/releases/2014-05-16/uberon

Increased linkages between structures and stages. Using new RO IDs for structure-stage relations. Plus pharyngeal pouch fixes
/releases/2014-05-16/uberon image
  • administrative
    • expanded some curator xrefs to orcids
    • making many dbxrefs URIs in the OWL
  • skeletal
    • adding has_quality mineralized for some elements
    • NT: intertarsal-type crurotarsal joint
  • development
    • refining df relations for PA pouches 1 and 2
    • obsoleting life stage boundary
    • structure-stage relations overhaul
      • removing unused relations
      • adding RO xrefs
    • relabeled aortic arch child terms. Fixes #448
  • renal
    • renal tubule fixes, clarifying starts/ends. With dph.

Ontology Diff Report

Original Ontology

  • IRI: http://purl.obolibrary.org/obo/uberon.owl
  • VersionIRI: http://purl.obolibrary.org/obo/uberon/releases/2014-05-08/uberon.owl

New Ontology

  • IRI: http://purl.obolibrary.org/obo/uberon.owl
  • VersionIRI: http://purl.obolibrary.org/obo/uberon/releases/2014-05-16/uberon.owl

Report for classes

Class objects lost from source: 0

Class objects new in target: 3

New Class : ovarian fossa

New Class : intertarsal-type crurotarsal joint

New Class : craniopharyngeal canal

Changed Class objects: 3543

Changes for: capillary blood

Changes for: rostral linear nucleus

Changes for: paranigral nucleus

Changes for: parabrachial pigmental nucleus

Changes for: deep inguinal ring

Changes for: superficial inguinal ring

Changes for: notochordal canal

Changes for: levator nasolabialis muscle

Changes for: digit 3 digitopodial skeleton

Changes for: digit 4 digitopodial skeleton

Changes for: digit 5 digitopodial skeleton

Changes for: digit 2 digitopodial skeleton

Changes for: digit 1 digitopodial skeleton

Changes for: egg capsule

Changes for: supra-orbital ridge

Changes for: buttock

Changes for: strand of pubic hair

Changes for: sphincter colli superficialis muscle

Changes for: masseteric artery

Changes for: gingiva of upper jaw

Changes for: gingiva of lower jaw

Changes for: midgut loop

Changes for: embryonic cardiovascular system

Changes for: external cervical os

Changes for: intermammary cleft

Changes for: intermammary line

Changes for: pineal gland stalk

Changes for: jugular lymph sac

Changes for: utriculosaccular duct

Changes for: spinal cord dorsal commissural nucleus

Changes for: differentiated genital tubercle

Changes for: manual digit 5 plus metapodial segment

Changes for: manual digit 4 plus metapodial segment

Changes for: manual digit 3 plus metapodial segment

Changes for: manual digit 2 plus metapodial segment

Changes for: pedal digit 5 plus metapodial segment

Changes for: pedal digit 4 plus metapodial segment

Changes for: pedal digit 1 plus metapodial segment

Changes for: pedal digit 3 plus metapodial segment

Changes for: pedal digit 2 plus metapodial segment

Changes for: pedal digit plus metapodial segment

Changes for: manual digit 1 plus metapodial segment

Changes for: superficial fascia

Changes for: areolar gland

Changes for: dense irregular connective tissue

Changes for: loose connective tissue

Changes for: dense connective tissue

Changes for: duct of sebaceous gland

Changes for: internal acoustic meatus

Changes for: collagen fibril

Changes for: synarthrosis

Changes for: amphiarthrosis

Changes for: endomysium

Changes for: epimysium

Changes for: lacrimal nerve

Changes for: obturator muscle

Changes for: obturator internus

Changes for: uterovesical pouch

Changes for: thoracic vertebra 8

Changes for: aryepiglotticus muscle

Changes for: pyramidalis

Changes for: colorectum

Changes for: medial forebrain bundle

Changes for: mammary gland

Changes for: corpus spongiosum of penis

Changes for: colostrum

Changes for: endothelium of capillary

Changes for: milk

Changes for: lamina propria of large intestine

Changes for: endothelium of venule

Changes for: endothelium of vein

Changes for: lesser tubercle of humerus

Changes for: endothelium of arteriole

Changes for: endothelium of artery

Changes for: gastrointestinal sphincter

Changes for: epithelium of crypt of lieberkuhn

Changes for: greater tubercle of humerus

Changes for: Krause’s gland

Changes for: ophthalmic plexus

Changes for: ventral thalamus

Changes for: epithelium of trachea

Changes for: lunule of nail

Changes for: thalamic reticular nucleus

Changes for: habenula

Changes for: pineal body

Changes for: subthalamic nucleus

Changes for: zona incerta

Changes for: optic tract

Changes for: prostatic utricle

Changes for: habenular commissure

Changes for: muscle layer of large intestine

Changes for: parathyroid epithelium

Changes for: inferior parathyroid epithelium

Changes for: tuberomammillary nucleus

Changes for: lateral hypothalamic nucleus

Changes for: dorsomedial nucleus of hypothalamus

Changes for: ventromedial nucleus of hypothalamus

Changes for: arcuate nucleus of hypothalamus

Changes for: retrochiasmatic area

Changes for: paraventricular nucleus of hypothalamus

Changes for: lateral preoptic nucleus

Changes for: lateral mammillary nucleus

Changes for: medial mammillary nucleus

Changes for: central medial nucleus

Changes for: paracentral nucleus

Changes for: ventral lateral nucleus

Changes for: lateral geniculate body

Changes for: paraventricular nucleus of thalamus

Changes for: reuniens nucleus

Changes for: parafascicular nucleus

Changes for: medial geniculate body

Changes for: preoptic area

Changes for: supraoptic nucleus

Changes for: presubiculum

Changes for: epithelium of oropharynx

Changes for: epithelium of respiratory bronchiole

Changes for: Ammon’s horn

Changes for: submucosa of bronchus

Changes for: cartilage of bronchus

Changes for: white pulp of spleen

Changes for: epithelium of terminal bronchiole

Changes for: neocortex

Changes for: epithelium of nasopharynx

Changes for: sylvian cistern

Changes for: cuneiform cartilage

Changes for: gingival epithelium

Changes for: pretectal region

Changes for: midbrain tegmentum

Changes for: medial habenular nucleus

Changes for: lateral habenular nucleus

Changes for: pharyngeal arch derived gill

Changes for: regional part of spinal cord

Changes for: red nucleus

Changes for: inferior colliculus

Changes for: superior colliculus

Changes for: supramammillary nucleus

Changes for: crico-esophageal tendon

Changes for: supraoccipital pre-cartilage condensation

Changes for: venule

Changes for: lamina propria of esophagus

Changes for: serum

Changes for: epithelium of esophagus

Changes for: bile

Changes for: gastric juice

Changes for: anterior division of bed nuclei of stria terminalis

Changes for: fusiform nucleus of stria terminalis

Changes for: oval nucleus of stria terminalis

Changes for: posterior division of bed nuclei of stria terminalis

Changes for: principal nucleus of stria terminalis

Changes for: transverse nucleus of stria terminalis

Changes for: blood plasma

Changes for: semen

Changes for: substantia nigra pars reticulata

Changes for: substantia nigra pars compacta

Changes for: bronchial-associated lymphoid tissue

Changes for: retrorubral area

Changes for: mucosa-associated lymphoid tissue

Changes for: gut-associated lymphoid tissue

Changes for: elastic cartilage tissue

Changes for: olfactory epithelium

Changes for: sternocostal joint

Changes for: iliopsoas

Changes for: synovial joint of pelvic girdle

Changes for: middle cervical ganglion

Changes for: reticular layer of dermis

Changes for: papillary layer of dermis

Changes for: fibrocartilage

Changes for: hyaline cartilage tissue

Changes for: placenta

  • Deleted
    • - placenta comment Taxon notes: Eutherians: In eutherians, the chorioallantoic membrane of the fetus establishes intimate contact with the adjacent vascular wall of the mother’s uterus to produce the placenta, a composite structure formed in part from tissues of the fetus and in part from tissues of the mother [ISBN10:0073040584 “Vertebrates, Kardong”]. TODO - is taxon restriction too strict, even if we restrict def to allantoic placenta? - WP says: also found in some snakes and lizards with varying levels of development up to mammalian levels. Pough et al. 1992. Herpetology: Third Edition. Pearson Prentice Hall:Pearson Education, Inc., 2002. // See also: doi:10.1002/jmor.11011 // Marsupials possess only a rudimentary placenta, with reduced nutrient and oxygen exchanging capabilities.
    • - placenta database cross reference ncithesaurus:Placenta
  • Added
    • + placenta comment Taxon notes: Eutherians: In eutherians, the chorioallantoic membrane of the fetus establishes intimate contact with the adjacent vascular wall of the mother’s uterus to produce the placenta, a composite structure formed in part from tissues of the fetus and in part from tissues of the mother [ISBN10:0073040584 “Vertebrates, Kardong”]. TODO - is taxon restriction too strict, even if we restrict def to allantoic placenta? - WP says: also found in some snakes and lizards with varying levels of development up to mammalian levels. Pough et al. 1992. Herpetology: Third Edition. Pearson Prentice Hall:Pearson Education, Inc., 2002. // See also: http://dx.doi.org/10.1002/jmor.11011 // Marsupials possess only a rudimentary placenta, with reduced nutrient and oxygen exchanging capabilities.
    • + placenta database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Placenta

Changes for: feces

Changes for: corneal endothelium

Changes for: endothelium

Changes for: superior cervical ganglion

Changes for: carpometacarpal joint

Changes for: arteriole

Changes for: crypt of lieberkuhn of large intestine

Changes for: crypt of Lieberkuhn

Changes for: capillary

Changes for: blood vessel

Changes for: cricothyroid joint

Changes for: stifle joint

Changes for: cricoarytenoid joint

Changes for: intercarpal joint

Changes for: longissimus lumborum muscle

Changes for: root of vagus nerve

Changes for: rectovesical pouch

Changes for: sacrococcygeal symphysis

Changes for: muscle layer of small intestine

Changes for: urachus epithelium

Changes for: inferior frontal gyrus

Changes for: nucleus of medial eminence

Changes for: oral pontine reticular nucleus

Changes for: inferior central nucleus

Changes for: nucleus of pretectal area

Changes for: substantia nigra pars lateralis

Changes for: nucleus of optic tract

Changes for: mammillothalamic tract of hypothalamus

Changes for: supramammillary commissure

Changes for: paratenial nucleus

Changes for: subserosa

Changes for: muscle layer of urinary bladder

Changes for: lacrimal gland

Changes for: retromolar triangle

Changes for: tarsal gland

Changes for: lumbosacral nerve plexus

Changes for: somatic nerve plexus

Changes for: brachial nerve plexus

Changes for: conjunctiva

Changes for: palpebral conjunctiva

Changes for: nerve plexus

Changes for: sympathetic ganglion

Changes for: parasympathetic ganglion

Changes for: enteric ganglion

Changes for: posterior segment of eyeball

Changes for: capsule of lens

Changes for: autonomic ganglion

Changes for: sensory ganglion

Changes for: anterior segment of eyeball

Changes for: nasal-associated lymphoid tissue

Changes for: broad ligament of uterus

Changes for: cauda equina

Changes for: cervical artery

Changes for: diencephalon

Changes for: telencephalon

Changes for: medulla oblongata

Changes for: metencephalon

Changes for: forebrain

Changes for: midbrain

Changes for: dorsal plus ventral thalamus

Changes for: hypothalamus

Changes for: epithalamus

Changes for: dentate gyrus of hippocampal formation

Changes for: phrenic nerve

Changes for: olfactory tubercle

Changes for: nucleus accumbens

Changes for: island of calleja

Changes for: bed nucleus of stria terminalis

Changes for: gland of anal sac

Changes for: lateral olfactory tract

Changes for: choroid plexus

Changes for: internal capsule

Changes for: frontal cortex

Changes for: parietal lobe

Changes for: temporal lobe

Changes for: putamen

Changes for: caudate nucleus

Changes for: mastoid process of temporal bone

Changes for: globus pallidus

Changes for: amygdala

Changes for: medial septal nucleus

Changes for: septofimbrial nucleus

Changes for: nucleus of diagonal band

Changes for: vestibular labyrinth

Changes for: deep fascia

Changes for: sebum

Changes for: cartilage of external ear

Changes for: cerebral hemisphere

Changes for: endolymph

Changes for: saccule of membranous labyrinth

Changes for: utricle of membranous labyrinth

Changes for: semicircular duct

Changes for: cochlear duct of membranous labyrinth

Changes for: stomochord

Changes for: semicircular canal

Changes for: anterior semicircular canal

Changes for: membranous labyrinth

Changes for: lobule of pinna

Changes for: internal ear

Changes for: perilymph

Changes for: cochlea

Changes for: posterior semicircular canal

Changes for: minor salivary gland

Changes for: sublingual gland

Changes for: parotid gland

Changes for: upper lip

Changes for: lip

Changes for: saliva

Changes for: lower lip

Changes for: duct of salivary gland

Changes for: bony labyrinth

Changes for: nasal cartilage

Changes for: sebaceous gland

Changes for: sweat gland

Changes for: lacrimal gland secretion

Changes for: paranasal sinus

Changes for: mucosa of larynx

Changes for: major salivary gland

Changes for: gingiva

Changes for: outer limiting layer of retina

Changes for: photoreceptor layer of retina

Changes for: outer nuclear layer of retina

Changes for: hyoepiglottic ligament

Changes for: optic disc

Changes for: cranial nerve

Changes for: fovea centralis

  • Deleted
    • - fovea centralis database cross reference NIF_GrossAnatomy:birnlex_2543
    • - fovea centralis database cross reference ncithesaurus:Fovea_Centralis
    • - fovea centralis homology notes Definition of fovea centralis should be considered here as ‘an area centralis at the visual axis’ (reference 1). There is an uncertaincy of the relation, because: 1.-The fovea first appeared in evolution in the temporal retina of fishes. Then, in birds, the nasal fovea and bifoveal system with nasal and temporal foveas developed. The fovea disappeared in primitive mammals, and reappeared in primates. A residue of the fovea is conserved in the visual streak, and the disappearance and reappearance of the fovea, in primitive mammals and primates respectively, correlates with degeneration and restoration of cone pigment genes in photoreceptors (reference 2). 2.-Many retinal features (foveas, trichromacy, midget pathways and associated cell types) appear specific to primates. This has led to investigations in parallel with other mammalian models such as cat or rabbit. Correlation of the results often proves to be difficult, since an evolutionary scenario with transitions between the mammalian models is largely lacking (reference 3).[uncertain][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001572 , ontology=VHOG , source=http://bgee.unil.ch/ , source=DOI:10.1017/S095252380623342X Ahnelt PK, Schubert C, Kübber-Heiss A, Schiviz A, Anger E, Independent variation of retinal S and M cone photoreceptor topographies: A survey of four families of mammals. Visual neuroscience (2006), PMID:11193946 Azuma N, Molecular cell biology on morphogenesis of the fovea and evolution of the central vision. Nihon Ganka Gakkai Zasshi (2000), DOI:10.1016/S1350-9462(00)00012-4 Ahnelt PK, Kolb H, The mammalian photoreceptor mosaic-adaptive design. Progress in Retinal and Eye Research (2000) }
  • Added
    • + fovea centralis database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Fovea_Centralis
    • + fovea centralis database cross reference http://uri.neuinfo.org/nif/nifstd/birnlex_2543
    • + fovea centralis homology notes Definition of fovea centralis should be considered here as ‘an area centralis at the visual axis’ (reference 1). There is an uncertaincy of the relation, because: 1.-The fovea first appeared in evolution in the temporal retina of fishes. Then, in birds, the nasal fovea and bifoveal system with nasal and temporal foveas developed. The fovea disappeared in primitive mammals, and reappeared in primates. A residue of the fovea is conserved in the visual streak, and the disappearance and reappearance of the fovea, in primitive mammals and primates respectively, correlates with degeneration and restoration of cone pigment genes in photoreceptors (reference 2). 2.-Many retinal features (foveas, trichromacy, midget pathways and associated cell types) appear specific to primates. This has led to investigations in parallel with other mammalian models such as cat or rabbit. Correlation of the results often proves to be difficult, since an evolutionary scenario with transitions between the mammalian models is largely lacking (reference 3).[uncertain][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001572 , ontology=VHOG , source=http://bgee.unil.ch/ , source=DOI:10.1017/S095252380623342X Ahnelt PK, Schubert C, Kübber-Heiss A, Schiviz A, Anger E, Independent variation of retinal S and M cone photoreceptor topographies: A survey of four families of mammals. Visual neuroscience (2006), http://www.ncbi.nlm.nih.gov/pubmed/11193946 Azuma N, Molecular cell biology on morphogenesis of the fovea and evolution of the central vision. Nihon Ganka Gakkai Zasshi (2000), DOI:10.1016/S1350-9462(00)00012-4 Ahnelt PK, Kolb H, The mammalian photoreceptor mosaic-adaptive design. Progress in Retinal and Eye Research (2000) }

