion { database cross reference=EMAPA:16661 }

Changes for: humerus cartilage element

• Added
  • + humerus cartilage element has related synonym humeral cartilage condensation { database cross reference=EMAPA:17713 }

Changes for: humerus pre-cartilage condensation

• Added
  • + humerus pre-cartilage condensation has related synonym humeral pre-cartilage condensation { database cross reference=EMAPA:17427 }

Changes for: facio-acoustic VII-VIII preganglion complex

• Added
  • + facio-acoustic VII-VIII preganglion complex has related synonym facio-acoustic preganglion complex { database cross reference=EMAPA:16660 }

Changes for: femur pre-cartilage condensation

• Added
  • + femur pre-cartilage condensation has related synonym femoral pre-cartilage condensation { database cross reference=EMAPA:17502 }

Changes for: male genital tubercle

• Added
  • + male genital tubercle has related synonym penis anlage { database cross reference=EMAPA:17969 }

Changes for: nasolacrimal groove

• Deleted
  • - nasolacrimal groove SubClassOf ecto-epithelium
  • - nasolacrimal groove SubClassOf respiratory system epithelium
• Added
  • + nasolacrimal groove SubClassOf nose epithelium

Changes for: infundibular recess of 3rd ventricle

• Deleted
  • - infundibular recess of 3rd ventricle definition The floor of the third ventricle is prolonged downward as a funnel-shaped recess, the infundibular recess, into the infundibulum, and to the apex of the latter the hypophysis or pititary is attached { database cross reference=http://en.wikipedia.org/wiki/Infundibular_recess }
  • - infundibular recess of 3rd ventricle has related synonym Third ventricle infundibular recess { database cross reference=BAMS:V3ir }
• Added
  • + infundibular recess of 3rd ventricle definition A funnel-shaped diverticulum that extends downward from the anterior aspect of the floor of the third ventricle into the infundibulum of the hypophysis; the embryonic structure gives rise the neural component of the pituitary (pas nervosa). { database cross reference=MGI:anna }
  • + infundibular recess of 3rd ventricle has related synonym third ventricle infundibular recess { database cross reference=BAMS:V3ir }

Changes for: ischial cartilage element

• Added
  • + ischial cartilage element has related synonym ischial cartilage condensation { database cross reference=EMAPA:26930 }

Changes for: lens pit

• Added
  • + lens pit SubClassOf surface of eyeball

Changes for: pubic pre-cartilage condensation

• Deleted
  • - pubic pre-cartilage condensation database cross reference EMAPA:26928

Changes for: granulosa cell layer

• Deleted
  • - ovary stratum granulosum SubClassOf membranous layer
  • - ovary stratum granulosum SubClassOf reproductive structure
  • - ovary stratum granulosum label ovary stratum granulosum
• Added
  • + granulosa cell layer SubClassOf cell layer
  • + granulosa cell layer SubClassOf epithelium of female gonad
  • + granulosa cell layer comment Structure notes: At one part of the mature follicle the cells of the membrana granulosa are collected into a mass which projects into the cavity of the follicle. This is termed the discus proligerus. [Wikipedia:Membrana_granulosa, http://en.wikipedia.org/wiki/Membrana_granulosa]
  • + granulosa cell layer database cross reference http://en.wikipedia.org/wiki/Membrana_granulosa
  • + granulosa cell layer definition A layer of the ovarian follicle that consists of granulosa cells. { database cross reference=UBERON:cjm }
  • + granulosa cell layer has broad synonym membrana granulosa
  • + granulosa cell layer has exact synonym ovary stratum granulosum { database cross reference=MA:0001460 }
  • + granulosa cell layer label granulosa cell layer

Changes for: multi cell part structure

• Deleted
  • - multi cell component structure label multi cell component structure
• Added
  • + multi cell part structure label multi cell part structure

Changes for: submandibular gland primordium

• Added
  • + submandibular gland primordium has related synonym submaxillary gland primordium { database cross reference=EMAPA:17755 }

Changes for: metanephric cap

• Added
  • + metanephric cap has related synonym condensed mesenchyme { database cross reference=EMAPA:27621 }

Changes for: lateral entorhinal cortex

• Added
  • + lateral entorhinal cortex SubClassOf part of some insula

Changes for: 4 cell stage

• Added
  • + 4 cell stage has exact synonym 4-cell stage { database cross reference=XAO:1000013 }

Changes for: 2 cell stage

• Added
  • + 2 cell stage has exact synonym 2-cell stage { database cross reference=XAO:1000011 }

Changes for: 8 cell stage

• Added
  • + 8 cell stage has exact synonym 8-cell stage { database cross reference=XAO:1000014 }

Changes for: ventrolateral sulcus of medulla oblongata

• Deleted
  • - ventrolateral sulcus of medulla oblongata definition A longitudinal sulcus on the anterior surface of the medulla oblongata, lateral to the pyramid, from which emerge the fibers of the hypoglossal nerve. { database cross reference=Dorlands_Medical_Dictionary:MerckSource }
• Added
  • + ventrolateral sulcus of medulla oblongata definition A longitudinal sulcus on the anterior surface of the medulla oblongata, lateral to the pyramid, from which emerge the fibers of the hypoglossal nerve. { database cross reference=BTO:0002777 }

Changes for: tarsal gland acinus

• Deleted
  • - tarsal gland acinus definition . { database cross reference=MP:0009935 }
• Added
  • + tarsal gland acinus definition A sac-like structure comprising a sebaceous gland. { database cross reference=MP:0009935 }

Changes for: olfactory bulb layer

• Deleted
  • - olfactory bulb layer SubClassOf cell layer
  • - olfactory bulb layer SubClassOf ectoderm-derived structure
• Added
  • + olfactory bulb layer EquivalentTo nervous system cell part layer and part of some olfactory bulb
  • + olfactory bulb layer SubClassOf central nervous system cell part cluster
  • + olfactory bulb layer SubClassOf nervous system cell part layer

Changes for: dorsal accessory inferior olivary nucleus

• Added
  • + dorsal accessory inferior olivary nucleus database cross reference HBA:DIO

Changes for: cochlear canal

• Added
  • + cochlear canal database cross reference EMAPA:35801
  • + cochlear canal database cross reference MA:0003176
  • + cochlear canal has related synonym spiral vessel { database cross reference=MA:0003176 }

Changes for: joint space of elbow

• Deleted
  • - joint space of elbow EquivalentTo anatomical space and enclosed by some elbow joint
  • - joint space of elbow SubClassOf enclosed by some elbow joint
• Added
  • + joint space of elbow EquivalentTo anatomical space and luminal space of some elbow joint
  • + joint space of elbow SubClassOf luminal space of some elbow joint

Changes for: muscle structure

• Added
  • + muscle structure has exact synonym musculus { database cross reference=FMA:30316 }

Changes for: superior colliculus superficial gray layer

• Deleted
  • - superior colliculus superficial gray layer SubClassOf superficial layer of superior colliculus

Changes for: dorsal nerve cord

• Added
  • + dorsal nerve cord EquivalentTo nerve cord and intersects midsagittal plane of some dorsum
  • + dorsal nerve cord SubClassOf intersects midsagittal plane of some dorsum

Changes for: hemolymphoid system gland

• Added
  • + hemolymphoid system gland has related synonym haemolymphoid system gland { database cross reference=EMAPA:18766 }

Changes for: rectal diverticulum

• Added
  • + rectal diverticulum has related synonym rectal diverticula { database cross reference=XAO:0001015 , has synonym type=plural term }

Changes for: cerebellum vermis lobule III

• Added
  • + cerebellum vermis lobule III database cross reference DHBA:CbIII
  • + cerebellum vermis lobule III database cross reference HBA:Cb-III

Changes for: cerebellum vermis lobule IV

• Added
  • + cerebellum vermis lobule IV database cross reference DHBA:CbIV
  • + cerebellum vermis lobule IV database cross reference HBA:Cb-IV

Changes for: cerebellum vermis lobule IX

• Added
  • + cerebellum vermis lobule IX database cross reference DHBA:CbIX
  • + cerebellum vermis lobule IX database cross reference HBA:Cb-IX

Changes for: cerebellum vermis lobule V

• Added
  • + cerebellum vermis lobule V database cross reference DHBA:CbV
  • + cerebellum vermis lobule V database cross reference HBA:Cb-V
  • + cerebellum vermis lobule V has exact synonym lobule V (culmen and quadrangular lobule, posterior part) { database cross reference=DHBA:CbV }

Changes for: cerebellum vermis lobule VI

• Added
  • + cerebellum vermis lobule VI database cross reference DHBA:CbVI
  • + cerebellum vermis lobule VI database cross reference HBA:Cb-VI
  • + cerebellum vermis lobule VI has exact synonym lobule VI (declive and simplex lobule) { database cross reference=DHBA:CbVI }

Changes for: accessory olfactory bulb

• Deleted
  • - accessory olfactory bulb comment Site of termination of vomeronasal nerve; projects to: other parts of pallial amygdala, medial amygdala, subpallial nucleus (Butler and Hodos)
• Added
  • + accessory olfactory bulb comment Projection notes: Site of termination of vomeronasal nerve; projects to: other parts of pallial amygdala, medial amygdala, subpallial nucleus (Butler and Hodos)
  • + accessory olfactory bulb database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_53
  • + accessory olfactory bulb external ontology notes NIF_GrossAnatomy:nlx_anat_20090453 appears to be retired { external ontology=NIF }

Changes for: tympanic cavity

• Deleted
  • - tympanic cavity EquivalentTo anatomical cavity and enclosed by some middle ear
  • - tympanic cavity SubClassOf enclosed by some middle ear
• Added
  • + tympanic cavity EquivalentTo anatomical cavity and luminal space of some middle ear
  • + tympanic cavity SubClassOf luminal space of some middle ear

Changes for: anatomical conduit

• Deleted
  • - anatomical conduit SubClassOf encloses some anatomical conduit space
• Added
  • + anatomical conduit SubClassOf ObjectMinCardinality( connects anatomical space ) and ObjectMaxCardinality( connects anatomical space )
  • + anatomical conduit SubClassOf has part some anatomical conduit space

Changes for: optic vesicle

• Added
  • + optic vesicle has related synonym eye vesicle { database cross reference=XAO:0000228 }

Changes for: chorionic villus

• Added
  • + chorionic villus has related synonym embryonic part of placenta { database cross reference=UBERON:cjm }
  • + chorionic villus has related synonym embryonic placenta { database cross reference=UBERON:cjm }
  • + chorionic villus has related synonym fetal part of placenta { database cross reference=UBERON:cjm }
  • + chorionic villus has related synonym fetal placenta { database cross reference=UBERON:cjm }
  • + chorionic villus has related synonym villous chorion

Changes for: lumen of hindgut

• Deleted
  • - lumen of hindgut EquivalentTo anatomical space and enclosed by some hindgut
  • - lumen of hindgut SubClassOf enclosed by some hindgut
• Added
  • + lumen of hindgut EquivalentTo anatomical space and luminal space of some hindgut
  • + lumen of hindgut SubClassOf luminal space of some hindgut