Changes for: spinal nerve

Changes for: layer of retina

Changes for: pigmented layer of retina

Changes for: vitreous chamber of eyeball

Changes for: vitreous body

Changes for: manubrium sternum pre-cartilage condensation

Changes for: aqueous humor of eyeball

Changes for: vitreous humor

Changes for: inner limiting layer of retina

Changes for: inner plexiform layer of retina

Changes for: ganglionic layer of retina

Changes for: outer plexiform layer of retina

Changes for: inner nuclear layer of retina

Changes for: hemopoietic tissue

Changes for: striated border microvillus layer

Changes for: layer of microvilli

Changes for: hepatogastric ligament

Changes for: mechanoreceptor

Changes for: sensory receptor

Changes for: Meissner’s corpuscle

Changes for: Ruffini nerve ending

Changes for: dentine

Changes for: lacrimal apparatus

Changes for: cementum

Changes for: enamel

Changes for: dental pulp

Changes for: middle ear

Changes for: pinna

Changes for: periodontium

Changes for: vagus nerve

Changes for: epiglottic cartilage

Changes for: corniculate cartilage

Changes for: arytenoid cartilage

Changes for: fibrous capsule of thyroid gland

Changes for: ligament of larynx

Changes for: lymphoid tissue

Changes for: capsule of parathyroid gland

Changes for: omotransversarius muscle

Changes for: sclera

  • Deleted
    • - sclera comment Development notes: Majority derives from NC that surrounds optic cup of neurectoderm; a small temporal portion develops from the mesoderm that contributes to striated extra-ocular muscles and vascular endothelia[Rada&Johnson]. Taxon notes: Multi-tissue structure that composes the opaque fibrous outer layer of the eye[ZFA] Seko et al demonstrate chondrogenic potential doi:10.1371/journal.pone.0003709 and identify this as connective tissue. Disease notes: implicated in rheumatoid arthritis. Structure notes: continuous with the dura mater and the cornea; The sclera forms the posterior five-sixths of the connective tissue coat of the globe. Taxon notes: in fish, reptiles and monotremes the connective tissue of the sclera is skeletal
    • - sclera database cross reference ncithesaurus:Sclera
  • Added
    • + sclera comment Development notes: Majority derives from NC that surrounds optic cup of neurectoderm; a small temporal portion develops from the mesoderm that contributes to striated extra-ocular muscles and vascular endothelia[Rada&Johnson]. Taxon notes: Multi-tissue structure that composes the opaque fibrous outer layer of the eye[ZFA] Seko et al demonstrate chondrogenic potential http://dx.doi.org/10.1371/journal.pone.0003709 and identify this as connective tissue. Disease notes: implicated in rheumatoid arthritis. Structure notes: continuous with the dura mater and the cornea; The sclera forms the posterior five-sixths of the connective tissue coat of the globe. Taxon notes: in fish, reptiles and monotremes the connective tissue of the sclera is skeletal
    • + sclera database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Sclera

Changes for: corneal epithelium

Changes for: ciliary body

Changes for: pupil

Changes for: lacrimal canaliculus

Changes for: optic choroid

Changes for: substantia propria of cornea

Changes for: ciliary epithelium

Changes for: cleidobrachialis muscle

Changes for: cleidocephalicus muscle

Changes for: male external urethral sphincter

Changes for: maxillary sinus

Changes for: nasal concha

Changes for: frontal sinus

Changes for: iris

Changes for: posterior chamber of eyeball

Changes for: uvea

Changes for: mammary duct

Changes for: anterior chamber of eyeball

Changes for: prepuce

Changes for: iliothoracic muscle

Changes for: nucleus ambiguus

Changes for: mesencephalic nucleus of trigeminal nerve

Changes for: constrictor vulvae muscle

Changes for: parotidoauricular muscle

Changes for: inferior pancreaticoduodenal vein

Changes for: eyelid

Changes for: lower jaw region

Changes for: lower eyelid

Changes for: upper eyelid

Changes for: oculomotor nuclear complex

Changes for: spinal nucleus of trigeminal nerve

Changes for: secondary palate

Changes for: upper jaw region

Changes for: jaw skeleton

Changes for: nasal cavity

Changes for: eyelash

Changes for: geniculate ganglion

Changes for: internal elastic membrane

Changes for: nasal septum

Changes for: nail

Changes for: larynx

Changes for: submandibular gland

Changes for: laryngeal cartilage

Changes for: thyroid cartilage

Changes for: soft palate

Changes for: pharyngeal tonsil

Changes for: tonsillar ring

Changes for: palatine uvula

Changes for: cochlear nucleus

Changes for: oropharynx

Changes for: nasopharynx

Changes for: taste bud

Changes for: papilla of tongue

Changes for: sphenoidal sinus

Changes for: tongue

Changes for: medial vestibular nucleus

Changes for: inferior vestibular nucleus

Changes for: cutaneous trunci muscle

Changes for: tibialis posterior

Changes for: flexor digitorum longus

Changes for: cerebellar vein

Changes for: anterior auricular vein

Changes for: cerebral vein

Changes for: triceps surae

Changes for: maxillary vein

Changes for: deep temporal vein

Changes for: ethmoid bone

Changes for: temporal bone

Changes for: sphenoid bone

Changes for: trigeminal ganglion

Changes for: occipital bone

Changes for: central retinal vein

Changes for: masseteric vein

Changes for: temporal vein

Changes for: malleus bone

Changes for: incus bone

Changes for: lacrimal bone

Changes for: nasal bone

Changes for: palatine bone

Changes for: mandible

Changes for: hyoid bone

Changes for: auditory ossicle

Changes for: stapes bone

Changes for: sensory root of facial nerve

Changes for: petrous part of temporal bone

Changes for: external ear

Changes for: orbital region

Changes for: ear

Changes for: lower digestive tract

Changes for: supraoptic crest

Changes for: epithelium of gonad

Changes for: upper digestive tract

Changes for: regional part of metencephalon

Changes for: anteroventral nucleus

Changes for: angular gyrus

Changes for: area X of ventral lateral nucleus

Changes for: supramarginal gyrus

Changes for: anteromedial nucleus of thalamus

Changes for: abducens nucleus

Changes for: rhinal sulcus

Changes for: nucleus raphe obscurus

Changes for: anterodorsal nucleus of thalamus

Changes for: regional part of medulla oblongata

Changes for: ventral supraoptic decussation

Changes for: regional part of medullary raphe nuclear complex

Changes for: diagonal sulcus

Changes for: anterior subcentral sulcus

Changes for: vestibular nuclear complex

Changes for: anterior ascending limb of lateral sulcus

Changes for: pallidotegmental fasciculus

Changes for: postnatal subventricular zone

Changes for: sphincter of hepatopancreatic ampulla

Changes for: hepatopancreatic ampulla

Changes for: external urethral sphincter

Changes for: anteroventral periventricular nucleus

Changes for: ventral tegmental area

Changes for: fenestrated capillary

Changes for: anterior hypothalamic commissure

Changes for: parieto-occipital sulcus

Changes for: medullary raphe nuclear complex

Changes for: occipitotemporal sulcus

Changes for: preoccipital notch

Changes for: supraopticohypophysial tract

Changes for: cuneiform nucleus

Changes for: dorsal supraoptic decussation

Changes for: dorsolateral fasciculus of medulla

Changes for: densocellular part of medial dorsal nucleus

Changes for: dorsal longitudinal fasciculus of medulla

Changes for: magnocellular part of medial dorsal nucleus

Changes for: anterior median eminence

Changes for: cuneate fasciculus of medulla

Changes for: oral pulvinar nucleus

Changes for: intermediate orbital gyrus

Changes for: decussation of medial lemniscus

Changes for: cuneocerebellar tract

Changes for: medial pulvinar nucleus

Changes for: midbrain reticular formation

Changes for: lateral pulvinar nucleus

Changes for: ventral anterior nucleus

Changes for: anterior nucleus of hypothalamus

Changes for: regional part of midbrain tegmentum

Changes for: motor nucleus of trigeminal nerve

Changes for: medial part of medial mammillary nucleus

Changes for: cerebral crus

Changes for: body of caudate nucleus

Changes for: lateral septal nucleus

Changes for: oculomotor nerve fibers

Changes for: anterior horizontal limb of lateral sulcus

Changes for: medial longitudinal fasciculus of midbrain

Changes for: medial pes lemniscus

Changes for: superior frontal gyrus

Changes for: lateral part of medial mammillary nucleus

Changes for: septal nuclear complex

Changes for: mesencephalic tract of trigeminal nerve

Changes for: supracallosal gyrus

Changes for: medial lemniscus of midbrain

Changes for: superior medullary velum

Changes for: periamygdaloid area

Changes for: posterior parahippocampal gyrus

Changes for: anterior horn of lateral ventricle

Changes for: paralaminar part of medial dorsal nucleus

Changes for: body of lateral ventricle

Changes for: parvicellular part of medial dorsal nucleus

Changes for: gracile fasciculus of medulla

Changes for: posterior median eminence

Changes for: medial tarsal artery

Changes for: peristaltic circulatory vessel

Changes for: digestive tract

Changes for: popliteal vein

Changes for: popliteal lymph node

Changes for: inguinal lymph node

Changes for: medial plantar artery

Changes for: peroneal artery

Changes for: dorsal metatarsal vein

Changes for: small saphenous vein

Changes for: anterior tibial vein

Changes for: posterior tibial vein

Changes for: genioglossus muscle

Changes for: styloglossus

Changes for: hyoglossus muscle

Changes for: palatoglossus muscle

Changes for: facial muscle

Changes for: orbicularis oculi

Changes for: olfactory nerve

Changes for: digastric muscle

Changes for: subcostal artery

Changes for: cricothyroid muscle

Changes for: geniohyoid muscle

Changes for: mylohyoid muscle

Changes for: longus capitis muscle

Changes for: cheek

Changes for: muscle of larynx

Changes for: continuous capillary

Changes for: masseter muscle

Changes for: temporalis muscle

Changes for: stapedius muscle

Changes for: bronchial vein

Changes for: azygos vein

Changes for: pericardiacophrenic vein

Changes for: thymic vein

Changes for: extrastriate cortex

Changes for: subclavian vein

Changes for: vertebral vein

Changes for: anterior vena cava

Changes for: internal jugular vein

Changes for: left subclavian artery

Changes for: depressor labii inferioris

Changes for: buccinator muscle

Changes for: levator labii superioris

Changes for: aryepiglottic fold

Changes for: internal thoracic vein

Changes for: hindlimb zeugopod

Changes for: forelimb stylopod

Changes for: mouth mucosa

Changes for: ventral part of pharyngeal pouch 2

Changes for: dorsal part of pharyngeal pouch 3

Changes for: intercostal nerve

Changes for: ventral part of pharyngeal pouch 1

Changes for: mediastinum

Changes for: dorsal part of pharyngeal pouch 2

  • Deleted
    • - dorsal part of pharyngeal pouch 2 comment Development notes: in humans, persists as the tonsillar fossa - the endodermal lining covers the mesodermal lymphatic tissue to form the palatine tonsil[ISBN10:1607950324]
  • Added
    • + dorsal part of pharyngeal pouch 2 comment Development notes: in humans, persists as the tonsillar fossa - the endodermal lining covers the mesodermal lymphatic tissue to form the palatine tonsil[ISBN10:1607950324]. the dorsal elongation of the second pouch endoderm of all mammals, with the exception of rodents, gives rise to the epithelial lining of palatine tonsils; in rodents, the ventral portion of the second pouch appears to degenerate whereas the remaining part is incorporated into the lateral border of the pharynx; it appears that rodents no longer require tonsils as their function is carried out by the NALT (Nose/Nasal-Associated Lymphoid Tissue) system in the upper respiratory tract[MP]
    • + dorsal part of pharyngeal pouch 2 has related synonym dorsal elongation of second pouch endoderm