Changes for: lumen of midgut

• Deleted
  • - lumen of midgut EquivalentTo anatomical space and enclosed by some midgut
  • - lumen of midgut SubClassOf enclosed by some midgut
• Added
  • + lumen of midgut EquivalentTo anatomical space and luminal space of some midgut
  • + lumen of midgut SubClassOf luminal space of some midgut

Changes for: lumen of colon

• Deleted
  • - lumen of colon EquivalentTo anatomical space and enclosed by some colon
  • - lumen of colon SubClassOf enclosed by some colon
• Added
  • + lumen of colon EquivalentTo anatomical space and luminal space of some colon
  • + lumen of colon SubClassOf luminal space of some colon

Changes for: lumen of anal canal

• Deleted
  • - lumen of anal canal EquivalentTo anatomical space and enclosed by some anal canal
  • - lumen of anal canal SubClassOf enclosed by some anal canal
• Added
  • + lumen of anal canal EquivalentTo anatomical space and luminal space of some anal canal
  • + lumen of anal canal SubClassOf luminal space of some anal canal

Changes for: short head of biceps brachii

• Added
  • + short head of biceps brachii has related synonym caput breve of biceps bracii { database cross reference=EMAPA:25055 }

Changes for: long head of biceps brachii

• Added
  • + long head of biceps brachii has related synonym capus longum of biceps brachii { database cross reference=EMAPA:25054 }

Changes for: pericardial visceral mesothelium

• Added
  • + pericardial visceral mesothelium SubClassOf mesothelium of pericardial cavity
  • + pericardial visceral mesothelium has related synonym pericardium visceral mesothelium { database cross reference=EMAPA:16589 }

Changes for: pericardial parietal mesothelium

• Added
  • + pericardial parietal mesothelium SubClassOf mesothelium of pericardial cavity
  • + pericardial parietal mesothelium comment AO notes: EMAPA:16588 belongs here on the basis of exact synonym
  • + pericardial parietal mesothelium has exact synonym pericardium parietal mesothelium { database cross reference=EMAPA:16588 }

Changes for: mesothelium of serous pericardium

• Deleted
  • - mesothelium of serous pericardium SubClassOf mesothelium
• Added
  • + mesothelium of serous pericardium SubClassOf mesothelium of pericardial cavity

Changes for: chordo neural hinge

• Added
  • + chordo neural hinge has exact synonym CNH { database cross reference=XAO:0000108 , has synonym type=abbreviation }

Changes for: hadjikhani et al. (1998) visuotopic area V2d

• Deleted
  • - hadjikhani et al. (1998) visuotopic area v2d label hadjikhani et al. (1998) visuotopic area v2d
• Added
  • + hadjikhani et al. (1998) visuotopic area V2d label hadjikhani et al. (1998) visuotopic area V2d

Changes for: Brodmann (1909) area 18

• Deleted
  • - Brodmann (1909) area 18 function notes interpretation of images[WP]

Changes for: dorsal pes interosseous muscle

• Deleted
  • - dorsal pes interosseous muscle SubClassOf has muscle antagonist some plantar foot interosseous muscle
• Added
  • + dorsal pes interosseous muscle SubClassOf has muscle antagonist some plantar foot interosseous muscle

Changes for: annulus fibrosus

• Added
  • + annulus fibrosus has broad synonym anulus { database cross reference=BTO:0003627 }

Changes for: olfactory bulb mitral cell layer

• Added
  • + olfactory bulb mitral cell layer database cross reference DMBA:OB-Mtr
  • + olfactory bulb mitral cell layer has exact synonym OB mitral cell layer { database cross reference=DMBA:OB }

Changes for: Harderian gland

• Deleted
  • - Harderian gland SubClassOf intersects midsagittal plane of some ocular region
  • - Harderian gland SubClassOf lacrimal gland
  • - Harderian gland definition The Harderian gland is an anterior orbital structure usually associated with the nictitating membrane, and produces and secretes a variety of substances to the eye, depending upon the species[GO]. { database cross reference=http://en.wikipedia.org/wiki/Harderian_gland , database cross reference=GO:0070384 }
• Added
  • + Harderian gland EquivalentTo medial gland of ocular region and produces some secretion of Harderian gland
  • + Harderian gland SubClassOf ectoderm-derived structure
  • + Harderian gland SubClassOf exocrine gland
  • + Harderian gland SubClassOf eye gland
  • + Harderian gland SubClassOf medial gland of ocular region
  • + Harderian gland SubClassOf part of some exocrine system
  • + Harderian gland SubClassOf produces some secretion of Harderian gland
  • + Harderian gland definition The Harderian gland is an anterior orbital gland usually associated with the nictitating membrane, and produces and secretes a variety of substances to the eye, depending upon the species[GO]. { database cross reference=http://en.wikipedia.org/wiki/Harderian_gland , database cross reference=GO:0070384 }
  • + Harderian gland function notes In mammals, the gland excretes an oily substance used to preen the fur[WP]
  • + Harderian gland function notes In some animals it acts as an accessory to the lacrimal gland, secreting fluid that eases movement of the nictitating membrane[WP]
  • + Harderian gland present in taxon http://purl.obolibrary.org/obo/NCBITaxon_10047 { source=ISBN:1118473523 }
  • + Harderian gland taxon notes In mouse the HG appears in the posterior part of eye region, in the form of nonluminated tubules between the sixteenth and eighteenth days of gestation. At birth it is still not differentiated histologically. In birds the HG originates from the conjunctival epithelium at a late embryonic stage. In the English sparrow, Passer domesticus (incubation period of about 13 days), it appears between the seventh and the eighth days of incubation. In the chick embryo (incubation period of about 21 days) it originates between the eleventh and the twelfth days.[PMID:9156609]
  • + Harderian gland taxon notes In the limbless, burrowing amphibian Apoda (Caecilians) the harderian gland is very large, filling much of the orbit and lubricating a retractile sensory tentacle rather than the eye (Walls, 1942; Wolff, 1948).

Changes for: labyrinthine layer blood vessel

• Deleted
  • - labyrinthine layer blood vessel SubClassOf blood vessel
  • - labyrinthine layer blood vessel SubClassOf extraembryonic structure
  • - labyrinthine layer blood vessel SubClassOf mixed endoderm/mesoderm-derived structure
  • - labyrinthine layer blood vessel SubClassOf reproductive structure
• Added
  • + labyrinthine layer blood vessel SubClassOf placenta blood vessel

Changes for: primary heart field

• Added
  • + primary heart field SubClassOf anlage
  • + primary heart field has related synonym FHF { database cross reference=XAO:0004185 , has synonym type=abbreviation }
  • + primary heart field has related synonym PHF { database cross reference=XAO:0004185 , has synonym type=abbreviation }

Changes for: cerebellar layer

• Added
  • + cerebellar layer SubClassOf central nervous system cell part cluster

Changes for: cardiogenic plate

• Added
  • + cardiogenic plate has related synonym cardiac crescent { database cross reference=EMAPA:16106 }

Changes for: orbitofrontal cortex

• Deleted
  • - orbitofrontal cortex SubClassOf regional part of cerebral cortex
• Added
  • + orbitofrontal cortex SubClassOf frontal gyrus

Changes for: pelvic adductor profundus

• Deleted
  • - pelvic adductor profundus SubClassOf adductor muscle
• Added
  • + pelvic adductor profundus SubClassOf adductor muscle of hip

Changes for: bronchus smooth muscle

• Added
  • + bronchus smooth muscle has related synonym bronchial smooth muscle { database cross reference=EMAPA:35195 }

Changes for: intestine smooth muscle

• Added
  • + intestine smooth muscle has related synonym intestinal muscularis { database cross reference=EMAPA:35441 }

Changes for: urinary bladder smooth muscle

• Added
  • + urinary bladder smooth muscle has related synonym smooth muscle layer of bladder

Changes for: cardiac septum

• Added
  • + cardiac septum has related synonym spiral septa { database cross reference=XAO:0004141 , has synonym type=plural term }

Changes for: lateral crico-arytenoid

• Deleted
  • - lateral crico-arytenoid SubClassOf has muscle antagonist some posterior crico-arytenoid
• Added
  • + lateral crico-arytenoid SubClassOf has muscle antagonist some posterior crico-arytenoid

Changes for: posterior crico-arytenoid

• Deleted
  • - posterior crico-arytenoid SubClassOf has muscle antagonist some lateral crico-arytenoid
• Added
  • + posterior crico-arytenoid SubClassOf has muscle antagonist some lateral crico-arytenoid

Changes for: viscus

• Added
  • + viscus has related synonym splanchnic tissue { database cross reference=BTO:0001491 }
  • + viscus has related synonym visceral tissue { database cross reference=BTO:0001491 }

Changes for: atrioventricular canal

• Added
  • + atrioventricular canal has related synonym ependymal canal { database cross reference=EMAPA:16546 }

Changes for: heart right ventricle

• Added
  • + heart right ventricle has related synonym right cardiac ventricle { database cross reference=EMAPA:17340 }

Changes for: vagal X nerve trunk

• Added
  • + vagal X nerve trunk has related synonym vagal nerve trunk { database cross reference=EMAPA:17272 }

Changes for: future trigeminal ganglion

• Added
  • + future trigeminal ganglion has related synonym trigeminal preganglion { database cross reference=EMAPA:16663 }

Changes for: gluteus minimus

• Added
  • + gluteus minimus has related synonym gluteus profundus { database cross reference=EMAPA:36230 }

Changes for: collection of hair on external ear

• Deleted
  • - collection of hair on ear label collection of hair on ear
• Added
  • + collection of hair on external ear SubClassOf composed primarily of some strand of hair on external ear
  • + collection of hair on external ear label collection of hair on external ear

Changes for: Zymbal’s gland

• Deleted
  • - Zymbal’s gland definition A multilobulated modified sebaceous gland that is located at the base of the external ear, under stratified squamous epithelium, and secretes into the auditory canal { database cross reference=http://ctrgenpath.net/static/atlas/mousehistology/Windows/senses/zymbalgland.html , database cross reference=ISBN10:0123813611 }
• Added
  • + Zymbal’s gland definition A multilobulated modified sebaceous gland that is located at the base of the external ear, lined by stratified squamous epithelium, and secretes into the auditory canal { database cross reference=http://ctrgenpath.net/static/atlas/mousehistology/Windows/senses/zymbalgland.html , database cross reference=ISBN10:0123813611 , database cross reference=MP:0013384 }
  • + Zymbal’s gland location notes located anterior and ventral to the exterior ear canal in rodents[MP:0013384]

Changes for: strand of vibrissa hair

• Deleted
  • - vibrissa hair database cross reference EMAPA:17529
  • - vibrissa hair has exact synonym vibrissa hair
  • - vibrissa hair label vibrissa hair
• Added
  • + strand of vibrissa hair EquivalentTo strand of hair and part of some vibrissa unit
  • + strand of vibrissa hair has exact synonym vibrissa hair { database cross reference=MA:0000782 }
  • + strand of vibrissa hair has related synonym tactile hair
  • + strand of vibrissa hair label strand of vibrissa hair

Changes for: ureteric bud tip

• Added
  • + ureteric bud tip has related synonym ampulla of ureter { database cross reference=EMAPA:27605 }