Changes for: tubotympanic recess epithelium

Changes for: thoracic nerve

Changes for: dorsal part of pharyngeal pouch 1

Changes for: vestibular nerve

Changes for: root of sacral nerve

Changes for: parachordal cartilage

Changes for: middle cranial fossa

Changes for: anterior cranial fossa

Changes for: root of thoracic nerve

Changes for: ventral part of pharyngeal pouch 4

Changes for: root of lumbar spinal nerve

Changes for: root of cervical nerve

Changes for: ventral part of pharyngeal pouch 3

Changes for: collection of basal ganglia

Changes for: basal nucleus of telencephalon

Changes for: lumbar nerve

Changes for: sacral nerve

Changes for: spinal nerve root

Changes for: coccygeal nerve

Changes for: ventral patch of Leydig’s organ

Changes for: levator palpebrae superioris

Changes for: ciliary muscle

Changes for: sphincter pupillae

Changes for: head or neck skin

Changes for: tensor tympani

Changes for: tonsil crypt

Changes for: medial rectus extraocular muscle

Changes for: lateral rectus extra-ocular muscle

Changes for: obsolete tunica vasculosa plexus

Changes for: ovary growing follicle

Changes for: frontal artery

Changes for: dilatator pupillae

Changes for: isthmus of thyroid gland

Changes for: spermatic artery

Changes for: auricular artery

Changes for: labial artery

Changes for: pancreaticoduodenal artery

Changes for: nephron tubule basement membrane

Changes for: bronchus basement membrane

Changes for: trachea basement membrane

Changes for: alveolar artery

Changes for: cortical arch of kidney

Changes for: mental artery

Changes for: buccal artery

Changes for: transverse facial artery

Changes for: maxillary artery

Changes for: anterior part of tongue

Changes for: occipital artery

Changes for: posterior part of tongue

Changes for: stomach primordium

Changes for: sublingual artery

Changes for: core of nucleus accumbens

Changes for: facial artery

Changes for: anterior tegmental nucleus

Changes for: shell of nucleus accumbens

Changes for: ophthalmic artery

Changes for: eyelid subcutaneous connective tissue

Changes for: lumbar sympathetic nerve trunk

Changes for: tympanic membrane epithelium

Changes for: ampullary gland

Changes for: lingual artery

Changes for: fundic gastric gland

Changes for: central tegmental tract

Changes for: ansa lenticularis

Changes for: dorsal nasal artery

Changes for: lacrimal artery

Changes for: right coronary artery

Changes for: anterior cerebral artery

Changes for: middle cerebral artery

Changes for: left coronary artery

Changes for: carotid body

Changes for: posterior communicating artery

Changes for: interalveolar septum

Changes for: central retinal artery

Changes for: alveolar wall

Changes for: coronary artery

Changes for: posterior cerebral artery

Changes for: superior cerebellar artery

Changes for: superior intercostal vein

Changes for: phrenic vein

Changes for: basilar artery

Changes for: dorsal patch of Leydig’s organ

Changes for: vein

Changes for: artery

Changes for: thoracic duct

Changes for: temporal artery

Changes for: glossopharyngeal nerve

Changes for: vestibulocochlear nerve

Changes for: trigeminal nerve

Changes for: trochlear nerve

Changes for: facial nerve

Changes for: abducens nerve

Changes for: celiac artery

Changes for: transverse sinus

Changes for: superior sagittal sinus

Changes for: oculomotor nerve

Changes for: midbrain hindbrain boundary neural plate

Changes for: superficial temporal vein

Changes for: cuboidal epithelium

Changes for: retromandibular vein

Changes for: submental vein

Changes for: facial vein

Changes for: supra-orbital vein

Changes for: right pulmonary artery

Changes for: left pulmonary artery

Changes for: hypoglossal nerve

Changes for: cardiovascular system endothelium

Changes for: aorta endothelium

Changes for: cingulate sulcus

Changes for: premammillary nucleus

Changes for: nucleus of posterior commissure

Changes for: rubrospinal tract

Changes for: circular sulcus of insula

Changes for: collateral sulcus

Changes for: spinal trigeminal tract of medulla

Changes for: solitary tract

Changes for: rostral interstitial nucleus of medial longitudinal fasciculus

Changes for: spino-olivary tract

Changes for: thoracic sympathetic nerve trunk

Changes for: mammillary peduncle

Changes for: lateral sulcus

Changes for: right lung alveolus

Changes for: left lung alveolus

Changes for: limen of insula

Changes for: mammillary princeps fasciculus

Changes for: trochlear nucleus

Changes for: claustral amygdaloid area

Changes for: entorhinal area

Changes for: medial medullary lamina of globus pallidus

Changes for: cervical spinal cord

Changes for: splanchnopleure

Changes for: regional part of thalamus

Changes for: superficial cervical lymph node

Changes for: vestibulocochlear nerve root

Changes for: longitudinal pontine fibers

Changes for: urogenital ridge

Changes for: somatopleure

Changes for: nephrogenic cord

Changes for: isthmus of cingulate gyrus

Changes for: lateral inferior limiting sulcus

Changes for: medial dorsal nucleus of thalamus

Changes for: superior temporal sulcus

Changes for: intralaminar nuclear group

Changes for: lateral nuclear group of thalamus

Changes for: transverse pontine fibers

Changes for: buccal salivary gland

Changes for: lamina of septum pellucidum

Changes for: basal forebrain

Changes for: posterior cingulate gyrus

Changes for: diagonal band of Broca

Changes for: hilum

Changes for: lung hilus

Changes for: regional part of cerebellar cortex

Changes for: medial lemniscus of medulla

Changes for: neodentate part of dentate nucleus

Changes for: intermediate periventricular nucleus

Changes for: ventral amygdalofugal projection

Changes for: hilum of dentate nucleus

Changes for: nephron tubule epithelium

Changes for: larynx epithelium

Changes for: male prepuce epithelium

Changes for: seminiferous tubule epithelium

Changes for: bile duct epithelium

Changes for: extrahepatic bile duct epithelium

Changes for: adrenal vein

Changes for: intrahepatic bile duct epithelium

Changes for: middle cardiac vein

Changes for: anterior inferior cerebellar artery

Changes for: posterior inferior cerebellar artery

Changes for: posterior periventricular nucleus

Changes for: posterior nuclear complex of thalamus

Changes for: posterior nucleus of hypothalamus

Changes for: pyramidal tract

Changes for: metathalamus

Changes for: midline nuclear group

Changes for: middle frontal gyrus

Changes for: precentral gyrus

Changes for: subcuneiform nucleus

Changes for: anterior median oculomotor nucleus

Changes for: vas deferens epithelium

Changes for: seminal vesicle epithelium

Changes for: cervix epithelium

Changes for: anterior calcarine sulcus

Changes for: bronchus basal lamina

Changes for: commissure of superior colliculus

Changes for: regional part of vestibular nuclear complex

Changes for: central tegmental tract of midbrain

Changes for: male breast

Changes for: calcarine sulcus

Changes for: nucleus subceruleus

Changes for: decussation of superior cerebellar peduncle

Changes for: lateral corticospinal tract

Changes for: brachium of superior colliculus

Changes for: postcentral gyrus

Changes for: regional part of medullary reticular formation

Changes for: pontine reticular formation

Changes for: regional part of inferior olivary complex

Changes for: external nucleus of inferior colliculus

Changes for: principal pretectal nucleus

Changes for: pericentral nucleus of inferior colliculus

Changes for: sublentiform nucleus

Changes for: posterior orbital gyrus

Changes for: temporal pole

Changes for: medial orbital gyrus

Changes for: transverse temporal sulcus

Changes for: amiculum of dentate nucleus

Changes for: lateral orbital gyrus

Changes for: olivary pretectal nucleus

Changes for: superior precentral sulcus

Changes for: basal part of pons

Changes for: temporal operculum

Changes for: neuraxis cavity

Changes for: superior frontal sulcus

Changes for: central nucleus of inferior colliculus

Changes for: medullary reticular formation

Changes for: organ cavity

Changes for: linear nucleus

Changes for: intermediate hypothalamic region

Changes for: corticotectal tract

Changes for: anatomical cavity

Changes for: regional part of superior colliculus

Changes for: interstitial nucleus of Cajal

Changes for: vestibulocerebellar tract

Changes for: anterior hypothalamic region

Changes for: ventral trigeminal tract

Changes for: digit

Changes for: pharyngeal arch

Changes for: male membranous urethra

Changes for: ureteral orifice

Changes for: gland

Changes for: antitragus

Changes for: antihelix

Changes for: sacral lymph node

Changes for: limb segment

Changes for: mediastinal lymph node

Changes for: brachial lymph node

Changes for: pancreatic lymph node

Changes for: elastic tissue

Changes for: submandibular lymph node

Changes for: tunica intima

Changes for: tunica media

Changes for: chest wall

Changes for: basicranium

Changes for: periosteum

Changes for: corpus luteum

Changes for: calcaneus

Changes for: distal tarsal bone 1

Changes for: navicular bone of pes

Changes for: distal tarsal bone 3

Changes for: distal tarsal bone 2

Changes for: face

Changes for: cuboid bone

Changes for: precentral fissure of cerebellum

Changes for: postcentral fissure of cerebellum

Changes for: skin of eyelid

Changes for: skin of lip

Changes for: skin of external ear

Changes for: primary fissure of cerebellum

Changes for: chest

Changes for: metatarsal bone

Changes for: phalanx of pes

Changes for: fibula

Changes for: tarsal bone

Changes for: distal carpal bone 3

Changes for: distal carpal bone 2

Changes for: skeletal system

Changes for: distal carpal bone 4

Changes for: distal carpal bone 1

Changes for: extraperitoneal space

Changes for: gustatory epithelium of tongue

Changes for: compact bone tissue

Changes for: carpal bone

Changes for: phalanx of manus

Changes for: epiphysis

Changes for: metaphysis

Changes for: radius bone

Changes for: ansoparamedian fissure of cerebellum

Changes for: lunate

Changes for: pisiform

Changes for: scaphoid

Changes for: ulna

Changes for: elbow joint

Changes for: wrist joint

Changes for: radial nerve

Changes for: vasa vasorum

Changes for: axillary nerve

Changes for: brachiocephalic vein

Changes for: ulnar nerve

Changes for: pectoral muscle

Changes for: ascending aorta

Changes for: Pacinian corpuscle

Changes for: muscle spindle

Changes for: neural tissue

Changes for: splenic vein

Changes for: cavernous sinus

Changes for: articular capsule

Changes for: mammalian cotyledon

Changes for: knee joint

Changes for: aggregate regional part of brain

Changes for: temporomandibular joint

Changes for: ankle joint

Changes for: hip joint

Changes for: laryngeal vocal fold

Changes for: Meckel’s diverticulum

Changes for: sinus of Valsalva

Changes for: inguinal canal

Changes for: calcaneal tendon

Changes for: intrahepatic bile duct

Changes for: extrahepatic bile duct

Changes for: circle of Willis

Changes for: glenohumeral joint

Changes for: deltoid

Changes for: infraspinatus muscle

Changes for: teres major muscle

Changes for: lymphatic vessel

Changes for: bone element

Changes for: sesamoid bone

Changes for: prepyriform area

Changes for: juxtarestiform body

Changes for: oral part of spinal trigeminal nucleus

Changes for: pedal digit

Changes for: paracentral sulcus

Changes for: shoulder

Changes for: principal sensory nucleus of trigeminal nerve

Changes for: hip

Changes for: medial olfactory gyrus

Changes for: dentatothalamic tract

Changes for: manual digit 1

Changes for: orbital operculum

Changes for: ventral posterior nucleus

Changes for: orbital sulcus

Changes for: sternoclavicular joint

Changes for: intervertebral joint

Changes for: manual digit 4

Changes for: manual digit 5

Changes for: lateral medullary reticular complex

Changes for: manual digit 3

Changes for: manual digit 2

Changes for: manual digit 1 phalanx

Changes for: intermediate reticular nucleus

Changes for: pedal digit 5

Changes for: manual digit 2 phalanx

Changes for: manual digit 3 phalanx

Changes for: manual digit 4 phalanx

Changes for: manual digit 5 phalanx

Changes for: pedal digit 2

Changes for: pedal digit 1

Changes for: pedal digit 4

Changes for: pedal digit 3

Changes for: proximal interphalangeal joint

Changes for: distal interphalangeal joint

Changes for: hemisphere of embryo

Changes for: perianal gland

Changes for: trachea cartilage

Changes for: lower respiratory tract cartilage

Changes for: paraganglion

Changes for: gland of nasal mucosa

Changes for: periampullary region of duodenum

Changes for: bronchus elastic tissue

Changes for: abductor pollicis longus

Changes for: fascia lata

Changes for: synovial bursa

Changes for: brachiocephalic artery

Changes for: extensor carpi radialis longus muscle

Changes for: flexor digitorum profundus

Changes for: extensor carpi ulnaris muscle

Changes for: extensor carpi radialis brevis muscle

Changes for: secretion of endocrine pancreas

Changes for: thymus trabecula

Changes for: esophagus secretion

Changes for: secretion of exocrine pancreas

Changes for: pronator teres

Changes for: prostate gland secretion

Changes for: eyelid muscle

Changes for: flexor carpi radialis muscle

Changes for: pancreas secretion

Changes for: flexor carpi ulnaris muscle

Changes for: upper jaw molar

Changes for: lower jaw molar

Changes for: trachea basal lamina

Changes for: mouth floor

Changes for: dorsalis pedis artery

Changes for: posterior tibial artery

Changes for: anterior tibial artery

Changes for: left common carotid artery plus branches

Changes for: vertebral artery

Changes for: right subclavian artery

Changes for: smegma

Changes for: anterior cruciate ligament of knee joint

Changes for: internal carotid artery

Changes for: dentition

Changes for: subclavian artery

Changes for: ligamentum flavum

Changes for: common carotid artery plus branches

Changes for: cuspid

Changes for: right common carotid artery plus branches

Changes for: tooth crown

Changes for: patellar ligament

Changes for: interosseous muscle of manus

Changes for: dorsal interosseous of manus

Changes for: metacarpal bone of digit 5

Changes for: brachialis muscle

Changes for: metacarpal bone of digit 4

Changes for: coracobrachialis muscle

Changes for: metacarpal bone of digit 3

Changes for: metacarpal bone of digit 2

Changes for: biceps brachii

Changes for: triceps brachii

Changes for: endocardium of right ventricle

Changes for: metacarpal bone of digit 1

Changes for: pedal digit 3 phalanx

Changes for: eyelid tarsus

Changes for: pedal digit 1 phalanx

Changes for: pedal digit 2 phalanx

Changes for: thoracic aorta

Changes for: descending aorta

Changes for: skin of pes

Changes for: skin of ankle

Changes for: skin of manus

Changes for: skin of wrist

Changes for: skin of elbow

Changes for: abdominal aorta

Changes for: gall bladder lamina propria

Changes for: gastrointestinal system lamina propria

Changes for: metatarsal bone of digit 4

Changes for: kidney pelvis urothelium

Changes for: metatarsal bone of digit 5

Changes for: urethra urothelium

Changes for: molar tooth

Changes for: gastrointestinal system mucosa

Changes for: skin of knee

Changes for: metatarsal bone of digit 1

Changes for: skin of leg

Changes for: metatarsal bone of digit 2

Changes for: metatarsal bone of digit 3

Changes for: cochlear nuclear complex

Changes for: obsolete node of ranvier

Changes for: foramen ovale of heart

Changes for: pars postrema of ventral lateral nucleus

Changes for: regional part of brain

Changes for: regional part of cerebral cortex

Changes for: rectal salt gland

Changes for: trochlear nerve fibers

Changes for: globose nucleus

Changes for: transverse orbital sulcus

Changes for: ventral tegmental decussation

Changes for: medial part of ventral lateral nucleus

Changes for: gland of anal canal

Changes for: regional part of cochlear nuclear complex

Changes for: cartilaginous neurocranium

Changes for: preoptic periventricular nucleus

Changes for: tuber cinereum

Changes for: auditory system

Changes for: vertebral centrum element

Changes for: diaphysis

  • Deleted
    • - diaphysis external definition The main or mid section (shaft) of a long bone. It is made up of cortical bone and usually contains bone marrow and adipose tissue (fat)[WP][FMA:24013, Wikipedia:Diaphysis]. { source=FMA:24013, Wikipedia:Diaphysis }
  • Added
    • + diaphysis external definition The main or mid section (shaft) of a long bone. It is made up of cortical bone and usually contains bone marrow and adipose tissue (fat)[WP][FMA:24013, http://en.wikipedia.org/wiki/Diaphysis]. { source=FMA:24013, http://en.wikipedia.org/wiki/Diaphysis }