Changes for: superficial pelvic adductor

• Deleted
  • - superficial pelvic adductor SubClassOf adductor muscle
• Added
  • + superficial pelvic adductor SubClassOf adductor muscle of hip

Changes for: heel

• Deleted
  • - heel EquivalentTo segment of pes and has skeleton some calcaneus
  • - heel SubClassOf has skeleton some calcaneus
• Added
  • + heel EquivalentTo segment of pes and has skeleton some calcaneus
  • + heel SubClassOf has skeleton some calcaneus

Changes for: brainstem nucleus

• Added
  • + brainstem nucleus has related synonym brain stem nucleus { database cross reference=EMAPA:32790 }

Changes for: distal early tubule

• Added
  • + distal early tubule has exact synonym IT1 { database cross reference=XAO:0000287 , has synonym type=abbreviation }
  • + distal early tubule has exact synonym IT2 { database cross reference=XAO:0000287 , has synonym type=abbreviation }
  • + distal early tubule has related synonym early distal tubule of capillary loop nephron { database cross reference=EMAPA:27788 }
  • + distal early tubule has related synonym pronephric early distal tubule { database cross reference=XAO:0000287 }

Changes for: forebrain ventricular layer

• Deleted
  • - forebrain ventricular layer SubClassOf cell layer
  • - forebrain ventricular layer SubClassOf ectoderm-derived structure
• Added
  • + forebrain ventricular layer SubClassOf central nervous system cell part cluster
  • + forebrain ventricular layer SubClassOf nervous system cell part layer

Changes for: cerebellum

• Added
  • + cerebellum has exact synonym epencephalon-1 { database cross reference=FMA:67944 }

Changes for: stratum basale of epidermis

• Added
  • + stratum basale of epidermis has related synonym epidermis sensorial layer { database cross reference=XAO:0000041 }

Changes for: occipital lobe

• Deleted
  • - occipital lobe comment Editor note: consider splitting lobe and cortex
• Added
  • + occipital lobe database cross reference DHBA:Ocx
  • + occipital lobe editor note consider splitting lobe and cortex

Changes for: gray matter

• Deleted
  • - gray matter definition Heterogeneous cluster of neural somas in the brain and the spinal cord. { database cross reference=http://en.wikipedia.org/wiki/Gray_matter }
• Added
  • + gray matter definition Heterogeneous cluster of neural somas in the brain and the spinal cord. { database cross reference=http://en.wikipedia.org/wiki/Gray_matter , database cross reference=FMA:67242 }

Changes for: skin muscle

• Added
  • + skin muscle external ontology notes in MA, the only skin muscle is arrector pili. The only integumental muscle is panniculus carnosus. In EMAPA, the arrector pili only { external ontology=MA }

Changes for: trabecular network of bone

• Deleted
  • - trabecular network of bone database cross reference MP:0010867

Changes for: epithelium of mammary gland

• Added
  • + epithelium of mammary gland has exact synonym lactiferous gland epithelium { database cross reference=FMA:74445 }

Changes for: ectoplacental cavity

• Deleted
  • - ectoplacental cavity EquivalentTo anatomical space and enclosed by some ectoplacental cone
  • - ectoplacental cavity SubClassOf enclosed by some ectoplacental cone
• Added
  • + ectoplacental cavity EquivalentTo anatomical space and luminal space of some ectoplacental cone
  • + ectoplacental cavity SubClassOf luminal space of some ectoplacental cone

Changes for: amniotic mesoderm

• Added
  • + amniotic mesoderm has related synonym amnionic mesenchyme { database cross reference=EMAPA:16265 }
  • + amniotic mesoderm has related synonym amnionic mesoderm { database cross reference=EMAPA:16111 }

Changes for: neural lobe of neurohypophysis

• Added
  • + neural lobe of neurohypophysis SubClassOf develops from some infundibular recess of 3rd ventricle
  • + neural lobe of neurohypophysis has exact synonym pars nervosa of pituitary
  • + neural lobe of neurohypophysis has related synonym neural component of pituitary

Changes for: pharyngeal gill precursor

• Added
  • + pharyngeal gill precursor has related synonym external gill anlage { database cross reference=XAO:0000448 }

Changes for: fin

• Deleted
  • - fin SubClassOf has skeleton some fin skeleton
• Added
  • + fin SubClassOf has skeleton some fin skeleton

Changes for: extensor pollicis longus muscle

• Deleted
  • - extensor pollicis longus muscle SubClassOf has muscle antagonist some flexor pollicis brevis muscle
  • - extensor pollicis longus muscle SubClassOf has muscle antagonist some flexor pollicis longus muscle
• Added
  • + extensor pollicis longus muscle SubClassOf has muscle antagonist some flexor pollicis brevis muscle
  • + extensor pollicis longus muscle SubClassOf has muscle antagonist some flexor pollicis longus muscle

Changes for: ear epithelium

• Deleted
  • - ear epithelium SubClassOf epithelium
• Added
  • + ear epithelium SubClassOf sensory organ epithelium

Changes for: flexor digitorum superficialis

• Deleted
  • - flexor digitorum superficialis SubClassOf has muscle antagonist some extensor digitorum communis
• Added
  • + flexor digitorum superficialis SubClassOf has muscle antagonist some extensor digitorum communis

Changes for: supinator muscle

• Deleted
  • - supinator muscle SubClassOf has muscle antagonist some pronator teres
• Added
  • + supinator muscle SubClassOf has muscle antagonist some pronator teres

Changes for: medial preoptic region

• Added
  • + medial preoptic region database cross reference HBA:MPA

Changes for: apical ectodermal ridge

• Added
  • + apical ectodermal ridge has exact synonym apical epidermal ridge { database cross reference=XAO:0004121 }

Changes for: liver blood vessel

• Added
  • + liver blood vessel has related synonym hepatic blood vessel { database cross reference=EMAPA:35498 }

Changes for: obsolete subparabrachial nucleus

• Deleted
  • - subparabrachial nucleus SubClassOf nucleus of brain
  • - subparabrachial nucleus database cross reference DHBA:SPB
  • - subparabrachial nucleus database cross reference FMA:77220
  • - subparabrachial nucleus has exact synonym kolliker-Fuse nucleus { database cross reference=FMA:77220 }
  • - subparabrachial nucleus has exact synonym nucleus subparabrachialis { has synonym type=latin term }
  • - subparabrachial nucleus label subparabrachial nucleus
• Added
  • + obsolete subparabrachial nucleus deprecated true
  • + obsolete subparabrachial nucleus label obsolete subparabrachial nucleus
  • + obsolete subparabrachial nucleus term replaced by UBERON:0002869

Changes for: cranial or facial muscle

• Added
  • + cranial or facial muscle has related synonym cranial-facial muscle { database cross reference=EMAPA:25133 }
  • + cranial or facial muscle has related synonym cranio-facial muscle { database cross reference=EMAPA:25133 }
  • + cranial or facial muscle has related synonym craniofacial muscle { database cross reference=EMAPA:25133 }

Changes for: cell layer

• Deleted
  • - cell layer SubClassOf tissue
  • - cell layer database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_149357
  • - cell layer external definition Single layer of a laminar structure, identified by different density, arrangement or size of cells and processes arranged in flattened layers or lamina. (CUMBO) { source=NIF_GrossAnatomy:nlx_149357 }
  • - cell layer in subset cumbo
• Added
  • + cell layer SubClassOf lamina

Changes for: digit 6 plus metapodial segment

• Deleted
  • - digit 6 plus metapodial segment SubClassOf has skeleton some digit 6 digitopodial skeleton
• Added
  • + digit 6 plus metapodial segment SubClassOf has skeleton some digit 6 digitopodial skeleton

Changes for: digit 7 plus metapodial segment

• Deleted
  • - digit 7 plus metapodial segment SubClassOf has skeleton some digit 7 digitopodial skeleton
• Added
  • + digit 7 plus metapodial segment SubClassOf has skeleton some digit 7 digitopodial skeleton

Changes for: digit 8 plus metapodial segment

• Deleted
  • - digit 8 plus metapodial segment SubClassOf has skeleton some digit 8 digitopodial skeleton
• Added
  • + digit 8 plus metapodial segment SubClassOf has skeleton some digit 8 digitopodial skeleton

Changes for: lung connective tissue

• Added
  • + lung connective tissue has related synonym pulmonary connective tissue { database cross reference=EMAPA:35521 }
  • + lung connective tissue has related synonym pulmonary interstitial tissue

Changes for: skin scent gland

• Added
  • + skin scent gland SubClassOf exocrine gland of integumental system

Changes for: theca cell layer

• Deleted
  • - theca cell layer SubClassOf multi-tissue structure
  • - theca cell layer definition A layer of the ovarian follicles. They appear as the follicles become tertiary follicles. The theca folliculi are responsible for the production of testosterone from androstenedione in females, and indirectly the production of estrogens by supplying the neighboring granulosa cells with androstenedione that can then be used as a substrate for aromatase. { database cross reference=http://en.wikipedia.org/wiki/Theca_of_follicle }
• Added
  • + theca cell layer SubClassOf cell layer
  • + theca cell layer comment Function notes: The theca folliculi are responsible for the production of testosterone from androstenedione in females, and indirectly the production of estrogens by supplying the neighboring granulosa cells with androstenedione that can then be used as a substrate for aromatase. [Wikipedia:Theca_of_follicle]
  • + theca cell layer database cross reference EMAPA:35636
  • + theca cell layer database cross reference MA:0001712
  • + theca cell layer definition A layer of the ovarian follicle that consists of theca cells. { database cross reference=UBERON:cjm }
  • + theca cell layer has exact synonym ovary theca { database cross reference=MA:0001712 }
  • + theca cell layer has related synonym ovarian theca { database cross reference=EMAPA:35636 }

Changes for: pelvic fin

• Deleted
  • - pelvic fin SubClassOf has skeleton some pelvic fin skeleton
• Added
  • + pelvic fin SubClassOf has skeleton some pelvic fin skeleton

Changes for: pectoral fin

• Deleted
  • - pectoral fin SubClassOf has skeleton some pectoral fin skeleton
• Added
  • + pectoral fin SubClassOf has skeleton some pectoral fin skeleton

Changes for: oral cavity

• Deleted
  • - oral cavity EquivalentTo anatomical space and enclosed by some mouth
  • - oral cavity SubClassOf enclosed by some mouth
• Added
  • + oral cavity EquivalentTo anatomical space and luminal space of some mouth
  • + oral cavity SubClassOf luminal space of some mouth

Changes for: mouth

• Added
  • + mouth has related synonym trophic apparatus { database cross reference=UBERON:cjm }

Changes for: mesentery of heart

• Added
  • + mesentery of heart has related synonym cardiac mesentery { database cross reference=EMAPA:16212 }

Changes for: mesentery of oesophagus

• Deleted
  • - mesentery of oesophagus has exact synonym esophagus mesentery { database cross reference=OBOL:automatic }
  • - mesentery of oesophagus has exact synonym oesophagus mesentery { database cross reference=OBOL:automatic }
• Added
  • + mesentery of oesophagus has exact synonym esophagus mesentery { database cross reference=MA:0001569 }
  • + mesentery of oesophagus has exact synonym meso-esophagus
  • + mesentery of oesophagus has exact synonym oesophagus mesentery { database cross reference=VHOG:0000415 }