Changes for: triangular part of inferior frontal gyrus

Changes for: tail of caudate nucleus

Changes for: capsule of medial geniculate body

Changes for: head of caudate nucleus

Changes for: median preoptic nucleus

Changes for: orbital part of inferior frontal gyrus

Changes for: cerebral peduncle

Changes for: foramen magnum

Changes for: gastrula

Changes for: tooth socket

Changes for: sella turcica

Changes for: omentum

Changes for: rotator cuff

Changes for: palatal muscle

Changes for: abdominal cavity

Changes for: bronchial lymph node

Changes for: masticatory muscle

Changes for: posterior cruciate ligament of knee joint

Changes for: subgingival dental plaque

Changes for: supragingival dental plaque

Changes for: dental plaque

Changes for: pubic symphysis

Changes for: subtalar joint

Changes for: abdominal wall

Changes for: metatarsophalangeal joint

Changes for: metacarpophalangeal joint

Changes for: limbic lobe

Changes for: atlanto-axial joint

Changes for: retroperitoneal space

Changes for: acromioclavicular joint

Changes for: sacrum

Changes for: spinothalamic tract of midbrain

Changes for: ventral nucleus of lateral lemniscus

Changes for: paraterminal gyrus

Changes for: emboliform nucleus

Changes for: fasciolar gyrus

Changes for: caudal part of ventral lateral nucleus

Changes for: superior rostral sulcus

Changes for: blastodisc

Changes for: neuropil

Changes for: precentral operculum

Changes for: jugular vein

Changes for: conceptus

Changes for: corpus cavernosum penis

Changes for: septum pellucidum

Changes for: Brodmann (1909) area 29

Changes for: Brodmann (1909) area 26

Changes for: crista ampullaris

Changes for: cerebellar vermis

Changes for: interlobular artery

Changes for: deep cervical lymph node

Changes for: medial palpebral ligament

Changes for: piriform cortex

Changes for: cochlear nerve

Changes for: cervix glandular epithelium

Changes for: endocervical epithelium

Changes for: cervical squamo-columnar junction

Changes for: ectocervix

Changes for: cervical gland

Changes for: venous system endothelium

Changes for: arterial system endothelium

Changes for: bulbus cordis

Changes for: dorsal thalamus

Changes for: bone fossa

Changes for: intercostal lymph node

Changes for: intercalated amygdaloid nuclei

Changes for: central amygdaloid nucleus

Changes for: lateral amygdaloid nucleus

Changes for: accessory basal amygdaloid nucleus

Changes for: pontobulbar nucleus

Changes for: respiratory system mucus

Changes for: supraspinal nucleus

Changes for: sublingual nucleus

Changes for: phlegm

Changes for: basal amygdaloid nucleus

Changes for: lateral part of basal amygdaloid nucleus

Changes for: medial part of basal amygdaloid nucleus

Changes for: medial pericuneate nucleus

Changes for: lateral pericuneate nucleus

Changes for: statoconial membrane

Changes for: interpolar part of spinal trigeminal nucleus

Changes for: inferior salivatory nucleus

Changes for: hypoglossal nucleus

Changes for: dorsal motor nucleus of vagus nerve

Changes for: peritrigeminal nucleus

Changes for: nucleus intercalatus

Changes for: parasolitary nucleus

Changes for: lamina VI of gray matter of spinal cord

Changes for: lamina V of gray matter of spinal cord

Changes for: lamina IV of gray matter of spinal cord

Changes for: lamina III of gray matter of spinal cord

Changes for: lamina VIII of gray matter of spinal cord

Changes for: lamina VII of gray matter of spinal cord

Changes for: nucleus of lateral olfactory tract

Changes for: medial amygdaloid nucleus

Changes for: cortical amygdaloid nucleus

Changes for: anterior amygdaloid area

Changes for: cistern of lamina terminalis

Changes for: telodiencephalic fissure

Changes for: secondary olfactory cortex

Changes for: olfactory cortex

Changes for: chiasmatic cistern

Changes for: hippocampal sulcus

Changes for: auditory cortex

Changes for: flexor hallucis longus

Changes for: popliteus muscle

Changes for: sural artery

Changes for: brachial artery

Changes for: subscapular artery

Changes for: lateral thoracic artery

Changes for: thoraco-acromial artery

Changes for: axillary artery

Changes for: pectineus muscle

Changes for: semimembranosus muscle

Changes for: gastrocnemius

Changes for: fibularis longus

Changes for: frontal lobe

Changes for: soleus muscle

Changes for: lobe of cerebral hemisphere

Changes for: primary motor cortex

Changes for: extensor digitorum longus

Changes for: tibialis anterior

Changes for: pharyngeal ectoderm

Changes for: central nervous system gray matter layer

Changes for: central nervous system white matter layer

Changes for: cerebrospinal fluid

Changes for: perineal artery

Changes for: inferior epigastric artery

Changes for: deep femoral artery

Changes for: inferior rectal artery

Changes for: coccyx

Changes for: lacrimal sac

Changes for: external acoustic meatus

Changes for: anal region

Changes for: brown adipose tissue

Changes for: white adipose tissue

Changes for: vaginal hymen

Changes for: seminiferous tubule of testis

Changes for: epithelium of vagina

Changes for: lesser sac

Changes for: mesovarium

Changes for: psoas minor muscle

Changes for: sartorius muscle

Changes for: biceps femoris

Changes for: semitendinosus

Changes for: tensor fasciae latae muscle

Changes for: quadriceps femoris

Changes for: rectus femoris

Changes for: vastus lateralis

Changes for: gluteus maximus

Changes for: gluteus medius

Changes for: nigrostriatal tract

Changes for: Mullerian tubercle

Changes for: iliacus muscle

Changes for: great saphenous vein

Changes for: femoral vein

Changes for: external anal sphincter

Changes for: obturator externus

Changes for: sacro-iliac joint

Changes for: obturator artery

Changes for: superior gluteal artery

Changes for: external iliac vein

Changes for: internal iliac vein

Changes for: inferior vesical artery

Changes for: umbilical artery

Changes for: iliolumbar artery

Changes for: superior vesical artery

Changes for: internal iliac artery

Changes for: capsule of ovary

Changes for: external iliac artery

Changes for: ovarian follicle

Changes for: left uterine tube

Changes for: germinal epithelium of ovary

Changes for: right uterine tube

Changes for: epididymis

Changes for: scrotum

Changes for: ischiocavernosus muscle

Changes for: male urethra

Changes for: prepuce of penis

Changes for: prostatic urethra

Changes for: female urethra

Changes for: lobe of prostate

Changes for: levator ani muscle

Changes for: prostate gland anterior lobe

Changes for: iliolumbar vein

Changes for: common fibular nerve

Changes for: tibial nerve

Changes for: sciatic nerve

Changes for: obturator vein

Changes for: fronto-orbital gyrus

Changes for: anterior cingulate cortex

Changes for: brain grey matter

Changes for: hindlimb skin

Changes for: manual digit skin

Changes for: pedal digit skin

Changes for: forelimb skin

Changes for: left lung alveolar duct

Changes for: right lung alveolar duct

Changes for: left lung bronchiole

Changes for: right lung bronchiole

Changes for: left lung terminal bronchiole

Changes for: right lung respiratory bronchiole

Changes for: right lung terminal bronchiole

Changes for: longissimus thoracis muscle

Changes for: left lung respiratory bronchiole

Changes for: brain white matter

Changes for: cavum septum pellucidum

Changes for: endosteum

Changes for: body of uterus

Changes for: semispinalis thoracis

Changes for: brain pia mater

Changes for: ulnar artery

Changes for: semispinalis capitis

Changes for: semispinalis cervicis

Changes for: longissimus capitis

Changes for: longissimus cervicis muscle

Changes for: spinalis thoracis muscle

Changes for: radial artery

Changes for: basilic vein

Changes for: common palmar digital artery

Changes for: spinal cord pia mater

Changes for: skin of limb

Changes for: skin of neck

Changes for: skin of abdomen

Changes for: brachial vein

Changes for: nephrogenic zone

  • Deleted
  • Added
    • + nephrogenic zone comment Taxon notes: see http://www.ncbi.nlm.nih.gov/pubmed/12761251 for description of nephrogenic zone in dogfish.

Changes for: ascidian cerebral ganglion

  • Deleted
    • - ascidian cerebral ganglion comment the CG appears to be a diencephalic brain. It originates mainly from the posterior sensory vesicle (Takamura 2002; Dufour et al. 2006) and shows endocrine activity. For examples, ascidian genes orthologous to GnRH and OT/VP, which are secreted from the hypothalamus and the NH, respectively, in vertebrates, are expressed in the cortex of the CG, suggesting that the NC is not distinctly compartmentalized as are vertebrate brains (Tsutsui et al. 1998; Kavanaugh et al. 2005; Kawada et al. 2008; Ukena et al. 2008; Kawada et al. 2009). Moreover, PC2 expression in the cortex of the CG supports possible endocrine activity (Sekiguchi et al. 2007). // Editor notes: consider merging into brain, based on PMID:21062451 “We suggest using the term ➞brain not only for the ‘dorsal ganglia’ of adult Tunicata and Pterobranchia, but also for the larval ‘cerebral ganglion’ of tunicates.”
  • Added
    • + ascidian cerebral ganglion comment the CG appears to be a diencephalic brain. It originates mainly from the posterior sensory vesicle (Takamura 2002; Dufour et al. 2006) and shows endocrine activity. For examples, ascidian genes orthologous to GnRH and OT/VP, which are secreted from the hypothalamus and the NH, respectively, in vertebrates, are expressed in the cortex of the CG, suggesting that the NC is not distinctly compartmentalized as are vertebrate brains (Tsutsui et al. 1998; Kavanaugh et al. 2005; Kawada et al. 2008; Ukena et al. 2008; Kawada et al. 2009). Moreover, PC2 expression in the cortex of the CG supports possible endocrine activity (Sekiguchi et al. 2007). // Editor notes: consider merging into brain, based on http://www.ncbi.nlm.nih.gov/pubmed/21062451 “We suggest using the term ➞brain not only for the ‘dorsal ganglia’ of adult Tunicata and Pterobranchia, but also for the larval ‘cerebral ganglion’ of tunicates.”

Changes for: placental membrane

Changes for: anal column

Changes for: lunate sulcus

Changes for: occipital pole

Changes for: intralingual sulcus

Changes for: lateral occipital sulcus

Changes for: posterior calcarine sulcus

Changes for: transverse occipital sulcus

Changes for: superior postcentral sulcus

Changes for: anterior occipital sulcus

Changes for: posterior subcentral sulcus

Changes for: subparietal sulcus

Changes for: regional part of inferior colliculus

Changes for: medial parabrachial nucleus

Changes for: anterior parolfactory sulcus

Changes for: posterior ascending limb of lateral sulcus

Changes for: parietal operculum

Changes for: marginal sulcus

Changes for: intraparietal sulcus

Changes for: inferior postcentral sulcus

Changes for: postcentral sulcus

Changes for: central sulcus

Changes for: dentate gyrus polymorphic layer

Changes for: olfactory trigone

Changes for: posterior parolfactory sulcus

Changes for: callosal sulcus

Changes for: longitudinal fissure

Changes for: gustatory epithelium

Changes for: terminal nerve

Changes for: trigeminal nucleus

Changes for: ventral posteroinferior nucleus

Changes for: magnocellular part of ventral anterior nucleus

Changes for: magnocellular part of red nucleus

Changes for: parvicellular part of ventral anterior nucleus

Changes for: parvocellular part of red nucleus

Changes for: dorsal septal nucleus

Changes for: trapezoid body

Changes for: nucleus of anterior commissure

Changes for: ventral oculomotor nucleus

Changes for: tectopontine tract

Changes for: superior occipital gyrus

Changes for: tectospinal tract

Changes for: regional part of cerebellum

Changes for: frontal operculum

Changes for: spinothalamic tract of medulla

Changes for: ventral posteromedial nucleus of thalamus

Changes for: ventral posterolateral nucleus

Changes for: lingual gyrus

Changes for: capsule of red nucleus

Changes for: anterior column of fornix

Changes for: dorsal hypothalamic area

Changes for: lateral lemniscus

Changes for: granular layer of cerebellar cortex

Changes for: rhomboidal nucleus

Changes for: medial lemniscus of pons

Changes for: caudal central oculomotor nucleus

Changes for: subfascicular nucleus

Changes for: regional part of midbrain

Changes for: regional part of intermediate hypothalamic region

Changes for: intermediate acoustic stria

Changes for: cingulate gyrus

Changes for: regional part of midbrain tectum

Changes for: rostral intralaminar nuclear group

Changes for: dorsal oculomotor nucleus

Changes for: inferior temporal sulcus

Changes for: central gray substance of pons

Changes for: caudal pontine reticular nucleus

Changes for: central oculomotor nucleus

Changes for: archicortex

Changes for: Purkinje cell layer of cerebellar cortex

Changes for: preolivary nucleus

Changes for: medial oculomotor nucleus

Changes for: oral part of ventral lateral nucleus

Changes for: triangular septal nucleus

Changes for: eyelid connective tissue

Changes for: periolivary nucleus

Changes for: larynx connective tissue

Changes for: centromedian nucleus

Changes for: parahippocampal gyrus

Changes for: molecular layer of cerebellar cortex

Changes for: intermediate oculomotor nucleus

Changes for: anterior spinocerebellar tract

Changes for: neurofilament

Changes for: bronchus connective tissue

Changes for: lateral dorsal nucleus

Changes for: ventral nucleus of medial geniculate body

Changes for: inferior pulvinar nucleus

Changes for: lateral posterior nucleus

Changes for: opercular part of inferior frontal gyrus

Changes for: pulvinar nucleus

Changes for: caudal part of ventral posterolateral nucleus of thalamus

Changes for: regional part of forebrain

Changes for: central tegmental tract of pons

Changes for: medial superior olivary nucleus

Changes for: regional part of lateral hypothalamic region

Changes for: regional part of diencephalon

Changes for: decussation of trochlear nerve

Changes for: abducens nerve fibers

Changes for: anterior nuclear group

Changes for: regional part of posterior hypothalamic region

Changes for: systemic vein

Changes for: olfactory sulcus

Changes for: middle temporal gyrus

Changes for: posterior hypothalamic region

Changes for: ventral nuclear group

Changes for: olivocochlear bundle

Changes for: posterior transverse temporal gyrus

Changes for: anterior transverse temporal gyrus

Changes for: lateral superior olivary nucleus

Changes for: obsolete neostriatum

Changes for: ventral pallidum

Changes for: future brain vesicle

Changes for: choroidal artery

Changes for: arachnoid villus

Changes for: accessory medullary lamina of globus pallidus

Changes for: internal medullary lamina of thalamus

Changes for: lateral medullary lamina of globus pallidus

Changes for: inferior precentral sulcus

Changes for: inferior frontal sulcus

Changes for: ventral corticospinal tract

Changes for: fusiform gyrus

Changes for: inferior rostral sulcus

Changes for: vestibulospinal tract

Changes for: superior temporal gyrus

Changes for: ligament of liver

Changes for: predorsal bundle

Changes for: posterior spinocerebellar tract

Changes for: olivocerebellar tract

Changes for: inferior temporal gyrus

Changes for: medial longitudinal fasciculus of medulla

Changes for: magnocellular nucleus of medial geniculate body

Changes for: regional part of epithalamus

Changes for: dorsal nucleus of medial geniculate body

Changes for: pyramidal decussation

Changes for: anterior cingulate gyrus

Changes for: coronary ligament of liver

Changes for: psoas major muscle

Changes for: serosa of uterus

Changes for: myometrium

Changes for: endometrium

Changes for: glans penis

Changes for: distal convoluted tubule

Changes for: nephron

Changes for: renal column

Changes for: proximal convoluted tubule

Changes for: Bowman’s space

Changes for: descending limb of loop of Henle

Changes for: loop of Henle

Changes for: hepatic sinusoid

Changes for: liver parenchyma

Changes for: bile canaliculus

Changes for: intralobular bile duct

Changes for: ovarian medulla

Changes for: ovarian cortex

Changes for: portal triad

Changes for: supplemental motor cortex

Changes for: parvocellular reticular nucleus

Changes for: intestinal epithelium

Changes for: premotor cortex

Changes for: pubis

Changes for: ischium

Changes for: ilium

Changes for: pelvic girdle region

Changes for: thyroepiglottic ligament

Changes for: vallecula of cerebellum

Changes for: femoral nerve

Changes for: dorsal trigeminal tract

Changes for: splenic cord

Changes for: spinothalamic tract of pons

Changes for: acetabular part of hip bone

Changes for: frontal pole

Changes for: peritoneal fluid

Changes for: motor root of trigeminal nerve

Changes for: pancreatic acinus

Changes for: dorsal longitudinal fasciculus of pons

Changes for: wall of intestine

Changes for: medial longitudinal fasciculus of pons

Changes for: subparafascicular nucleus

Changes for: trabecula of spleen

Changes for: regional part of telencephalon

Changes for: pancreas

Changes for: lumbar spinal cord

Changes for: dorsal acoustic stria

Changes for: lamina propria of urinary bladder

Changes for: cricotracheal ligament

Changes for: cricothyroid ligament

Changes for: anterior part of tympanic bone

Changes for: fronto-orbital sulcus

Changes for: mucosa of urinary bladder

Changes for: piriform cortex layer 1

Changes for: red pulp of spleen

Changes for: marginal zone of spleen

Changes for: dorsal nucleus of trapezoid body

Changes for: nucleus proprius of spinal cord

Changes for: urinary bladder

Changes for: wall of urinary bladder

Changes for: trigone of urinary bladder

Changes for: neck of urinary bladder

Changes for: spleen lymphoid follicle

Changes for: hilum of spleen

Changes for: piriform cortex layer 2

Changes for: piriform cortex layer 3

Changes for: nucleus of solitary tract

Changes for: endopiriform nucleus

Changes for: medial accessory olive

Changes for: dorsal cap of Kooy

Changes for: intestinal mucosa

Changes for: crypt of Lieberkuhn of small intestine

Changes for: interlobular bile duct

Changes for: falciform ligament

Changes for: internal anal sphincter

Changes for: anus

Changes for: deep circumflex iliac artery

Changes for: superficial circumflex iliac artery

Changes for: lamina propria of small intestine

Changes for: paraaortic body

Changes for: muscularis mucosae of large intestine

Changes for: lymph node germinal center

Changes for: right adrenal gland

Changes for: left adrenal gland

Changes for: adrenal cortex

Changes for: adrenal medulla

Changes for: right pulmonary vein

Changes for: glomerular capsule

Changes for: nephron tubule

Changes for: left pulmonary vein

Changes for: renal corpuscle

Changes for: renal papilla

Changes for: renal pelvis

Changes for: cortex of kidney

Changes for: iliac circumflex artery

Changes for: right ureter

Changes for: gastroepiploic artery

Changes for: left ureter

Changes for: quadratus lumborum

Changes for: transversus abdominis muscle

Changes for: inferior mesenteric vein

Changes for: ileal vein

Changes for: ileocolic vein

Changes for: gravid uterus

Changes for: muscularis mucosae of small intestine

Changes for: duodenal gland

Changes for: Peyer’s patch

Changes for: pancreatic tributary of splenic vein

Changes for: intestinal villus

Changes for: mucosa of large intestine

Changes for: mucosa of small intestine

Changes for: submucosa of small intestine

Changes for: submucosa of large intestine

Changes for: serosa of large intestine

Changes for: muscularis mucosae of stomach

Changes for: pyloric sphincter

Changes for: serosa of stomach

Changes for: submucosa of stomach

Changes for: root of optic nerve

Changes for: sensory root of trigeminal nerve

Changes for: lamina terminalis of cerebral hemisphere

Changes for: renal lobe

Changes for: lobule

Changes for: condyle

Changes for: epicondyle

Changes for: uterine spiral artery

Changes for: hypothalamo-hypophyseal system

Changes for: renal lymph node

Changes for: spleen venous sinus

Changes for: post-embryonic organism

Changes for: ophthalmotemporal branch of external ophthalmic artery

  • Deleted
  • Added
    • + ophthalmotemporal branch of external ophthalmic artery comment The blood supply to the (Harderian) gland has been reported in greatest detail in the sparrow Passer domesticus (Slonaker, 1918), where it is derived through the ophthalmotemporal branch of the external ophthalmic artery http://www.ncbi.nlm.nih.gov/pubmed/7559104

Changes for: olfactory bulb plexiform layer

Changes for: patella pre-cartilage condensation

Changes for: palate bone

Changes for: tibiotalar joint

Changes for: vomeronasal nerve

Changes for: right atrium endocardium

Changes for: pleuroperitoneal membrane

Changes for: primary chorionic villus

Changes for: secondary chorionic villus

Changes for: tertiary chorionic villus

Changes for: neck of tooth

Changes for: indifferent gonad

Changes for: posterior superior fissure of cerebellum

Changes for: horizontal fissure of cerebellum

Changes for: prepyramidal fissure of cerebellum

Changes for: secondary fissure of cerebellum

Changes for: right frontal lobe

Changes for: left frontal lobe

Changes for: left cerebral hemisphere

Changes for: right cerebral hemisphere

Changes for: posterolateral fissure of cerebellum

Changes for: apex of cochlea

Changes for: vestibulocochlear ganglion

Changes for: ventral cochlear nucleus

Changes for: superior part of vestibular ganglion

Changes for: inferior part of vestibular ganglion

Changes for: clivus of fovea centralis

Changes for: vestibular ganglion

Changes for: macula lutea proper

Changes for: dorsal cochlear nucleus

Changes for: zona arcuata of basilar membrane of cochlea

Changes for: thymus lymphoid tissue

Changes for: stratum zonale of thalamus

Changes for: left parietal lobe

Changes for: spinal trigeminal tract of pons

Changes for: right limbic lobe

Changes for: left occipital lobe

Changes for: right parietal lobe

Changes for: left limbic lobe

Changes for: right temporal lobe

Changes for: right occipital lobe

Changes for: left temporal lobe

Changes for: fifth lumbar dorsal root ganglion

Changes for: third lumbar dorsal root ganglion

Changes for: twelfth thoracic dorsal root ganglion

Changes for: eleventh thoracic dorsal root ganglion

Changes for: first lumbar dorsal root ganglion

Changes for: second lumbar dorsal root ganglion

Changes for: seventh thoracic dorsal root ganglion

Changes for: facial bone

Changes for: eighth thoracic dorsal root ganglion

Changes for: ninth thoracic dorsal root ganglion

Changes for: hindlimb bone

Changes for: tenth thoracic dorsal root ganglion

Changes for: diffuse reticular nucleus

Changes for: commissural nucleus of vagus nerve

Changes for: central gray substance of medulla

Changes for: caudal part of spinal trigeminal nucleus

Changes for: arcuate nucleus of medulla

Changes for: fifth sacral dorsal root ganglion

Changes for: accessory cuneate nucleus

Changes for: second sacral dorsal root ganglion

Changes for: third sacral dorsal root ganglion

Changes for: first sacral dorsal root ganglion

Changes for: cerebellar artery

Changes for: medial nucleus of trapezoid body

Changes for: ventral nucleus of trapezoid body

Changes for: thoracic dorsal root ganglion

Changes for: cervical dorsal root ganglion

Changes for: sacral dorsal root ganglion

Changes for: lumbar dorsal root ganglion

Changes for: second cervical dorsal root ganglion

Changes for: first cervical dorsal root ganglion

Changes for: anteroventral cochlear nucleus

Changes for: posteroventral cochlear nucleus

Changes for: second thoracic dorsal root ganglion

Changes for: first thoracic dorsal root ganglion

Changes for: eighth cervical dorsal root ganglion

Changes for: seventh cervical dorsal root ganglion

Changes for: sixth thoracic dorsal root ganglion

Changes for: fifth thoracic dorsal root ganglion

Changes for: third thoracic dorsal root ganglion

Changes for: fourth cervical dorsal root ganglion

Changes for: fifth cervical dorsal root ganglion

Changes for: lower jaw incisor

Changes for: third cervical dorsal root ganglion

Changes for: upper jaw incisor

Changes for: periventricular zone of hypothalamus

Changes for: lateral zone of hypothalamus

Changes for: medial zone of hypothalamus

Changes for: reticular formation

Changes for: perifornical nucleus

Changes for: anal membrane

Changes for: sphenoid bone pre-cartilage condensation

Changes for: cerumen gland

Changes for: stria vascularis of cochlear duct

Changes for: vestibular membrane of cochlear duct

Changes for: otolith

Changes for: primitive nephron

Changes for: midbrain cerebral aqueduct

Changes for: choroid plexus of third ventricle

Changes for: basioccipital pre-cartilage condensation

Changes for: optic recess of third ventricle

Changes for: indifferent external genitalia

Changes for: third ventricle

Changes for: telencephalic ventricle

Changes for: olfactory pathway

Changes for: hypogastrium

Changes for: central canal of spinal cord

Changes for: choroid plexus of fourth ventricle

Changes for: costochondral joint

Changes for: costovertebral joint

Changes for: cerumen

Changes for: brainstem

Changes for: gland of nictitating membrane

Changes for: sweat gland of eyelid

Changes for: Ciaccio’s gland

Changes for: accessory lacrimal gland

Changes for: anterior jugular vein

Changes for: proximal phalanx of manus

Changes for: diaphragm

Changes for: tubercle of rib

Changes for: costal cartilage

Changes for: external jugular vein

Changes for: pectoralis minor

Changes for: head of rib

Changes for: body of rib

Changes for: tectorial membrane of cochlea

Changes for: foramen primum

Changes for: sternothyroid muscle

Changes for: sternohyoid muscle

Changes for: omohyoid muscle

Changes for: clavicle

Changes for: cephalic vein

Changes for: lobe of liver

Changes for: latissimus dorsi muscle

Changes for: left lobe of liver

Changes for: cerebellar hemisphere

Changes for: right lobe of liver

Changes for: dorsal thoracic nucleus

Changes for: cutaneous vein

Changes for: premaxilla

Changes for: intercostal muscle

Changes for: thyrohyoid muscle

Changes for: spinal cord

Changes for: quadrate lobe of liver

Changes for: caudate lobe of liver

Changes for: lobe of thyroid gland

Changes for: right lobe of thyroid gland

Changes for: median artery

Changes for: scalenus medius

Changes for: splenius

Changes for: longus colli muscle

Changes for: left lobe of thyroid gland

Changes for: thyroglossal duct

Changes for: vomeronasal organ

  • Deleted
    • - vomeronasal organ database cross reference NeuroNames:1566
    • - vomeronasal organ homology notes (…) the vomeronasal organ is known only in some tetrapods. It is absent in most turtles, crocodiles, birds, some bats, and aquatic mammals. In amphibians, it is in a recessed area off the main nasal cavity. (…) In mammals possesing this organ, it is an isolated area of olfactory membrane within the nasal cavity that is usually connected to the mouth via the nasopalatine duct (reference 1); The opinions concerning the presence and functioning of the vomeronasal organ in humans are controversial. The vomeronasal cavities appear early in human foetuses. (…) Historical examination of the nasal septum revealed the presence of vomeronasal cavities in approximately 70% of adults. In contrast to the situation in other mammals, the organ is not supported by a rigid tube of bone or cartilage (reference 2); (…) the best evidence for the homology of the human VNO to that of other primates (and of mammals in general) is ontogenetic in nature, based on a common embryonic origin from a thickening (vomeronasal primordium) on the medial aspect of each olfactory pit (reference 3); (…) suggesting that lungfish possess a region homologous to the accessory olfactory bulb of tetrapods. Based on these results, it seems appropriate to refer to the recess epithelium as a primordium of the vomeronasal organ (reference 4). [debated][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0000665 , ontology=VHOG , source=http://bgee.unil.ch/ , source=ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.669 (ref.1), PMID:9866877 Doving KB, Trotier D, Review: Structure and function of the vomeronasal organ. The Journal of Experimental Biology (1998) (ref.2), DOI:10.1046/j.1469-7580.2001.19810077.x Smith TD, Siegel MI, Bonar CJ, Bhatnagar KP, Mooney MP, Burrows AM, Smith MA, Maico LM, The existence of the vomeronasal organ in postnatal chimpanzees and evidence for its homology with that of humans. J Anat (2001) (ref.3) , DOI:10.1002/ar.22415 Nakamuta S, Nakamuta N, Taniguchi K, Taniguchi K, Histological and ultrastructural characteristics of the primordial vomeronasal organ in lungfish. Anat Rec (Hoboken) (2012) (ref.4) }
  • Added
    • + vomeronasal organ database cross reference http://braininfo.rprc.washington.edu/centraldirectory.aspx?ID=1566
    • + vomeronasal organ homology notes (…) the vomeronasal organ is known only in some tetrapods. It is absent in most turtles, crocodiles, birds, some bats, and aquatic mammals. In amphibians, it is in a recessed area off the main nasal cavity. (…) In mammals possesing this organ, it is an isolated area of olfactory membrane within the nasal cavity that is usually connected to the mouth via the nasopalatine duct (reference 1); The opinions concerning the presence and functioning of the vomeronasal organ in humans are controversial. The vomeronasal cavities appear early in human foetuses. (…) Historical examination of the nasal septum revealed the presence of vomeronasal cavities in approximately 70% of adults. In contrast to the situation in other mammals, the organ is not supported by a rigid tube of bone or cartilage (reference 2); (…) the best evidence for the homology of the human VNO to that of other primates (and of mammals in general) is ontogenetic in nature, based on a common embryonic origin from a thickening (vomeronasal primordium) on the medial aspect of each olfactory pit (reference 3); (…) suggesting that lungfish possess a region homologous to the accessory olfactory bulb of tetrapods. Based on these results, it seems appropriate to refer to the recess epithelium as a primordium of the vomeronasal organ (reference 4). [debated][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0000665 , ontology=VHOG , source=http://bgee.unil.ch/ , source=ISBN:978-0072528305 Kardong KV, Vertebrates: Comparative Anatomy, Function, Evolution (2006) p.669 (ref.1), http://www.ncbi.nlm.nih.gov/pubmed/9866877 Doving KB, Trotier D, Review: Structure and function of the vomeronasal organ. The Journal of Experimental Biology (1998) (ref.2), DOI:10.1046/j.1469-7580.2001.19810077.x Smith TD, Siegel MI, Bonar CJ, Bhatnagar KP, Mooney MP, Burrows AM, Smith MA, Maico LM, The existence of the vomeronasal organ in postnatal chimpanzees and evidence for its homology with that of humans. J Anat (2001) (ref.3) , DOI:10.1002/ar.22415 Nakamuta S, Nakamuta N, Taniguchi K, Taniguchi K, Histological and ultrastructural characteristics of the primordial vomeronasal organ in lungfish. Anat Rec (Hoboken) (2012) (ref.4) }