Changes for: roof plate of midbrain

• Added
  • + roof plate of midbrain has related synonym midbrain roof { database cross reference=EMAPA:16981 }

Changes for: gland of integumental system

• Deleted
  • - gland of integumental system has exact synonym integumental system gland { database cross reference=OBOL:automatic }
• Added
  • + gland of integumental system has exact synonym integumental gland { database cross reference=UBERON:cjm }
  • + gland of integumental system has exact synonym integumental system gland { database cross reference=UBERON:cjm }
  • + gland of integumental system has exact synonym integumentary gland { database cross reference=UBERON:cjm }

Changes for: digit 1 plus metapodial segment

• Deleted
  • - digit 1 plus metapodial segment SubClassOf has skeleton some digit 1 digitopodial skeleton
• Added
  • + digit 1 plus metapodial segment SubClassOf has skeleton some digit 1 digitopodial skeleton

Changes for: digit 2 plus metapodial segment

• Deleted
  • - digit 2 plus metapodial segment SubClassOf has skeleton some digit 2 digitopodial skeleton
• Added
  • + digit 2 plus metapodial segment SubClassOf has skeleton some digit 2 digitopodial skeleton

Changes for: mesothelium of pleural cavity

• Added
  • + mesothelium of pleural cavity database cross reference FMA:18148
  • + mesothelium of pleural cavity has exact synonym mesothelium of pleura { database cross reference=FMA:18148 }
  • + mesothelium of pleural cavity has exact synonym pleural mesothelium { database cross reference=EMAPA:16775 }
  • + mesothelium of pleural cavity has related synonym pleura { database cross reference=EMAPA:16775 }

Changes for: mesothelium of pericardial cavity

• Deleted
  • - mesothelium of pericardial cavity EquivalentTo mesothelium and located in some pericardial cavity
  • - mesothelium of pericardial cavity SubClassOf located in some pericardial cavity
  • - mesothelium of pericardial cavity database cross reference EMAPA:16133
  • - mesothelium of pericardial cavity definition A mesothelium that is part of a pericardial cavity [Automatically generated definition]. { database cross reference=OBOL:automatic }
• Added
  • + mesothelium of pericardial cavity EquivalentTo mesothelium and part of some pericardium
  • + mesothelium of pericardial cavity SubClassOf part of some pericardium
  • + mesothelium of pericardial cavity definition A mesothelium that is part of a pericardium [Automatically generated definition]. { database cross reference=OBOL:automatic }

Changes for: epithelium of vomeronasal organ

• Deleted
  • - epithelium of vomeronasal organ SubClassOf ecto-epithelium
  • - epithelium of vomeronasal organ SubClassOf respiratory system epithelium
• Added
  • + epithelium of vomeronasal organ SubClassOf nose epithelium

Changes for: epithelium of nasal septum

• Deleted
  • - epithelium of nasal septum SubClassOf ecto-epithelium
  • - epithelium of nasal septum SubClassOf respiratory system epithelium
• Added
  • + epithelium of nasal septum SubClassOf nose epithelium

Changes for: epithelium of tongue

• Added
  • + epithelium of tongue SubClassOf sensory organ epithelium

Changes for: epithelium of submandibular gland

• Added
  • + epithelium of submandibular gland has related synonym submaxillary gland epithelium { database cross reference=EMAPA:18813 }

Changes for: digit 3 plus metapodial segment

• Deleted
  • - digit 3 plus metapodial segment SubClassOf has skeleton some digit 3 digitopodial skeleton
• Added
  • + digit 3 plus metapodial segment SubClassOf has skeleton some digit 3 digitopodial skeleton

Changes for: digit 5 plus metapodial segment

• Deleted
  • - digit 5 plus metapodial segment SubClassOf has skeleton some digit 5 digitopodial skeleton
• Added
  • + digit 5 plus metapodial segment SubClassOf has skeleton some digit 5 digitopodial skeleton

Changes for: digit 4 plus metapodial segment

• Deleted
  • - digit 4 plus metapodial segment SubClassOf has skeleton some digit 4 digitopodial skeleton
• Added
  • + digit 4 plus metapodial segment SubClassOf has skeleton some digit 4 digitopodial skeleton

Changes for: kidney field

• Deleted
  • - kidney field SubClassOf developing anatomical structure
• Added
  • + kidney field EquivalentTo anlage and has potential to develop into some kidney
  • + kidney field SubClassOf anlage
  • + kidney field SubClassOf embryonic tissue

Changes for: anlage

• Deleted
  • - anlage definition Anlagen are populations of contiguous cells, typically arranged in one plane, that are morphologically indistinct, but that already correspond in extent to a later organ/tissue. { database cross reference=http://en.wikipedia.org/wiki/Anlage_(biology) , database cross reference=FBbt:00005426 , database cross reference=JB:DEF }
  • - anlage has related synonym field
• Added
  • + anlage definition Anlagen are populations of contiguous cells, typically arranged in one plane, that are morphologically indistinct, but that already correspond in extent to a later organ/tissue. { database cross reference=http://flybase.org/reports/FBrf0178740.html , database cross reference=FBbt:00005426 , database cross reference=JB:DEF }
  • + anlage has broad synonym field
  • + anlage has exact synonym developmental field
  • + anlage has related synonym future organ
  • + anlage has related synonym organ field

Changes for: pancreatic juice

• Added
  • + pancreatic juice has related synonym pancreatic fluid
  • + pancreatic juice has related synonym pancreatic secretion

Changes for: hair root

• Added
  • + hair root database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Hair_Follicle_Inferior_Segment

Changes for: body wall

• Added
  • + body wall has exact synonym wall fo trunk { database cross reference=FMA:10427 }

Changes for: tarsal region

• Deleted
  • - tarsal region SubClassOf has skeleton some tarsal skeleton
• Added
  • + tarsal region SubClassOf has skeleton some tarsal skeleton

Changes for: metacarpus region

• Deleted
  • - metacarpus region SubClassOf has skeleton some metacarpus skeleton
• Added
  • + metacarpus region SubClassOf has skeleton some metacarpus skeleton

Changes for: carpal region

• Deleted
  • - carpal region SubClassOf has skeleton some carpal skeleton
• Added
  • + carpal region SubClassOf has skeleton some carpal skeleton

Changes for: pigment epithelium of eye

• Deleted
  • - pigment epithelium of eye SubClassOf epithelium
• Added
  • + pigment epithelium of eye SubClassOf sensory organ epithelium

Changes for: olfactory rosette

• Deleted
  • - olfactory rosette SubClassOf ecto-epithelium
  • - olfactory rosette SubClassOf respiratory system epithelium
• Added
  • + olfactory rosette SubClassOf nose epithelium

Changes for: accessory olfactory bulb glomerular layer

• Added
  • + accessory olfactory bulb glomerular layer database cross reference DMBA:AGlom
  • + accessory olfactory bulb glomerular layer has exact synonym AOB, glomerular layer { database cross reference=DMBA:AGlom }

Changes for: hippocampus alveus

• Added
  • + hippocampus alveus SubClassOf central nervous system cell part cluster

Changes for: extensor digitorum communis

• Deleted
  • - extensor digitorum communis SubClassOf has muscle antagonist some flexor digitorum profundus
  • - extensor digitorum communis SubClassOf has muscle antagonist some flexor digitorum superficialis
• Added
  • + extensor digitorum communis SubClassOf has muscle antagonist some flexor digitorum profundus
  • + extensor digitorum communis SubClassOf has muscle antagonist some flexor digitorum superficialis

Changes for: lemniscus

• Added
  • + lemniscus has exact synonym neuraxis lemniscus { database cross reference=FMA:83676 }

Changes for: anterior commissure anterior part

• Deleted
  • - anterior commissure anterior part SubClassOf brain commissure
  • - anterior commissure anterior part SubClassOf structure with developmental contribution from neural crest
• Added
  • + anterior commissure anterior part SubClassOf commissure of telencephalon

Changes for: decidua capsularis

• Added
  • + decidua capsularis has related synonym antimesometrial decidua { database cross reference=EMAPA:35271 }

Changes for: fundus of urinary bladder

• Added
  • + fundus of urinary bladder has related synonym bladder dome { database cross reference=EMAPA:35173 }

Changes for: genu of corpus callosum

• Added
  • + genu of corpus callosum has exact synonym corpus callosum genu { database cross reference=FMA:61946 }

Changes for: perirhinal cortex

• Added
  • + perirhinal cortex SubClassOf part of some insula

Changes for: body of corpus callosum

• Added
  • + body of corpus callosum has exact synonym corpus callosum body { database cross reference=FMA:61947 }

Changes for: dorsal longitudinal fasciculus

• Deleted
  • - dorsal longitudinal fasciculus database cross reference http://www.snomedbrowser.com/Codes/Details/369082006
  • - dorsal longitudinal fasciculus has related synonym fasciculus longitudinalis posterior; fasciculus longitudinalis dorsalis { database cross reference=http://en.wikipedia.org/wiki/Dorsal_longitudinal_fasciculus , has synonym type=latin term }
• Added
  • + dorsal longitudinal fasciculus has related synonym fasciculus longitudinalis dorsalis { database cross reference=http://en.wikipedia.org/wiki/Dorsal_longitudinal_fasciculus , has synonym type=latin term }
  • + dorsal longitudinal fasciculus has related synonym fasciculus longitudinalis posterior { database cross reference=http://en.wikipedia.org/wiki/Dorsal_longitudinal_fasciculus , has synonym type=latin term }

Changes for: ventral acoustic stria

• Deleted
  • - ventral acoustic stria SubClassOf brainstem white matter
  • - ventral acoustic stria SubClassOf white matter of hindbrain
• Added
  • + ventral acoustic stria SubClassOf white matter of pontine tegmentum

Changes for: posterior part of anterior commissure

• Deleted
  • - posterior part of anterior commissure SubClassOf brain commissure
  • - posterior part of anterior commissure SubClassOf structure with developmental contribution from neural crest
• Added
  • + posterior part of anterior commissure SubClassOf commissure of telencephalon

Changes for: hypochord

• Added
  • + hypochord has exact synonym ipochord { database cross reference=XAO:0000056 }

Changes for: midbrain-hindbrain boundary

• Added
  • + midbrain-hindbrain boundary has related synonym isthmic organizer territory { database cross reference=XAO:0000016 }

Changes for: primitive knot

• Added
  • + primitive knot has related synonym Henson’s node { database cross reference=EMAPA:16075 }

Changes for: intermediate mesoderm

• Added
  • + intermediate mesoderm has related synonym intermediate plate { database cross reference=EMAPA:16178 }

Changes for: optic cup

• Added
  • + optic cup has related synonym eyecup { database cross reference=BTO:0005351 }
  • + optic cup has related synonym ophtalmic cup { database cross reference=BTO:0005351 }

Changes for: mesonephric duct

• Added
  • + mesonephric duct SubClassOf develops from some nephric ridge

Changes for: trunk neural crest

• Added
  • + trunk neural crest has exact synonym TNC { database cross reference=XAO:0000319 , has synonym type=abbreviation }