Changes for: serratus dorsalis superior muscle

Changes for: dorsal horn of spinal cord

Changes for: serratus ventralis

Changes for: ventral horn of spinal cord

Changes for: dorsal funiculus of spinal cord

Changes for: scalenus posterior

Changes for: corpora quadrigemina

Changes for: popliteal artery

Changes for: iliocostalis muscle

Changes for: subscapularis muscle

Changes for: serratus dorsalis inferior muscle

Changes for: sternocleidomastoid

Changes for: olfactory tract

Changes for: vertebral column

Changes for: anterior olfactory nucleus

Changes for: cardiac muscle tissue

Changes for: lentiform nucleus

Changes for: parathyroid gland

Changes for: olfactory bulb

Changes for: smooth muscle tissue

Changes for: skeletal muscle tissue

Changes for: dorsum

Changes for: laterodorsal tegmental nucleus

Changes for: mesothelium

Changes for: dorsal root of spinal cord

Changes for: celiac ganglion

Changes for: ventral root of spinal cord

Changes for: superior mesenteric vein

Changes for: common iliac vein

Changes for: renal vein

Changes for: ovarian vein

Changes for: suprarenal vein

Changes for: median nerve

Changes for: right renal vein

Changes for: left renal vein

Changes for: hepatic vein

Changes for: testicular vein

Changes for: manubrium of sternum

Changes for: mammillary body

Changes for: xiphoid process

Changes for: haversian canal

Changes for: osteon

Changes for: body of pancreas

Changes for: tail of pancreas

Changes for: allocortex

Changes for: paleocortex

Changes for: periallocortex

Changes for: descending colon

Changes for: submucosa of trachea

Changes for: sigmoid colon

Changes for: ascending colon

Changes for: musculoskeletal system

Changes for: transverse colon

Changes for: vermiform appendix

Changes for: colon

Changes for: cystic duct

Changes for: caecum

Changes for: tympanic ring

  • Deleted
    • - tympanic ring comment AO notes: in FMA, the tympanic ring is an anatomical line. Howevever PMID:11237469 states: “the tympanic ring, which serves as support for the tympanic membrane, directs invagination of the first pharingeal cleft ectoderm to form the external acoustic meatus (EAM), which provides the outer layer of the membrane”. Taxon notes: check amphibians - in AAO “Funnel-like ring structure located lateral to the ventral ramus of the squamosal, beneath the skin; it provides support to the tympanic membrane”. Gene notes: Gsc and Prx1 are essential for tympanic ring development
  • Added
    • + tympanic ring comment AO notes: in FMA, the tympanic ring is an anatomical line. Howevever http://www.ncbi.nlm.nih.gov/pubmed/11237469 states: “the tympanic ring, which serves as support for the tympanic membrane, directs invagination of the first pharingeal cleft ectoderm to form the external acoustic meatus (EAM), which provides the outer layer of the membrane”. Taxon notes: check amphibians - in AAO “Funnel-like ring structure located lateral to the ventral ramus of the squamosal, beneath the skin; it provides support to the tympanic membrane”. Gene notes: Gsc and Prx1 are essential for tympanic ring development

Changes for: subfornical organ

Changes for: synovial joint

Changes for: spinal trigeminal tract

Changes for: gustatory nucleus

Changes for: fundus of stomach

Changes for: body of stomach

Changes for: cardia of stomach

Changes for: lesser curvature of stomach

Changes for: nerve root

Changes for: greater curvature of stomach

Changes for: pyloric antrum

Changes for: pylorus

Changes for: wall of small intestine

Changes for: macula of utricle of membranous labyrinth

Changes for: macula of saccule of membranous labyrinth

Changes for: spiral organ of cochlea

Changes for: rib

Changes for: manual minor digit (Aves) digitopodial skeleton

Changes for: manual major digit (Aves) digitopodial skeleton

Changes for: alular digit digitopodial skeleton

Changes for: hepatic acinus

Changes for: biliary tree

Changes for: portal lobule

Changes for: right hepatic duct

Changes for: left hepatic duct

Changes for: common bile duct

Changes for: common hepatic duct

Changes for: fontanelle

Changes for: thoracic cavity

Changes for: basilar membrane of cochlea

Changes for: peritoneal cavity

Changes for: costal arch

Changes for: left testicular artery

Changes for: left renal artery

Changes for: meningeal dura mater

Changes for: right renal artery

Changes for: periosteal dura mater

Changes for: right testicular artery

Changes for: obsolete round ligament

Changes for: superior mesenteric artery

Changes for: renal artery

Changes for: inferior mesenteric artery

Changes for: sinovaginal bulb

Changes for: vaginal plate

Changes for: mucosa of stomach

Changes for: superior suprarenal artery

Changes for: ileocolic artery

Changes for: middle colic artery

Changes for: inferior pancreaticoduodenal artery

Changes for: splenic artery

Changes for: hepatic artery

Changes for: left gastric artery

Changes for: common iliac artery

Changes for: ovarian artery

Changes for: teres minor muscle

Changes for: pseudostratified columnar epithelium

Changes for: pseudostratified ciliated columnar epithelium

Changes for: pharyngeal membrane of 1st arch

Changes for: pharyngeal membrane

Changes for: pharyngeal membrane of 4th arch

Changes for: pharyngeal membrane of 2nd arch

Changes for: pharyngeal membrane of 3rd arch

Changes for: lateral cervical nucleus

Changes for: intermediolateral nucleus

Changes for: left main bronchus

Changes for: right main bronchus

Changes for: lateral funiculus of spinal cord

Changes for: upper lobe of right lung

Changes for: lower lobe of right lung

Changes for: middle lobe of right lung

Changes for: pulmonary alveolar duct

Changes for: respiratory bronchiole

Changes for: terminal bronchiole

Changes for: zygomaticus muscle

Changes for: bronchiole

Changes for: substantia gelatinosa

Changes for: ventral funiculus of spinal cord

Changes for: bronchus

Changes for: segmental bronchus

Changes for: lobar bronchus

Changes for: main bronchus

Changes for: principal inferior olivary nucleus

Changes for: nucleus raphe pallidus

Changes for: medial accessory inferior olivary nucleus

Changes for: lateral reticular nucleus

Changes for: fastigial nucleus

Changes for: flat bone

Changes for: nucleus raphe magnus

Changes for: gigantocellular nucleus

Changes for: superior cerebellar peduncle

Changes for: middle cerebellar peduncle

Changes for: pontine nuclear group

Changes for: alveolar sac

Changes for: left lung

Changes for: right lung

Changes for: endocardium

Changes for: barrel cortex

Changes for: tectobulbar tract

Changes for: inferior cerebellar peduncle

Changes for: area postrema

Changes for: gracile nucleus

Changes for: nucleus prepositus

Changes for: cerebellar nuclear complex

Changes for: anterior lobe of cerebellum

Changes for: vas deferens

Changes for: dentate nucleus

Changes for: tricuspid valve

Changes for: respiratory airway

Changes for: mitral valve

Changes for: respiratory system

Changes for: hilus of dentate gyrus

Changes for: skin epidermis

Changes for: aortic valve

Changes for: habenulo-interpeduncular tract

Changes for: renal system

Changes for: subcommissural organ

Changes for: digestive system

Changes for: parabigeminal nucleus

Changes for: parvocellular oculomotor nucleus

Changes for: peripeduncular nucleus

Changes for: interpeduncular nucleus

Changes for: pedunculopontine tegmental nucleus

Changes for: dorsal tegmental nucleus

Changes for: locus ceruleus

Changes for: adipose tissue

Changes for: superior salivatory nucleus

Changes for: nervous system

Changes for: pulmonary valve

Changes for: musculature

Changes for: reticulotegmental nucleus

Changes for: central nervous system

Changes for: nerve fasciculus

Changes for: teres muscle

Changes for: kidney

Changes for: duodenum

Changes for: jejunum

Changes for: ileum

Changes for: gallbladder

Changes for: artery smooth muscle tissue

Changes for: right ovary

Changes for: left ovary

Changes for: inferior olivary complex

Changes for: medulla of thymus

Changes for: lobule of thymus

Changes for: capsule of thymus

Changes for: cortex of thymus

Changes for: pronephros

Changes for: cerebellar cortex

Changes for: superior olivary complex

Changes for: chordate pharynx

Changes for: esophagus

Changes for: nail plate

Changes for: salivary gland

Changes for: midgut

Changes for: hindgut

Changes for: primordium

Changes for: chin

Changes for: neural tube

Changes for: yolk sac

Changes for: foregut

Changes for: spleen

Changes for: liver

Changes for: small intestine

Changes for: limb

Changes for: trunk

Changes for: hindlimb

Changes for: forelimb

Changes for: visual system

Changes for: hypopharynx

Changes for: rectum

Changes for: obsolete synapse

Changes for: nervous system commissure

Changes for: nerve

Changes for: obsolete dendrite

Changes for: pedal digit 7 digitopodial skeleton

Changes for: pedal digit 8 digitopodial skeleton

Changes for: strand of hair

Changes for: gustatory system

Changes for: neurilemma

Changes for: sensory system

Changes for: skin of trunk

Changes for: skin of head

Changes for: ocular angle artery

Changes for: pleural fluid

Changes for: sweat

Changes for: urine

Changes for: spleen trabecular vein

Changes for: vertebral bone 1

Changes for: calcareous tooth

Changes for: synovial fluid

Changes for: sacral vertebra

Changes for: vertebral bone 2

Changes for: subcostal vein

Changes for: incisor tooth

Changes for: axillary lymph node

Changes for: flocculus

Changes for: anatomical entity

Changes for: head of pancreas

Changes for: parotid duct

Changes for: ventral pancreatic duct

Changes for: vertebral arch joint

Changes for: intervertebral disk

Changes for: pericardial cavity

Changes for: inferior vena cava

Changes for: superficial cervical artery

Changes for: external carotid artery

Changes for: pedicle of vertebra

Changes for: bony vertebral centrum

Changes for: retrosplenial granular cortex

Changes for: genu of facial nerve

Changes for: tibialis

Changes for: cerebellopontine angle

Changes for: proisocortex

Changes for: tooth bud

Changes for: periodontal ligament

  • Deleted
    • - periodontal ligament external definition The fibrous connective tissue that surrounds the root of a tooth, separating it from and attaching it to the alveolar bone. It extends from the base of the gingival mucosa to the fundus of the bony socket, and its main function is to hold the tooth in its socket[BTO]. It consist of cells, extracellular compartment of fibers. The cells are fibroblast, epithelial, undifferentiated mesenchymal cells, bone and cementum cells. The extracellular compartment consists of collagen fibers bundles embedded in ground substance. The PDL substance has been estimated to be 70% water and is thought to have a significant effect on the tooth’s ability to withstand stress loads[WP][BTO:0001020, Wikipedia:Periodontal_fiber, http://purl.obolibrary.org/obo/uberon/tracker/21]. { source=http://en.wikipedia.org/wiki/Periodontal_fiber }
  • Added
    • + periodontal ligament external definition The fibrous connective tissue that surrounds the root of a tooth, separating it from and attaching it to the alveolar bone. It extends from the base of the gingival mucosa to the fundus of the bony socket, and its main function is to hold the tooth in its socket[BTO]. It consist of cells, extracellular compartment of fibers. The cells are fibroblast, epithelial, undifferentiated mesenchymal cells, bone and cementum cells. The extracellular compartment consists of collagen fibers bundles embedded in ground substance. The PDL substance has been estimated to be 70% water and is thought to have a significant effect on the tooth’s ability to withstand stress loads[WP][BTO:0001020, http://en.wikipedia.org/wiki/Periodontal_fiber, http://purl.obolibrary.org/obo/uberon/tracker/21]. { source=http://en.wikipedia.org/wiki/Periodontal_fiber }

Changes for: perivascular space

Changes for: parametrium

Changes for: spleen trabecular artery

Changes for: spleen marginal sinus

Changes for: tibial vein

Changes for: uncinate process of pancreas

Changes for: forehead

Changes for: subiculum

Changes for: ventricular system choroidal fissure

Changes for: trabecula of lymph node

Changes for: adenohypophysis

Changes for: capsule of lymph node

Changes for: median eminence of neurohypophysis

Changes for: neurohypophysis

Changes for: cranial cavity

Changes for: lateral globus pallidus

Changes for: medial globus pallidus

Changes for: dorsal lateral geniculate nucleus

Changes for: otic capsule pre-cartilage condensation

Changes for: cerebellar peduncular complex

Changes for: autopod region

Changes for: helix

Changes for: prostate duct

Changes for: glottis

Changes for: bone tissue

Changes for: ventral lateral geniculate nucleus

Changes for: odontoid tissue

Changes for: papillary muscle of heart

Changes for: long bone

Changes for: acromion

Changes for: pulmonary lobule

Changes for: cochlear labyrinth

Changes for: primary ossification center

Changes for: spheno-maxillary fossa

Changes for: anterior nucleus of hypothalamus anterior part

Changes for: palpebral bone

  • Deleted
    • - palpebral bone comment Taxon notes: The most extreme development of the palpebral is found in the armored dino- saur Euoplocephalus tutus, where the bone forms a quarter-sphere and adducts to completely occlude the or- bit (Coombs, 1972; Vickaryous and Russell, 2003). Notwithstanding the superficially similar position, palpe- brals and tarsal plates differ both anatomically and developmentally and are not considered homologous (Gauthier et al., 1988). Editor notes PMID:16496288 says ‘invests’ the eyelid, is this consistent across taxa?
  • Added
    • + palpebral bone comment Taxon notes: The most extreme development of the palpebral is found in the armored dino- saur Euoplocephalus tutus, where the bone forms a quarter-sphere and adducts to completely occlude the or- bit (Coombs, 1972; Vickaryous and Russell, 2003). Notwithstanding the superficially similar position, palpe- brals and tarsal plates differ both anatomically and developmentally and are not considered homologous (Gauthier et al., 1988). Editor notes http://www.ncbi.nlm.nih.gov/pubmed/16496288 says ‘invests’ the eyelid, is this consistent across taxa?

Changes for: bulbar conjunctiva

Changes for: CA3 alveus

Changes for: CA1 alveus

Changes for: middle part of esophagus

Changes for: upper esophagus

Changes for: lower esophagus

Changes for: cecal tonsil

Changes for: tuberomammillary nucleus dorsal part

Changes for: anterior nucleus of hypothalamus dorsal part

Changes for: anterior nucleus of hypothalamus posterior part

Changes for: anterior nucleus of hypothalamus central part

Changes for: paraventricular nucleus of the hypothalamus descending division - lateral parvicellular part

Changes for: paraventricular nucleus of the hypothalamus descending division - dorsal parvicellular part

Changes for: temporal fossa

Changes for: paraventricular nucleus of the hypothalamus descending division - medial parvicellular part, ventral zone

Changes for: tuberomammillary nucleus ventral part

Changes for: paraventricular nucleus of the hypothalamus magnocellular division - anterior magnocellular part

Changes for: zygomatic fossa

Changes for: paraventricular nucleus of the hypothalamus descending division - forniceal part

Changes for: pyramidal layer of CA2

Changes for: pyramidal layer of CA1

Changes for: sacral spinal cord central canal

Changes for: lumbar spinal cord central canal

Changes for: frontomarginal sulcus

Changes for: thoracic spinal cord central canal

Changes for: cervical spinal cord central canal

Changes for: lamina of cerebellum

Changes for: parietal pleura

Changes for: visceral pleura

Changes for: pleural cavity

Changes for: periamygdaloid cortex

Changes for: precommissural fornix of forebrain

Changes for: subdivision of spinal cord central canal

Changes for: external medullary lamina of thalamus

Changes for: epidermal ridge of digit

Changes for: parietal serous pericardium

Changes for: pericardium

Changes for: transversus thoracis

Changes for: internal intercostal muscle

Changes for: immune system

Changes for: vertebra

Changes for: cervical vertebra

Changes for: autonomic nervous system

Changes for: clitoris

Changes for: dorsal tegmental nucleus pars ventralis

Changes for: dorsal tegmental nucleus pars dorsalis

Changes for: integumental system

Changes for: lumbar vertebra

Changes for: CA3 stratum lucidum

Changes for: cartilage tissue

Changes for: hippocampal formation

Changes for: fourth ventricle

Changes for: hepatobiliary system

Changes for: oral epithelium

Changes for: CA3 stratum lacunosum moleculare

Changes for: CA2 stratum lacunosum moleculare

Changes for: pyramidal layer of CA3

Changes for: CA2 stratum oriens

Changes for: CA1 stratum oriens

Changes for: CA3 stratum oriens

Changes for: CA1 stratum radiatum

Changes for: CA2 stratum radiatum

Changes for: CA3 stratum radiatum

Changes for: CA1 stratum lacunosum moleculare

Changes for: limb bone

Changes for: arm skin

Changes for: cervical lymph node

Changes for: distal interphalangeal joint of digit 3

Changes for: striatum

Changes for: pituitary stalk

Changes for: pars intermedia of adenohypophysis

Changes for: lateral hypothalamic area

Changes for: ventral tegmental nucleus

Changes for: myenteric nerve plexus

Changes for: primary visual cortex

Changes for: cerebral hemisphere white matter

Changes for: lens fiber

Changes for: patella

Changes for: ulnare

Changes for: inferior cervical ganglion

Changes for: palatine gland

Changes for: fungiform papilla

Changes for: posterior limb of internal capsule

Changes for: extreme capsule

  • Deleted
    • - extreme capsule database cross reference NIF_GrossAnatomy:nlx_anat_1010014
    • - extreme capsule database cross reference NeuroNames:254
    • - extreme capsule external definition The extreme capsule is a long association fiber pathway of white matter in the brain that provides bidirectional communication between such areas as the claustrum and the insular cortex, and the inferior frontal gyrus and the middle-posterior portion of the superior temporal gyrus. Its fibers are near to but can be distinguished by MRI tractography from adjacent fiber bundles such as the uncinate fasciculus, the external capsule, the arcuate fascicle, and the medial, inferior and superior longitudinal fascicles. Given its bidirectional connection between the Broca’s and Werniche’s speech areas it could have a role in language[Wikipedia:Extreme_capsule, Wikipedia:Extreme_capsule]. { source=Wikipedia:Extreme_capsule, Wikipedia:Extreme_capsule }
  • Added

Changes for: anterior limb of internal capsule

Changes for: lenticular fasciculus

Changes for: ethmoid sinus

Changes for: uterine gland

Changes for: decidua

Changes for: internal thoracic artery

Changes for: dorsal metacarpal artery

Changes for: spinal artery

Changes for: inferior palpebral vein

Changes for: anterodorsal nucleus of medial geniculate body

Changes for: erector spinae muscle group

Changes for: anterior abdominal wall muscle

Changes for: hamstring muscle

Changes for: intestine secretion

Changes for: lymphoid system

Changes for: foliate papilla

Changes for: filiform papilla

Changes for: esophagus mucosa

Changes for: somatosensory system

Changes for: paraventricular nucleus of the hypothalamus magnocellular division - medial magnocellular part

Changes for: paraventricular nucleus of the hypothalamus magnocellular division - posterior magnocellular part

Changes for: thoracic spinal cord lateral horn

Changes for: infundibular stem

Changes for: thoracic spinal cord dorsal horn

Changes for: inferior occipital gyrus

Changes for: paraventricular nucleus of the hypothalamus magnocellular division

Changes for: paraventricular nucleus of the hypothalamus descending division

Changes for: fundus striati

Changes for: paraventricular nucleus of the hypothalamus parvicellular division

Changes for: celiac lymph node

Changes for: mesenteric lymph node

Changes for: lesser trochanter

Changes for: round window of inner ear

Changes for: greater trochanter

Changes for: oval window

Changes for: zygomatic arch

Changes for: episcleral layer of eyeball

Changes for: scleral mesenchyme

  • Deleted
    • - scleral mesenchyme comment Development notes: The mesenchyme surrounding the developing optic cup differentiates into the sclera, the dense fibrous coat of the eye.. PMID:16496288
  • Added
    • + scleral mesenchyme comment Development notes: The mesenchyme surrounding the developing optic cup differentiates into the sclera, the dense fibrous coat of the eye.. http://www.ncbi.nlm.nih.gov/pubmed/16496288

Changes for: substantia propria of sclera

Changes for: axilla

Changes for: dorsum of tongue

Changes for: anterior meningeal artery

Changes for: cingulum of brain

Changes for: pterygopalatine ganglion

Changes for: thoracic vertebra pre-cartilage condensation

Changes for: fourth ventricle median aperture

Changes for: fourth ventricle lateral aperture

Changes for: interventricular foramen of CNS

Changes for: cloacal sphincter

Changes for: primordial ovarian follicle

Changes for: cerebellum fissure

Changes for: medulla oblongata anterior median fissure

Changes for: Hassall’s corpuscle

Changes for: scleral cartilage

  • Deleted
    • - scleral cartilage comment Taxon notes: May be calcified in chondrichthyans. Tetrapods without this element (e.g., snakes and mammals) have a collagenous sclera. May not be homologous - see PMID:17051547. cup-shaped in birds. Present in monotremes. Editor notes: consider distinguishing cup from predecessor of ossicle. Hall: The scleral cartilaginous cup is a distinctly sepa- rate element composed of hyaline cartilage. Editors notes: relationship to sclera - overlaps?
  • Added
    • + scleral cartilage comment Taxon notes: May be calcified in chondrichthyans. Tetrapods without this element (e.g., snakes and mammals) have a collagenous sclera. May not be homologous - see http://www.ncbi.nlm.nih.gov/pubmed/17051547. cup-shaped in birds. Present in monotremes. Editor notes: consider distinguishing cup from predecessor of ossicle. Hall: The scleral cartilaginous cup is a distinctly sepa- rate element composed of hyaline cartilage. Editors notes: relationship to sclera - overlaps?