Changes for: dorsal fin

• Deleted
  • - dorsal fin SubClassOf has skeleton some dorsal fin skeleton
• Added
  • + dorsal fin SubClassOf has skeleton some dorsal fin skeleton

Changes for: cranial neural crest

• Added
  • + cranial neural crest has exact synonym CNC { database cross reference=XAO:0001001 , has synonym type=abbreviation }

Changes for: pharyngeal arch artery 1

• Added
  • + pharyngeal arch artery 1 has related synonym first arch artery { database cross reference=EMAPA:16685 }

Changes for: urinary bladder urothelium

• Added
  • + urinary bladder urothelium has related synonym epithelium of bladder { database cross reference=EMAPA:28601 }

Changes for: afferent arteriole

• Deleted
  • - afferent arteriole database cross reference MP:0011312

Changes for: habenular nucleus

• Added
  • + habenular nucleus database cross reference DHBA:HN
  • + habenular nucleus database cross reference HBA:Hb
  • + habenular nucleus has related synonym habenular nuclei { database cross reference=DHBA:HN , has synonym type=plural term }

Changes for: open tracheal system trachea

• Deleted
  • - open tracheal system trachea definition A trachea composed of composed of spiracles, tracheae, and tracheoles [Wikipedia]. An open tracheal system is a respiratory system, a branched network of epithelial tubes that supplies oxygen to target tissues via spiracles. An example of this is found in Drosophila melanogaster. { database cross reference=http://en.wikipedia.org/wiki/Invertebrate_trachea , database cross reference=GO:0007424 }
  • - open tracheal system trachea editor note TODO check if is_a epithelium
• Added
  • + open tracheal system trachea SubClassOf part of some open tracheal system
  • + open tracheal system trachea definition A respiratory airway that is part of an open tracheal system. { database cross reference=UBERON:cjm }

Changes for: cerebellar peduncle

• Added
  • + cerebellar peduncle has related synonym cerebellum peduncle { database cross reference=EMAPA:35213 }

Changes for: external naris epithelium

• Deleted
  • - external naris epithelium SubClassOf ecto-epithelium
  • - external naris epithelium SubClassOf respiratory system epithelium
• Added
  • + external naris epithelium SubClassOf nose epithelium

Changes for: Harderian gland epithelium

• Deleted
  • - Harderian gland epithelium SubClassOf lacrimal gland epithelium
• Added
  • + Harderian gland epithelium SubClassOf eye epithelium

Changes for: lumen of epithelial sac

• Deleted
  • - lumen of epithelial sac EquivalentTo anatomical space and enclosed by some epithelial sac
  • - lumen of epithelial sac SubClassOf enclosed by some epithelial sac
• Added
  • + lumen of epithelial sac EquivalentTo anatomical space and luminal space of some epithelial sac
  • + lumen of epithelial sac SubClassOf luminal space of some epithelial sac

Changes for: spinal cord lateral horn

• Deleted
  • - spinal cord lateral horn has exact synonym intermediate grey column of spinal cord { database cross reference=FMA:256536 }

Changes for: primary ovarian follicle

• Deleted
  • - primary ovarian follicle has exact synonym folliculus ovaricus primarius
  • - primary ovarian follicle has exact synonym preantral follicle of ovary
• Added
  • + primary ovarian follicle definition An ovarian follicle that has one layer of granulosa cells. { database cross reference=http://ovary.stanford.edu , database cross reference=GO:0001545 , database cross reference=GOC:mtg_mpo }
  • + primary ovarian follicle has exact synonym folliculus ovaricus primarius { database cross reference=FMA:18634 , has synonym type=latin term }
  • + primary ovarian follicle has exact synonym ovary primary follicle { database cross reference=EMAPA:35631 }
  • + primary ovarian follicle has exact synonym primary ovarian follicle { database cross reference=FMA:18634 }
  • + primary ovarian follicle has related synonym preantral follicle of ovary
  • + primary ovarian follicle has related synonym primary follicle { database cross reference=EMAPA:35631 }

Changes for: tertiary ovarian follicle

• Deleted
  • - tertiary ovarian follicle definition Ovarian follicle is the basic unit of female reproductive biology and is composed of roughly spherical aggregations of cells found in the ovary. They contain a single oocyte (aka ovum or egg). These structures are periodically initiated to grow and develop, culminating in ovulation of usually a single competent oocyte. These eggs/ova are only developed once every menstrual cycle (i. e, once a month). [WP,unvetted]. { database cross reference=http://en.wikipedia.org/wiki/Graafian_follicle }

Changes for: secondary ovarian follicle

• Added
  • + secondary ovarian follicle has related synonym pre-ovulatory follicle { database cross reference=EMAPA:30777 }
  • + secondary ovarian follicle has related synonym secondary follicle { database cross reference=EMAPA:35632 }

Changes for: follicular antrum

• Added
  • + follicular antrum EquivalentTo anatomical space and part of some ovarian follicle and contains some follicular fluid
  • + follicular antrum has exact synonym ovarian follicle antrum { database cross reference=GO:0001548 }

Changes for: dorsal root ganglion

• Added
  • + dorsal root ganglion has related synonym posterior root ganglion { database cross reference=EMAPA:16668 }

Changes for: left hepatic artery

• Added
  • + left hepatic artery has exact synonym left branch of hepatic artery { database cross reference=FMA:14779 }
  • + left hepatic artery has exact synonym left part of hepatic artery proper { database cross reference=FMA:14779 }

Changes for: right hepatic artery

• Added
  • + right hepatic artery has exact synonym right branch of hepatic artery proper { database cross reference=FMA:14778 }
  • + right hepatic artery has exact synonym right part of hepatic artery proper { database cross reference=FMA:14778 }

Changes for: juxtaductal region of aortic arch

• Added
  • + juxtaductal region of aortic arch has exact synonym isthmus aorta { database cross reference=FMA:3771 }

Changes for: nose skin

• Added
  • + nose skin has exact synonym external nasal skin { database cross reference=FMA:24763 }
  • + nose skin has exact synonym skin of nose { database cross reference=FMA:24763 }

Changes for: axilla skin

• Added
  • + axilla skin has exact synonym axillary skin { database cross reference=FMA:37322 }

Changes for: appendage

• Added
  • + appendage has related synonym appendages { database cross reference=XAO:0000218 , has synonym type=plural term }

Changes for: accessory olfactory bulb mitral cell layer

• Added
  • + accessory olfactory bulb mitral cell layer database cross reference http://uri.neuinfo.org/nif/nifstd/nlx_anat_1005002

Changes for: dental follicle

• Added
  • + dental follicle has related synonym dental sac { database cross reference=MA:0003121 }

Changes for: blastocele

• Added
  • + blastocele has related synonym blastocelic cavity { database cross reference=EMAPA:16044 }

Changes for: lung parenchyma

• Added
  • + lung parenchyma has related synonym pulmonary parenchyma { database cross reference=EMAPA:35522 }

Changes for: mesonephros

• Added
  • + mesonephros has related synonym amphibian adult kidney { database cross reference=XAO:0000141 }

Changes for: fornix of brain

• Added
  • + fornix of brain has exact synonym forebrain fornix { database cross reference=FMA:61965 }

Changes for: duct

• Added
  • + duct has related synonym ducts { database cross reference=XAO:0004000 , has synonym type=plural term }

Changes for: organ

• Deleted
  • - organ external ontology notes CARO does not include a generic ‘organ’ class, only simple and compound organ
• Added
  • + organ external ontology notes CARO v1 does not include a generic ‘organ’ class, only simple and compound organ. CARO v2 may include organ, see https://github.com/obophenotype/caro/issues/4

Changes for: parasternal process

• Added
  • + parasternal process has exact synonym posterior stalk of intercalvicle
  • + parasternal process has exact synonym posterior stem of interclavicle

Changes for: manual digit 7 plus metapodial segment

• Deleted
  • - manual digit 7 plus metapodial segment SubClassOf has skeleton some manual digit 7 digitopodial skeleton
• Added
  • + manual digit 7 plus metapodial segment SubClassOf has skeleton some manual digit 7 digitopodial skeleton

Changes for: manual digit 6 plus metapodial segment

• Deleted
  • - manual digit 6 plus metapodial segment SubClassOf has skeleton some manual digit 6 digitopodial skeleton
• Added
  • + manual digit 6 plus metapodial segment SubClassOf has skeleton some manual digit 6 digitopodial skeleton

Changes for: pedal digit 6 plus metapodial segment

• Deleted
  • - pedal digit 6 plus metapodial segment SubClassOf has skeleton some pedal digit 6 digitopodial skeleton
• Added
  • + pedal digit 6 plus metapodial segment SubClassOf has skeleton some pedal digit 6 digitopodial skeleton

Changes for: manual digit 8 plus metapodial segment

• Deleted
  • - manual digit 8 plus metapodial segment SubClassOf has skeleton some manual digit 8 digitopodial skeleton
• Added
  • + manual digit 8 plus metapodial segment SubClassOf has skeleton some manual digit 8 digitopodial skeleton

Changes for: eye trabecular meshwork

• Deleted
  • - reticulum trabeculare label reticulum trabeculare
• Added
  • + eye trabecular meshwork has exact synonym reticulum trabeculare { database cross reference=BTO:0001605 }
  • + eye trabecular meshwork label eye trabecular meshwork

Changes for: hair outer root sheath

• Added
  • + hair outer root sheath database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Outer_Hair_Sheath
  • + hair outer root sheath has related synonym outer hair sheath

Changes for: conjunctival sac

• Added
  • + conjunctival sac has narrow synonym subbrillar sac { database cross reference=NCBITaxon:8570 }

Changes for: insect labrum

• Deleted
  • - insect labrum database cross reference Labrum
• Added
  • + insect labrum database cross reference http://en.wikipedia.org/wiki/Labrum_(arthropod_mouthpart)

Changes for: lumen of digestive tract

• Deleted
  • - lumen of digestive tract EquivalentTo anatomical space and enclosed by some digestive tract
  • - lumen of digestive tract SubClassOf enclosed by some digestive tract
• Added
  • + lumen of digestive tract EquivalentTo anatomical space and luminal space of some digestive tract
  • + lumen of digestive tract SubClassOf luminal space of some digestive tract

Changes for: digestive system fluid or secretion

• Added
  • + digestive system fluid or secretion has related synonym digestive juice { database cross reference=BTO:0000346 }

Changes for: 3rd arch pharyngeal cleft

• Added
  • + 3rd arch pharyngeal cleft has related synonym 3rd branchial cleft { database cross reference=EMAPA:16581 }

Changes for: 2nd arch pharyngeal cleft

• Added
  • + 2nd arch pharyngeal cleft has related synonym 2nd branchial cleft { database cross reference=EMAPA:16396 }

Changes for: 1st arch pharyngeal cleft

• Added
  • + 1st arch pharyngeal cleft has related synonym 1st branchial cleft { database cross reference=EMAPA:16119 }

Changes for: 4th arch pharyngeal cleft

• Added
  • + 4th arch pharyngeal cleft has related synonym 4th branchial cleft { database cross reference=EMAPA:16761 }

Changes for: post-hyoid pharyngeal arch skeleton

• Added
  • + post-hyoid pharyngeal arch skeleton has related synonym pharyngeal arch skeleton 3-7 { database cross reference=XAO:0003180 }

Changes for: stomach glandular region mucosa

• Added
  • + stomach glandular region mucosa has exact synonym stomach glandular region glandular mucous membrane { database cross reference=EMAPA:27167 }

Changes for: prepollex

• Deleted
  • - prepollex SubClassOf has skeleton some prepollex skeleton
• Added
  • + prepollex SubClassOf has skeleton some prepollex skeleton

Changes for: mesonephric early distal tubule

• Added
  • + mesonephric early distal tubule has related synonym straight distal segment { database cross reference=XAO:0000333 }

Changes for: gracile fasciculus

• Deleted
  • - gracile fasciculus has related synonym accessory olfactory bulb granule cell layer { database cross reference=BAMS:gr }
  • - gracile fasciculus has related synonym main olfactory bulb granule cell layer { database cross reference=BAMS:gr }

Changes for: submandibular gland primordium epithelium

• Added
  • + submandibular gland primordium epithelium has related synonym submaxillary gland primordium epithelium { database cross reference=EMAPA:17756 }

Changes for: dorsal aorta

• Added
  • + dorsal aorta has exact synonym aorta dorsalis { database cross reference=XAO:0000051 , has synonym type=latin term }

Changes for: cochlear ganglion

• Added
  • + cochlear ganglion has related synonym vestibulocochlear ganglion cochlear component { database cross reference=EMAPA:17572 }

Changes for: maxillary nerve

• Added
  • + maxillary nerve has related synonym trigeminal nerve maxillary division { database cross reference=EMAPA:17799 }

Changes for: mandibular nerve

• Added
  • + mandibular nerve has related synonym trigeminal nerve mandibular division { database cross reference=EMAPA:17798 }

Changes for: hindlimb stylopod

• Deleted
  • - hindlimb stylopod SubClassOf has skeleton some femur endochondral element
• Added
  • + hindlimb stylopod SubClassOf has skeleton some femur endochondral element

Changes for: nuchal ligament

• Deleted
  • - nuchal ligament definition A fibrous membrane, which, in the neck, represents the supraspinal ligaments of the upper vertebræ. { database cross reference=http://en.wikipedia.org/wiki/Nuchal_ligament }
• Added
  • + nuchal ligament definition A fibrous membrane, which, in the neck, represents the supraspinal ligaments of the upper vertebrae. { database cross reference=http://en.wikipedia.org/wiki/Nuchal_ligament }

Changes for: preputial gland

• Deleted
  • - preputial gland definition A modified sebacious gland that is located in front of the genitals of some mammals (including mice) and produces pheromones[WP, modified]. { database cross reference=http://en.wikipedia.org/wiki/Preputial_gland }
  • - preputial gland dubious for taxon http://purl.obolibrary.org/obo/NCBITaxon_9606 { source=ISBN10:0123813611 }
• Added
  • + preputial gland definition A aired, lobulated, modified sebaceous glands located in the inguinal region adjacent to the penis and vagina, with pheromonal functions in male rodents; in males, the preputial gland empties into the preputial cavity and in females, the preputial (aka clitoral) gland duct empties into the clitoral fossa. { database cross reference=MP:0013329 }

Changes for: myelin sheath

• Added
  • + myelin sheath database cross reference FMA:62983

Changes for: ophthalmic nerve

• Added
  • + ophthalmic nerve has related synonym trigeminal nerve ophthalmic division { database cross reference=EMAPA:17800 }

Changes for: lateral tuberal nucleus

• Deleted
  • - lateral tuberal nucleus has exact synonym Lateral tuberal hypothalamic nuclei { database cross reference=FMA:62336 }
  • - lateral tuberal nucleus has exact synonym Lateral tuberal nuclei { database cross reference=FMA:62336 }
• Added
  • + lateral tuberal nucleus has exact synonym lateral tuberal hypothalamic nuclei { database cross reference=FMA:62336 }
  • + lateral tuberal nucleus has exact synonym lateral tuberal nuclei { database cross reference=FMA:62336 }

Changes for: anterior paraventricular nucleus of thalamus

• Deleted
  • - anterior paraventricular nucleus of thalamus has related synonym Periventricular hypothalamic nucleus, anterior part { database cross reference=BAMS:PVa }
• Added
  • + anterior paraventricular nucleus of thalamus has related synonym periventricular hypothalamic nucleus, anterior part { database cross reference=BAMS:PVa }

Changes for: dermal papilla

• Added
  • + dermal papilla database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Hair_Papilla
  • + dermal papilla external ontology notes ncit has ‘hair papilla’ as part of hypodermis { external ontology=ncit }
  • + dermal papilla has related synonym hair papilla

Changes for: glomerular parietal epithelium

• Added
  • + glomerular parietal epithelium has related synonym kidney parietal epithelium { database cross reference=EMAPA:35969 }

Changes for: eccrine sweat gland

• Deleted
  • - eccrine sweat gland definition An ordinary, or simple, sweat gland; they are of the merocrine type, unbranched, coiled, tubular glands that are distributed over almost all of the body surface, and promote cooling by evaporation of their secretion. { database cross reference=http://en.wikipedia.org/wiki/Eccrine_sweat_gland , database cross reference=BTO:0002323 }
• Added
  • + eccrine sweat gland definition A merocrine, unbranched, unbranched, coiled, tubular gland sweat gland. In humans, distributed over almost all of the body surface, and promote cooling by evaporation of their secretion. { database cross reference=http://en.wikipedia.org/wiki/Eccrine_sweat_gland , database cross reference=UBERON:cjm }

Changes for: paired limb/fin field

• Deleted
  • - paired limb/fin field EquivalentTo primordium and has potential to developmentally contribute to some paired limb/fin bud
  • - paired limb/fin field SubClassOf primordium
• Added
  • + paired limb/fin field EquivalentTo anlage and has potential to developmentally contribute to some paired limb/fin bud
  • + paired limb/fin field SubClassOf anlage
  • + paired limb/fin field SubClassOf embryonic tissue
  • + paired limb/fin field SubClassOf mesoderm-derived structure

Changes for: appendage girdle region

• Deleted
  • - appendage girdle region SubClassOf has skeleton some girdle skeleton
• Added
  • + appendage girdle region SubClassOf has skeleton some girdle skeleton

Changes for: major vestibular gland

• Deleted
  • - major vestibular gland SubClassOf exocrine gland
  • - major vestibular gland SubClassOf gland of integumental system
• Added
  • + major vestibular gland SubClassOf exocrine gland of integumental system

Changes for: epithelium

• Deleted
  • - epithelium SubClassOf cell layer
• Added
  • + epithelium SubClassOf tissue

Changes for: anatomical group

• Added
  • + anatomical group editor note Will be obsoleted in v2 of CARO [https://github.com/obophenotype/caro/issues/2]

Changes for: anatomical cluster

• Added
  • + anatomical cluster editor note Will be obsoleted in CARO v2 [https://github.com/obophenotype/caro/issues/3]

Changes for: female reproductive system

• Added
  • + female reproductive system has related synonym female genitals { database cross reference=XAO:0000156 , has synonym type=plural term }

Changes for: rhomboid

• Deleted
  • - rhomboid SubClassOf has muscle antagonist some serratus ventralis
• Added
  • + rhomboid SubClassOf has muscle antagonist some serratus ventralis

Changes for: tubotympanic recess lumen

• Deleted
  • - tubotympanic recess lumen EquivalentTo anatomical cavity and enclosed by some tubotympanic recess epithelium
  • - tubotympanic recess lumen SubClassOf enclosed by some tubotympanic recess epithelium
• Added
  • + tubotympanic recess lumen EquivalentTo anatomical cavity and luminal space of some tubotympanic recess epithelium
  • + tubotympanic recess lumen SubClassOf luminal space of some tubotympanic recess epithelium

Changes for: lens vesicle cavity

• Deleted
  • - lens vesicle cavity EquivalentTo anatomical space and enclosed by some lens vesicle
  • - lens vesicle cavity SubClassOf enclosed by some lens vesicle
• Added
  • + lens vesicle cavity EquivalentTo anatomical space and luminal space of some lens vesicle
  • + lens vesicle cavity SubClassOf luminal space of some lens vesicle

Changes for: dorsal mesocardium

• Added
  • + dorsal mesocardium has related synonym dorsal heart mesentery { database cross reference=EMAPA:16213 }
  • + dorsal mesocardium has related synonym dorsal mesentery of heart { database cross reference=EMAPA:16213 }

Changes for: lens anterior epithelium

• Deleted
  • - lens anterior epithelium comment Histology notes: Cells of the subcapsular epithelium (or anterior lens cells) are mitotically active. In adult individuals they only cover the anterior “hemisphere” of the lens. As they divide, cells gradually move towards the equator of the lens where they tranform into lens fibres. The apical part of the gradually elongating cell extends between the subcapsular epithelium and adjacent lens fibres towards the anterior pole of the lens. The basal part extends towards the posterior pole. The nucleus remains close to the equatorial plane of the lens - http://www.lab.anhb.uwa.edu.au/mb140/corepages/eye/eye.htm
• Added
  • + lens anterior epithelium structure notes Cells of the subcapsular epithelium (or anterior lens cells) are mitotically active. In adult individuals they only cover the anterior ‘hemisphere’ of the lens. As they divide, cells gradually move towards the equator of the lens where they tranform into lens fibres. The apical part of the gradually elongating cell extends between the subcapsular epithelium and adjacent lens fibres towards the anterior pole of the lens. The basal part extends towards the posterior pole. The nucleus remains close to the equatorial plane of the lens - http://www.lab.anhb.uwa.edu.au/mb140/corepages/eye/eye.htm

Changes for: iliac cartilage element

• Added
  • + iliac cartilage element has related synonym iliac cartilage condensation { database cross reference=EMAPA:18347 }

Changes for: pubic cartilage element

• Added
  • + pubic cartilage element database cross reference EMAPA:26928
  • + pubic cartilage element has related synonym pubic cartilage condensation { database cross reference=EMAPA:26928 }

Changes for: alular digit plus metapodial segment

• Deleted
  • - alular digit plus metapodial segment SubClassOf has skeleton some alular digit digitopodial skeleton
• Added
  • + alular digit plus metapodial segment SubClassOf has skeleton some alular digit digitopodial skeleton

Changes for: manual minor digit (Aves) plus metapodial segment

• Deleted
  • - manual minor digit (Aves) plus metapodial segment SubClassOf has skeleton some manual minor digit (Aves) digitopodial skeleton
• Added
  • + manual minor digit (Aves) plus metapodial segment SubClassOf has skeleton some manual minor digit (Aves) digitopodial skeleton

Changes for: manual major digit (Aves) plus metapodial segment

• Deleted
  • - manual major digit (Aves) plus metapodial segment SubClassOf has skeleton some manual major digit (Aves) digitopodial skeleton
• Added
  • + manual major digit (Aves) plus metapodial segment SubClassOf has skeleton some manual major digit (Aves) digitopodial skeleton

Changes for: mandibular canal

• Added
  • + mandibular canal has related synonym inferior alveolar canal { database cross reference=EMAPA:19161 }

Changes for: pelvic complex

• Deleted
  • - pelvic complex SubClassOf has skeleton some skeleton of pelvic complex
• Added
  • + pelvic complex SubClassOf has skeleton some skeleton of pelvic complex

Changes for: pectoral complex

• Deleted
  • - pectoral complex SubClassOf has skeleton some skeleton of pectoral complex
• Added
  • + pectoral complex SubClassOf has skeleton some skeleton of pectoral complex

Changes for: hypoglossal canal

• Added
  • + hypoglossal canal has related synonym anterior condylar canal { database cross reference=EMAPA:19012 }

Changes for: rhombomere 2

• Deleted
  • - rhombomere 2 has exact synonym r2 { database cross reference=ZFA:0000822 }
• Added
  • + rhombomere 2 has exact synonym r2 { database cross reference=ZFA:0000822 , has synonym type=abbreviation }

Changes for: rhombomere 8

• Deleted
  • - rhombomere 8 has exact synonym r8 { database cross reference=ZFA:0000153 }
• Added
  • + rhombomere 8 has exact synonym r8 { database cross reference=ZFA:0000153 , has synonym type=abbreviation }

Changes for: rhombomere 7

• Deleted
  • - rhombomere 7 has exact synonym r7 { database cross reference=ZFA:0000949 }
• Added
  • + rhombomere 7 has exact synonym r7 { database cross reference=ZFA:0000949 , has synonym type=abbreviation }

Changes for: rhombomere 6

• Deleted
  • - rhombomere 6 has exact synonym r6 { database cross reference=ZFA:0000069 }
• Added
  • + rhombomere 6 has exact synonym r6 { database cross reference=ZFA:0000069 , has synonym type=abbreviation }

Changes for: rhombomere 4

• Deleted
  • - rhombomere 4 has exact synonym r4 { database cross reference=ZFA:0001032 }
• Added
  • + rhombomere 4 has exact synonym r4 { database cross reference=ZFA:0001032 , has synonym type=abbreviation }

Changes for: digit plus metapodial segment

• Deleted
  • - digit plus metapodial segment SubClassOf has skeleton some individual digit of digitopodial skeleton
• Added
  • + digit plus metapodial segment SubClassOf has skeleton some individual digit of digitopodial skeleton

Changes for: rhombomere 5

• Deleted
  • - rhombomere 5 has exact synonym r5 { database cross reference=ZFA:0000823 }
• Added
  • + rhombomere 5 has exact synonym r5 { database cross reference=ZFA:0000823 , has synonym type=abbreviation }

Changes for: rhombomere 3

• Deleted
  • - rhombomere 3 has exact synonym r3 { database cross reference=ZFA:0000948 }
• Added
  • + rhombomere 3 has exact synonym r3 { database cross reference=ZFA:0000948 , has synonym type=abbreviation }

Changes for: pedal digit metatarsal pre-cartilage condensation

• Added
  • + pedal digit metatarsal pre-cartilage condensation has related synonym metatarsal pre-cartilage condensation { database cross reference=EMAPA:32956 }

Changes for: subcapsular sinus of lymph node

• Added
  • + subcapsular sinus of lymph node database cross reference MA:0003027
  • + subcapsular sinus of lymph node has exact synonym lymph node subcortical sinus { database cross reference=MA:0003027 }

Changes for: manual digit metacarpus cartilage element

• Added
  • + manual digit metacarpus cartilage element has related synonym metacarpal cartilage condensation { database cross reference=EMAPA:32849 }

Changes for: pedal digit metatarsal cartilage element

• Added
  • + pedal digit metatarsal cartilage element has related synonym metatarsal cartilage condensation { database cross reference=EMAPA:32951 }

Changes for: vitelline vein

• Added
  • + vitelline vein has exact synonym vascular vitelline network { database cross reference=XAO:0004147 }
  • + vitelline vein has related synonym vitelline veins { database cross reference=XAO:0004147 , has synonym type=plural term }

Changes for: rhombomere 1

• Deleted
  • - rhombomere 1 has exact synonym r1 { database cross reference=ZFA:0001031 }
• Added
  • + rhombomere 1 has exact synonym r1 { database cross reference=ZFA:0001031 , has synonym type=abbreviation }

Changes for: hyaloid vessel

• Added
  • + hyaloid vessel has exact synonym hyaloid blood vessels { database cross reference=XAO:0004154 , has synonym type=plural term }

Changes for: pharynx

• Added
  • + pharynx curator notes currently this is an extremely generic class, encompassing both protostomes and deuterostomes.

Changes for: pedal digit 7 plus metapodial segment

• Deleted
  • - pedal digit 7 plus metapodial segment SubClassOf has skeleton some pedal digit 7 digitopodial skeleton
• Added
  • + pedal digit 7 plus metapodial segment SubClassOf has skeleton some pedal digit 7 digitopodial skeleton

Changes for: pedal digit 8 plus metapodial segment

• Deleted
  • - pedal digit 8 plus metapodial segment SubClassOf has skeleton some pedal digit 8 digitopodial skeleton
• Added
  • + pedal digit 8 plus metapodial segment SubClassOf has skeleton some pedal digit 8 digitopodial skeleton

Changes for: mantle cavity

• Deleted
  • - mantle cavity EquivalentTo anatomical space and enclosed by some mantle
  • - mantle cavity SubClassOf enclosed by some mantle
• Added
  • + mantle cavity EquivalentTo anatomical space and luminal space of some mantle
  • + mantle cavity SubClassOf luminal space of some mantle

Changes for: plantar foot interosseous muscle

• Deleted
  • - plantar foot interosseous muscle SubClassOf has muscle antagonist some dorsal pes interosseous muscle
• Added
  • + plantar foot interosseous muscle SubClassOf has muscle antagonist some dorsal pes interosseous muscle

Changes for: right lung alveolar system

• Deleted
  • - right lung alveolar system SubClassOf anatomical system
• Added
  • + right lung alveolar system SubClassOf organ system subdivision

Changes for: left lung alveolar system

• Deleted
  • - left lung alveolar system SubClassOf anatomical system
• Added
  • + left lung alveolar system SubClassOf organ system subdivision

Changes for: alveolar system

• Deleted
  • - alveolar system SubClassOf anatomical system
• Added
  • + alveolar system SubClassOf organ system subdivision

Changes for: male reproductive system fluid/secretion

• Deleted
  • - male reproductive system fluid/secretion SubClassOf organism substance
• Added
  • + male reproductive system fluid/secretion SubClassOf reproductive system fluid/secretion

Changes for: female reproductive system fluid/secretion

• Deleted
  • - female reproductive system fluid/secretion SubClassOf organism substance
• Added
  • + female reproductive system fluid/secretion SubClassOf reproductive system fluid/secretion

Changes for: vagal neural crest

• Added
  • + vagal neural crest has exact synonym VNC { database cross reference=XAO:0004191 , has synonym type=abbreviation }

Changes for: greater sac cavity

• Deleted
  • - greater sac cavity EquivalentTo anatomical space and enclosed by some greater sac
  • - greater sac cavity SubClassOf enclosed by some greater sac
• Added
  • + greater sac cavity EquivalentTo anatomical space and luminal space of some greater sac
  • + greater sac cavity SubClassOf luminal space of some greater sac

Changes for: optic fissure

• Added
  • + optic fissure has related synonym ventral choroidal fissure { database cross reference=XAO:0000474 }

Changes for: inferior glossopharyngeal IX ganglion

• Added
  • + inferior glossopharyngeal IX ganglion has related synonym glossopharyngeal inferior ganglion { database cross reference=EMAPA:17153 }

Changes for: inferior vagus X ganglion

• Added
  • + inferior vagus X ganglion has related synonym inferior vagus ganglion { database cross reference=EMAPA:17155 }

Changes for: superior glossopharyngeal IX ganglion

• Added
  • + superior glossopharyngeal IX ganglion has related synonym glossopharyngeal superior ganglion { database cross reference=EMAPA:17154 }

Changes for: olfactory bulb external plexiform layer

• Added
  • + olfactory bulb external plexiform layer database cross reference DMBA:OB-Opl
  • + olfactory bulb external plexiform layer has related synonym OB outer plexiform layer { database cross reference=DMBA:OB-Opl }

Changes for: olfactory bulb granule cell layer

• Added
  • + olfactory bulb granule cell layer database cross reference DMBA:OB-Gr

Changes for: olfactory bulb internal plexiform layer

• Added
  • + olfactory bulb internal plexiform layer database cross reference DHBA:OBipl
  • + olfactory bulb internal plexiform layer database cross reference DMBA:OB-Ipl
  • + olfactory bulb internal plexiform layer database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=2713
  • + olfactory bulb internal plexiform layer has related synonym inner plexiform layer of the main olfactory bulb { database cross reference=NeuroNames:2713 }
  • + olfactory bulb internal plexiform layer has related synonym internal plexiform layer of olfactory bulb
  • + olfactory bulb internal plexiform layer has related synonym main olfactory bulb, inner plexiform layer { database cross reference=NeuroNames:2713 }

Changes for: ventral commissure

• Deleted
  • - ventral commissure SubClassOf brain commissure
  • - ventral commissure SubClassOf structure with developmental contribution from neural crest
• Added
  • + ventral commissure SubClassOf commissure of telencephalon

Changes for: dorsal telencephalic commissure

• Deleted
  • - dorsal telencephalic commissure SubClassOf brain commissure
  • - dorsal telencephalic commissure SubClassOf structure with developmental contribution from neural crest
• Added
  • + dorsal telencephalic commissure SubClassOf commissure of telencephalon

Changes for: paramedian lobule

• Added
  • + paramedian lobule database cross reference DHBA:CbVIIIb
  • + paramedian lobule database cross reference HBA:Cb-VIIIB
  • + paramedian lobule has exact synonym lobule VIIIB (pyramis and biventral lobule, posterior part) { database cross reference=DHBA:CbVIIIb }
  • + paramedian lobule has exact synonym paramedian lobule [h vii b] { database cross reference=FMA:72523 }

Changes for: cerebellum vermis lobule VIIb

• Added
  • + cerebellum vermis lobule VIIb database cross reference DHBA:CbVIIb
  • + cerebellum vermis lobule VIIb database cross reference HBA:Cb-VIIB
  • + cerebellum vermis lobule VIIb has related synonym lobule VIIB (gracile lobule) { database cross reference=DHBA:CbVIIb }

Changes for: spleen perifollicular zone

• Added
  • + spleen perifollicular zone present in taxon http://purl.obolibrary.org/obo/NCBITaxon_9606

Changes for: nasal cavity epithelium

• Deleted
  • - nasal cavity epithelium SubClassOf ecto-epithelium
• Added
  • + nasal cavity epithelium SubClassOf nose epithelium

Changes for: male reproductive gland

• Added
  • + male reproductive gland has related synonym accessory sex gland { database cross reference=EMAPA:19285 }

Changes for: manual digit plus metapodial segment

• Deleted
  • - manual digit plus metapodial segment SubClassOf has skeleton some manual digit digitopodial skeleton
• Added
  • + manual digit plus metapodial segment SubClassOf has skeleton some manual digit digitopodial skeleton

Changes for: footplate

• Added
  • + footplate has related synonym distal part of hindlimb bud { database cross reference=EMAPA:17249 }

Changes for: handplate

• Added
  • + handplate has related synonym distal part of forelimb bud { database cross reference=EMAPA:17245 }

Changes for: root of cranial nerve

• Deleted
  • - root of cranial nerve definition A nerve root that continuous_with a cranial nerve. { database cross reference=OBOL:automatic }
• Added
  • + root of cranial nerve definition The initial segment of a cranial nerve, leaving the central nervous system. { database cross reference=UBERON:cjm }

Changes for: lumen of open tracheal system trachea

• Deleted
  • - lumen of open tracheal system trachea EquivalentTo anatomical space and enclosed by some open tracheal system trachea
  • - lumen of open tracheal system trachea SubClassOf enclosed by some open tracheal system trachea
• Added
  • + lumen of open tracheal system trachea EquivalentTo anatomical space and luminal space of some open tracheal system trachea
  • + lumen of open tracheal system trachea SubClassOf luminal space of some open tracheal system trachea

Changes for: lumen of trachea

• Deleted
  • - lumen of trachea EquivalentTo anatomical space and enclosed by some trachea
  • - lumen of trachea SubClassOf enclosed by some trachea
• Added
  • + lumen of trachea EquivalentTo anatomical space and luminal space of some trachea
  • + lumen of trachea SubClassOf luminal space of some trachea

Changes for: plantaris

• Deleted
  • - plantaris SubClassOf has muscle antagonist some tibialis anterior
• Added
  • + plantaris SubClassOf has muscle antagonist some tibialis anterior

Changes for: vibrissa unit

• Deleted
  • - vibrissa unit SubClassOf anatomical cluster
  • - vibrissa unit SubClassOf part of some integumental system
• Added
  • + vibrissa unit EquivalentTo pilosebaceous unit and has part some strand of vibrissa hair
  • + vibrissa unit SubClassOf has part some strand of vibrissa hair
  • + vibrissa unit SubClassOf has part some venous sinus
  • + vibrissa unit SubClassOf pilosebaceous unit
  • + vibrissa unit definition A pilosebaceuous init that contains a strand of virbissa hair (a specialized tactile hair) with the follicle incorporating a blood sinus, heavily innervated by sensory nerves. { database cross reference=UBERON:cjm }

Changes for: yolk sac cavity

• Deleted
  • - yolk sac cavity EquivalentTo anatomical cavity and enclosed by some yolk sac
  • - yolk sac cavity SubClassOf enclosed by some yolk sac
• Added
  • + yolk sac cavity EquivalentTo anatomical cavity and luminal space of some yolk sac
  • + yolk sac cavity SubClassOf luminal space of some yolk sac

Changes for: stomach non-glandular region

• Added
  • + stomach non-glandular region has related synonym stomach cutaneous region { database cross reference=EMAPA:17627 }
  • + stomach non-glandular region has related synonym stomach ependymal region { database cross reference=EMAPA:17627 }

Changes for: luminal layer of epithelium

• Deleted
  • - luminal layer of epithelium SubClassOf cell layer
• Added
  • + luminal layer of epithelium SubClassOf multi cell part structure

Changes for: subluminal layer of epithelium

• Deleted
  • - subluminal layer of epithelium SubClassOf cell layer
• Added
  • + subluminal layer of epithelium SubClassOf multi cell part structure

Changes for: fibula cartilage element

• Added
  • + fibula cartilage element has related synonym fibulra cartilage condensation { database cross reference=EMAPA:18154 }

Changes for: deep white layer of superior colliculus

• Deleted
  • - deep white layer of superior colliculus SubClassOf deep layer of superior colliculus

Changes for: cardial valve

• Added
  • + cardial valve has related synonym heart valve { database cross reference=XAO:0004126 }

Changes for: heart

• Deleted
  • - heart has related synonym Herz { database cross reference=BTO:0000562 }
• Added
  • + heart has related synonym Herz@de { database cross reference=BTO:0000562 }
  • + heart has related synonym cardium { database cross reference=EMAPA:16105 }

Changes for: ventral nerve cord

• Added
  • + ventral nerve cord EquivalentTo nerve cord and intersects midsagittal plane of some ventrum
  • + ventral nerve cord SubClassOf intersects midsagittal plane of some ventrum

Changes for: proctodeum

• Added
  • + proctodeum has related synonym anus porus { database cross reference=XAO:0001019 }

Changes for: stomodeum

• Added
  • + stomodeum has broad synonym stomodeal-hypophyseal primordium { database cross reference=XAO:0000269 }

Changes for: imaginal disc

• Deleted
  • - imaginal disc SubClassOf multi-tissue structure
  • - imaginal disc definition A tissue in the larva which gives rise to the adult external cuticle. { database cross reference=http://en.wikipedia.org/wiki/Imaginal_disc , database cross reference=FB:gg }
  • - imaginal disc editor note This class was created automatically from a combination of ontologies
• Added
  • + imaginal disc SubClassOf epithelial sac
  • + imaginal disc SubClassOf part of some larva
  • + imaginal disc definition one of the parts of a holometabolous insect larva that will become a portion of the outside of the adult insect during the pupal transformation. { database cross reference=http://en.wikipedia.org/wiki/Imaginal_disc }

Changes for: head sensillum

• Added
  • + head sensillum EquivalentTo arthropod sensillum and part of some head
  • + head sensillum SubClassOf part of some head

Changes for: deep gray layer of superior colliculus

• Deleted
  • - deep gray layer of superior colliculus SubClassOf deep layer of superior colliculus
• Added
  • + deep gray layer of superior colliculus database cross reference HBA:DpG

Changes for: middle gray layer of superior colliculus

• Deleted
  • - middle gray layer of superior colliculus SubClassOf intermediate layer of superior colliculus
• Added
  • + middle gray layer of superior colliculus database cross reference HBA:MGr

Changes for: middle white layer of superior colliculus

• Deleted
  • - middle white layer of superior colliculus SubClassOf intermediate layer of superior colliculus

Changes for: white matter of superior colliculus

• Deleted
  • - white matter of superior colliculus SubClassOf layer of superior colliculus
• Added
  • + white matter of superior colliculus SubClassOf central nervous system cell part cluster

Changes for: gray matter layer of superior colliculus

• Deleted
  • - gray matter layer of superior colliculus SubClassOf layer of superior colliculus
• Added
  • + gray matter layer of superior colliculus SubClassOf central nervous system cell part cluster

Changes for: zonal layer of superior colliculus

• Deleted
  • - zonal layer of superior colliculus SubClassOf superficial layer of superior colliculus

Changes for: superficial white layer of superior colliculus

• Deleted
  • - superficial white layer of superior colliculus SubClassOf superficial layer of superior colliculus

Changes for: cerebral cortex

• Added
  • + cerebral cortex SubClassOf central nervous system cell part cluster

Changes for: optic chiasma

• Deleted
  • - optic chiasma has exact synonym decussation of optic nerve fibers
• Added
  • + optic chiasma SubClassOf continuous with some optic tract
  • + optic chiasma has exact synonym decussation of optic nerve fibers { database cross reference=FMA:62045 }

Changes for: mesopodium region

• Deleted
  • - mesopodium region SubClassOf has skeleton some mesopodial skeleton
• Added
  • + mesopodium region SubClassOf has skeleton some mesopodial skeleton

Changes for: thoracic segment of trunk

• Deleted
  • - thoracic segment of trunk SubClassOf has skeleton some thoracic skeleton
• Added
  • + thoracic segment of trunk SubClassOf has skeleton some thoracic skeleton

Changes for: metatarsus region

• Deleted
  • - metatarsus region SubClassOf has skeleton some metatarsus skeleton
• Added
  • + metatarsus region SubClassOf has skeleton some metatarsus skeleton

Changes for: kidney interstitium

• Added
  • + kidney interstitium has related synonym kidney interstitium group { database cross reference=EMAPA:28518 }

Changes for: inner renal medulla interstitium

• Added
  • + inner renal medulla interstitium has related synonym papillary interstitium { database cross reference=EMAPA:28364 }

Changes for: renal medulla interstitium

• Added
  • + renal medulla interstitium has related synonym medullary stroma { database cross reference=EMAPA:18326 }

Changes for: larynx submucosa gland

• Added
  • + larynx submucosa gland has related synonym laryngeal submucosa gland { database cross reference=EMAPA:35475 }

Changes for: right atrium valve

• Added
  • + right atrium valve has related synonym superior vena cava valve { database cross reference=EMAPA:17327 }

Report for properties

ObjectProperty objects lost from source: 5

• enclosed_by
• has_muscle_antagonist
• encloses
• has_branching_part
• has skeleton

ObjectProperty objects new in target: 5

New ObjectProperty : has skeleton

• has skeleton has related synonym has supporting framework
• has skeleton shorthand has_skeleton
• has skeleton label has skeleton
• has skeleton definition A relation between a subdivision of an organism and the single subdivision of skeleton that provides structural support for that subdivision. { database cross reference=http://orcid.org/0000-0002-6601-2165 }
• has skeleton has related synonym has sekeletal support
• has skeleton database cross reference RO:0002551
• has skeleton id has_skeleton
• has skeleton has obo namespace uberon
• SubObjectPropertyOf( has skeleton has part )

New ObjectProperty : has_branching_part

• has branching part label has_branching_part
• has branching part id has_branching_part
• TransitiveObjectProperty( has branching part )
• InverseObjectProperties( has branching part branching part of )
• has branching part has obo namespace uberon
• has branching part shorthand has_branching_part
• has branching part database cross reference RO:0002569

New ObjectProperty : has_muscle_antagonist

• has muscle antagonist has alternative id dbpprop:antagonist
• has muscle antagonist label has_muscle_antagonist
• has muscle antagonist shorthand has_muscle_antagonist
• has muscle antagonist database cross reference RO:0002568
• has muscle antagonist definition m1 has_muscle_antagonist m2 iff m1 acts in opposition to m2, and m2 is responsible for returning the structure to its initial position. { database cross reference=http://en.wikipedia.org/wiki/Antagonist_(muscle) }
• has muscle antagonist id has_muscle_antagonist
• has muscle antagonist has obo namespace uberon

New ObjectProperty : luminal space of

• luminal space of database cross reference RO:0002572
• luminal space of label luminal space of
• luminal space of has obo namespace uberon
• luminal space of shorthand luminal_space_of
• luminal space of id luminal_space_of
• SubObjectPropertyOf( luminal space of part of )

New ObjectProperty : lumen of

• lumen of shorthand lumen_of
• lumen of id lumen_of
• lumen of label lumen of
• lumen of has obo namespace uberon
• lumen of database cross reference RO:0002571
• SubObjectPropertyOf( lumen of part of )

Changed ObjectProperty objects: 3

Changes for: in_lateral_side_of

• Deleted
  • - in lateral side of see also https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern”
• Added
  • + in lateral side of see also https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern

Changes for: in_left_side_of

• Deleted
  • - in left side of see also https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern”
• Added
  • + in left side of see also https://github.com/obophenotype/uberon/wiki/Modeling-paired-structures-Design-Pattern

Changes for: branching_part_of

• Deleted
  • - InverseObjectProperties( has branching part branching part of )
• Added
  • + InverseObjectProperties( has branching part branching part of )