Changes for: lumbar vertebra pre-cartilage condensation

Changes for: fourth lumbar dorsal root ganglion

Changes for: zygomatic gland

Changes for: Brodmann (1909) area 21

Changes for: Brodmann (1909) area 20

Changes for: Brodmann (1909) area 19

Changes for: Brodmann (1909) area 25

Changes for: Brodmann (1909) area 23

Changes for: Brodmann (1909) area 22

Changes for: Brodmann (1909) area 28

Changes for: Brodmann (1909) area 27

Changes for: thymus

Changes for: bone marrow

Changes for: tonsil

Changes for: palatine tonsil

Changes for: metacarpal bone

Changes for: cricoid cartilage

Changes for: cerebellum anterior vermis

Changes for: muscle of neck

Changes for: muscle of abdomen

Changes for: perineal muscle

Changes for: posterior meningeal artery

Changes for: rete testis

Changes for: Brodmann (1909) area 10

Changes for: Brodmann (1909) area 9

Changes for: Brodmann (1909) area 12

Changes for: Brodmann (1909) area 14

Changes for: Brodmann (1909) area 13

Changes for: Brodmann (1909) area 15

Changes for: Brodmann (1909) area 16

Changes for: rectus abdominis muscle

Changes for: supraspinatus muscle

Changes for: trapezius muscle

Changes for: pectoralis major

Changes for: forelimb zeugopod

Changes for: pes

Changes for: ocular fundus

Changes for: connective tissue

Changes for: muscle tissue

Changes for: spiral colon

Changes for: manual digit

Changes for: pancreatic epithelial bud

Changes for: gut epithelium

Changes for: Brodmann (1909) area 2

Changes for: retrosplenial region

Changes for: Brodmann (1909) area 8

Changes for: Brodmann (1909) area 7

Changes for: Brodmann (1909) area 4

Changes for: pelvis

Changes for: perineum

Changes for: peritoneum

Changes for: sinoatrial node

Changes for: ruminant esophageal groove

Changes for: atrioventricular node

Changes for: atrioventricular bundle

Changes for: purkinje fiber

Changes for: transverse gyrus of Heschl

Changes for: meninx

Changes for: Brodmann (1909) area 11

Changes for: pia mater

Changes for: Brodmann area

Changes for: endocrine gland

Changes for: adrenal gland

Changes for: bulbo-urethral gland

Changes for: prostate gland

Changes for: tympanic membrane

Changes for: exocrine gland

Changes for: arachnoid mater

Changes for: dura mater

Changes for: dorsal accessory nucleus of optic tract

Changes for: cardiac jelly

Changes for: retinal neural layer

Changes for: nictitating membrane

Changes for: koniocortex

Changes for: choroid plexus epithelium

Changes for: Brodmann (1909) area 40

Changes for: lesser omentum

Changes for: vomer

Changes for: talus

Changes for: manus

Changes for: maxilla

Changes for: nasolacrimal duct

Changes for: lymph

Changes for: bile duct

Changes for: pharyngotympanic tube

Changes for: hematopoietic system

Changes for: posterior choroidal artery

Changes for: Brodmann (1909) area 32

Changes for: anterior choroidal artery

Changes for: Brodmann (1909) area 43

Changes for: Brodmann (1909) area 8a

Changes for: distal interphalangeal joint of digit 5

Changes for: middle temporal sulcus

Changes for: temporal sulcus

Changes for: distal interphalangeal joint of digit 4

Changes for: juxtaglomerular apparatus

Changes for: layer of hippocampus

Changes for: choroid plexus of lateral ventricle

Changes for: nasal mucus

Changes for: medial longitudinal fasciculus

Changes for: nucleus of brain

Changes for: distal interphalangeal joint of digit 2

Changes for: periventricular nucleus of hypothalamus

Changes for: umbilical cord

Changes for: exocrine system

Changes for: corpus callosum

Changes for: macula densa

Changes for: submandibular duct

Changes for: hemisphere part of cerebellar posterior lobe

Changes for: white matter of medulla oblongata

Changes for: hemisphere part of cerebellar anterior lobe

Changes for: terminal nerve root

Changes for: occipital gyrus

Changes for: cerebrocerebellum

Changes for: endometrial stroma

Changes for: lamina propria of bronchus

Changes for: neural crest

Changes for: thoracic vertebra

Changes for: neurectoderm

Changes for: dorsal nerve root of cervical spinal cord

Changes for: thoracic spinal cord gray matter

Changes for: thoracic spinal cord white matter

Changes for: lumbar spinal cord dorsal horn

Changes for: frontal sulcus

Changes for: ventral gray commissure of spinal cord

Changes for: apex of lumbar spinal cord dorsal horn

Changes for: dorsal gray commissure of spinal cord

Changes for: ventral nerve root of cervical spinal cord

Changes for: substantia gelatinosa of lumbar spinal cord dorsal horn

Changes for: epicardium

Changes for: myocardium

Changes for: midbrain tectum

Changes for: hippocampus pyramidal layer

Changes for: hippocampus fimbria

Changes for: vestibular fissure of the cochlear canal

Changes for: terminal part of the cochlear canal

Changes for: base of cochlear canal

Changes for: basis modioli

Changes for: substantia gelatinosa of cervical spinal cord dorsal horn

Changes for: apex of cervical spinal cord dorsal horn

Changes for: cervical spinal cord ventral horn

Changes for: cervical spinal cord dorsal horn

Changes for: mesangium

Changes for: white matter of cerebellum

Changes for: white matter of spinal cord

Changes for: gray matter of spinal cord

Changes for: white matter

Changes for: coelemic cavity lumen

Changes for: epithelium of urethra

Changes for: ventral nerve root of thoracic spinal cord

Changes for: middle frontal sulcus

Changes for: cervical spinal cord lateral horn

Changes for: cervical spinal cord gray matter

Changes for: cervical spinal cord white matter

Changes for: accessory nerve root

Changes for: dorsal nerve root of thoracic spinal cord

Changes for: thoracic spinal cord ventral horn

Changes for: substantia gelatinosa of thoracic spinal cord dorsal horn

Changes for: apex of thoracic spinal cord dorsal horn

Changes for: notochord

Changes for: somite

Changes for: interlobular duct

Changes for: intercalated duct of salivary gland

Changes for: striated duct of salivary gland

Changes for: intercalated duct of pancreas

Changes for: intercalated duct

Changes for: irregular bone

Changes for: sulcus limitans of fourth ventricle

Changes for: nail of pedal digit

Changes for: trunk region of vertebral column

Changes for: nail of manual digit

Changes for: Mullerian duct

Changes for: stroma

Changes for: liver primordium

Changes for: nutrient foramen artery

Changes for: intraembryonic coelom

Changes for: CA4 field of hippocampus

Changes for: CA3 field of hippocampus

Changes for: CA2 field of hippocampus

Changes for: CA1 field of hippocampus

Changes for: rete ovarii

Changes for: male urethral gland

Changes for: extraembryonic coelom

Changes for: fallopian tube

Changes for: neural arch

Changes for: middle phalanx of manus

Changes for: distal phalanx of manus

Changes for: pedal digit 4 phalanx

Changes for: pedal digit 5 phalanx

Changes for: prostate gland lateral lobe

Changes for: short bone

Changes for: proximal phalanx of pes

Changes for: eyebrow

Changes for: distal phalanx of pes

Changes for: coat of hair

Changes for: inferior olive medial accessory nucleus

Changes for: medial accessory nucleus of optic tract

Changes for: inferior olive dorsal accessory nucleus

Changes for: lateral accessory nucleus of optic tract

Changes for: secretory circumventricular organ

Changes for: dental epithelium

Changes for: paraurethral gland

Changes for: seminal vesicle fluid

Changes for: thyroid artery

Changes for: thymus epithelium

Changes for: psoas muscle

Changes for: abomasum

Changes for: cremaster muscle

Changes for: sputum

Changes for: saphenous vein

Changes for: rumen

Changes for: omasum

Changes for: ruminant reticulum

Changes for: egg yolk

Changes for: intertarsal joint

Changes for: auditory hillocks

Changes for: conchal part of pinna

Changes for: exoccipital pre-cartilage condensation

Changes for: cloacal membrane

Changes for: spleen germinal center

Changes for: ethmoidal artery

Changes for: thoracic vein

Changes for: iliac pre-cartilage condensation

Changes for: nasolacrimal groove

Changes for: Meckel’s cartilage pre-cartilage condensation

Changes for: notochordal plate

Changes for: notochordal process

Changes for: infundibular recess of 3rd ventricle

Changes for: ischial pre-cartilage condensation

Changes for: laryngotracheal groove

Changes for: lens pit

Changes for: pyramid of medulla oblongata

Changes for: pubic pre-cartilage condensation

Changes for: future cardiac ventricle

Changes for: scapula pre-cartilage condensation

Changes for: pleuropericardial folds

Changes for: pericardio-peritoneal canal

Changes for: otic pit

Changes for: hepatic duct

Changes for: sternebral bone pre-cartilage condensation

Changes for: ascending limb of loop of Henle

Changes for: subcardinal vein

Changes for: metanephric nephron

Changes for: late embryonic stage

Changes for: late adult stage

Changes for: medial entorhinal cortex

Changes for: lateral entorhinal cortex

Changes for: superior vestibular nucleus

Changes for: vestibular nucleus

Changes for: lateral vestibular nucleus

Changes for: tunica media of artery

Changes for: hilum of inferior olivary complex

Changes for: plantar part of pes

Changes for: inguinal part of abdomen

Changes for: ventrolateral sulcus of medulla oblongata

Changes for: cerebellum posterior vermis

Changes for: cerebellum intermediate zone

Changes for: cerebellar plate

Changes for: olfactory bulb layer

Changes for: posterior lobe of cerebellum

Changes for: cerebellum lobule

Changes for: upper esophageal sphincter

Changes for: dorsal accessory inferior olivary nucleus

Changes for: superior olivary nucleus

Changes for: lingual tonsil

Changes for: Brodmann (1909) area 24

Changes for: Brodmann (1909) area 3

Changes for: obsolete basis modioli

Changes for: Brodmann (1909) area 36

Changes for: Brodmann (1909) area 35

Changes for: corticomedial nuclear complex

Changes for: basolateral amygdaloid nuclear complex

Changes for: cochlear canal

Changes for: odontoid process of cervical vertebra 2

Changes for: myelinated nerve fiber

Changes for: unmyelinated nerve fiber

Changes for: funiculus of spinal cord

Changes for: vertical limb of the diagonal band

Changes for: subdivision of diagonal band

Changes for: obsolete retrorubral area

Changes for: horizontal limb of the diagonal band

Changes for: superior colliculus superficial gray layer

Changes for: lamina terminalis of neural tube

Changes for: hemispheric lobule VIII

Changes for: accessory nerve fiber bundle

Changes for: lamina I of gray matter of spinal cord

Changes for: subbrachial nucleus

Changes for: lateral occipital cortex

Changes for: posterior column of fornix

Changes for: vagal nerve fiber bundle

Changes for: neural fold

Changes for: neural groove

Changes for: pontine cistern

Changes for: gizzard

Changes for: basal cistern

Changes for: cerebellomedullary cistern

Changes for: canal of Schlemm

Changes for: mucosa of upper lip

Changes for: mucosa of lower lip

Changes for: chorionic plate

Changes for: dermatome

Changes for: golgi tendon organ

Changes for: labium minora

Changes for: cerebellum vermis lobule X

Changes for: genital labium

Changes for: cerebellum vermis lobule VII

Changes for: cerebellum vermis lobule VIII

Changes for: vena cava

Changes for: labium majora

Changes for: brain ventricle

Changes for: cerebellum vermis lobule

Changes for: cerebellum vermis lobule I

Changes for: cerebellum vermis lobule II

Changes for: cerebellum vermis lobule III

Changes for: cerebellum vermis lobule IV

Changes for: cerebellum vermis lobule IX

Changes for: cerebellum vermis lobule V

Changes for: cerebellum vermis lobule VI

Changes for: frontonasal prominence

Changes for: neural tube basal plate

Changes for: neural tube mantle layer

Changes for: neural tube marginal layer

Changes for: accessory olfactory bulb

Changes for: quadrigeminal cistern

Changes for: primitive pit

Changes for: subarachnoid cistern

Changes for: posterior auricular vein

Changes for: auricular vein

Changes for: primitive groove

Changes for: alveolar ridge

Changes for: crus of ear

Changes for: clivus of occipital bone

Changes for: pharyngeal pouch

Changes for: anatomical conduit

Changes for: muscle of middle ear

Changes for: optic vesicle

  • Deleted
    • - optic vesicle comment Genes: Six3, Pax6, Rx1 are expressed together in the tip of the neural plate [ISBN:9780878932504 “Developmental Biology”]. Development notes: During subsequent develop- ment, the optic vesicle invaginates and becomes a two-layered structure with an inner neural retina and outer retinal pigment epithelium. As soon as the developing optic vesicle makes contact with the overlying ectoderm, it induces the ectoderm to thicken and form the lens placode PMID:16496288
    • - optic vesicle database cross reference ncithesaurus:Optic_Vesicle
  • Added
    • + optic vesicle comment Genes: Six3, Pax6, Rx1 are expressed together in the tip of the neural plate [ISBN:9780878932504 “Developmental Biology”]. Development notes: During subsequent develop- ment, the optic vesicle invaginates and becomes a two-layered structure with an inner neural retina and outer retinal pigment epithelium. As soon as the developing optic vesicle makes contact with the overlying ectoderm, it induces the ectoderm to thicken and form the lens placode http://www.ncbi.nlm.nih.gov/pubmed/16496288
    • + optic vesicle database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Optic_Vesicle

Changes for: genitourinary system

Changes for: chorionic villus

Changes for: vernix caseosa

Changes for: meconium

Changes for: deciduous tooth

Changes for: umbilicus

Changes for: neck of femur

Changes for: Douglas’ pouch

Changes for: pharyngeal pouch 3

Changes for: pharyngeal pouch 2

  • Deleted
  • Added
    • + pharyngeal pouch 2 comment Development notes: Contributes to the middle ear, epithelial lining of Crypts (spaces) of the palatine tonsils, supplied by the facial nerve[WP] the dorsal elongation of the second pouch endoderm of all mammals, with the exception of rodents, gives rise to the epithelial lining of palatine tonsils; in rodents, the ventral portion of the second pouch appears to degenerate whereas the remaining part is incorporated into the lateral border of the pharynx; it appears that rodents no longer require tonsils as their function is carried out by the NALT (Nose/Nasal-Associated Lymphoid Tissue) system in the upper respiratory tract.
    • + pharyngeal pouch 2 database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Second_Pharyngeal_Pouch

Changes for: pharyngeal pouch 1

Changes for: premolar tooth

Changes for: pharyngeal pouch 5

Changes for: pharyngeal pouch 4

Changes for: posterior spinal artery

Changes for: inferior thyroid artery

Changes for: superior thyroid artery

Changes for: inferior sagittal sinus

Changes for: inferior epigastric vein

Changes for: scalene muscle

Changes for: muscle of pelvic diaphragm

Changes for: medial border of scapula

  • Deleted
    • - medial border of scapula comment Consider merging with UBERON:1500000 scapular blade, depending on https://github.com/obophenotype/uberon/issues/339. See also PMID:20136669
  • Added
    • + medial border of scapula comment Consider merging with UBERON:1500000 scapular blade, depending on https://github.com/obophenotype/uberon/issues/339. See also http://www.ncbi.nlm.nih.gov/pubmed/20136669

Changes for: orbital gyrus

Changes for: posterior paracentral gyrus

Changes for: anterior paracentral gyrus

Changes for: paracentral gyrus

Changes for: vesicular gland

Changes for: Brodmann (1909) area 48

Changes for: Brodmann (1909) area 52

Changes for: Brodmann (1909) area 46

Changes for: Brodmann (1909) area 47

Changes for: Brodmann (1909) area 44

Changes for: Brodmann (1909) area 45

Changes for: Brodmann (1909) area 39

Changes for: second cervical spinal cord segment

Changes for: hadjikhani et al. (1998) visuotopic area v2d

Changes for: third cervical spinal cord segment

Changes for: Brodmann (1909) area 6

Changes for: Brodmann (1909) area 18

Changes for: Brodmann (1909) area 30

Changes for: Brodmann (1909) area 31

Changes for: eighth cervical spinal cord segment

Changes for: Brodmann (1909) area 5

Changes for: Brodmann (1909) area 33

Changes for: Brodmann (1909) area 34

Changes for: Brodmann (1909) area 37

Changes for: Brodmann (1909) area 38

Changes for: fourth cervical spinal cord segment

Changes for: fifth cervical spinal cord segment

Changes for: sixth cervical spinal cord segment

Changes for: seventh cervical spinal cord segment

Changes for: interosseous muscle of pes

Changes for: dorsal pes interosseous muscle

Changes for: third lumbar spinal cord segment

Changes for: first lumbar spinal cord segment

Changes for: fifth lumbar spinal cord segment

Changes for: rostral middle frontal gyrus

Changes for: caudal middle frontal gyrus

Changes for: twelfth thoracic spinal cord segment

Changes for: eleventh thoracic spinal cord segment

Changes for: tenth thoracic spinal cord segment

Changes for: ninth thoracic spinal cord segment

Changes for: first cervical spinal cord segment

Changes for: first sacral spinal cord segment

Changes for: fifth sacral spinal cord segment

Changes for: fourth sacral spinal cord segment

Changes for: third sacral spinal cord segment

Changes for: second sacral spinal cord segment

Changes for: seventh thoracic spinal cord segment

Changes for: sixth thoracic spinal cord segment

Changes for: first thoracic spinal cord segment

Changes for: eighth thoracic spinal cord segment

Changes for: third thoracic spinal cord segment

Changes for: second thoracic spinal cord segment

Changes for: fourth lumbar spinal cord segment

Changes for: second lumbar spinal cord segment

Changes for: fifth thoracic spinal cord segment

Changes for: fourth thoracic spinal cord segment

Changes for: olfactory bulb mitral cell layer

Changes for: Harderian gland

Changes for: prostate gland stroma

Changes for: aorta smooth muscle tissue

Changes for: medulla reticulospinal tract

Changes for: spinal cord ventral commissure

Changes for: trigeminothalamic tract

Changes for: long nephron

Changes for: heart tube

Changes for: cardiac vein

Changes for: cerebellar layer

Changes for: septum transversum

Changes for: orbitofrontal cortex

Changes for: atrial septum primum

Changes for: atrial septum secundum

Changes for: blood vessel smooth muscle

Changes for: lymphatic vessel smooth muscle

Changes for: gall bladder smooth muscle

Changes for: bronchus smooth muscle

Changes for: glomerular capillary

Changes for: intestine smooth muscle

Changes for: cardiac septum

Changes for: zygomaticus minor muscle

Changes for: apex of heart

Changes for: zygomaticus major muscle

Changes for: appendicular skeleton

Changes for: spinal dura mater

Changes for: brain dura mater

Changes for: mesentery

Changes for: interventricular septum

Changes for: skin of body

Changes for: kidney pyramid

Changes for: thyro-arytenoid

Changes for: left cardiac atrium

Changes for: right cardiac atrium

Changes for: hair follicle

Changes for: hypodermis

Changes for: viscus

Changes for: hair shaft

Changes for: stratum lucidum of epidermis

Changes for: superior pancreaticoduodenal artery

Changes for: vocalis muscle

Changes for: vertical muscle of tongue

Changes for: transverse muscle of tongue

Changes for: atrioventricular canal

Changes for: interatrial septum

Changes for: heart left ventricle

Changes for: ductus venosus

Changes for: cardiac ventricle

Changes for: cardiac atrium

Changes for: heart right ventricle

Changes for: primitive gut

Changes for: sexually immature organism

Changes for: adult organism

Changes for: supracardinal vein

Changes for: cleaving embryo

Changes for: nasal muscle

Changes for: skin of face

Changes for: Zymbal’s gland

Changes for: spleen pulp

Changes for: external iliac lymph node

Changes for: root of nail

Changes for: cymba conchae of pinna

Changes for: internal iliac lymph node

Changes for: gastric lymph node

Changes for: retropharyngeal lymph node

Changes for: epigastric vein

Changes for: pelvic lymph node

Changes for: common iliac lymph node

Changes for: communicating artery

Changes for: stapedial artery

Changes for: epigastric artery

Changes for: anterior lingual gland

Changes for: hepatic lymph node

Changes for: superior oblique extraocular muscle

Changes for: inferior oblique extraocular muscle

Changes for: superior pharyngeal constrictor

Changes for: superior rectus extraocular muscle

Changes for: inferior rectus extraocular muscle

Changes for: orbitalis muscle

Changes for: chamber of eyeball

Changes for: bodily fluid

Changes for: spinal cord reticular nucleus

Changes for: truncus arteriosus

Changes for: sinus venosus

Changes for: common cardinal vein

Changes for: femoral artery

Changes for: stratum granulosum of epidermis

Changes for: posterior cardinal vein

Changes for: umbilical vein

Changes for: dermis

Changes for: urachus

Changes for: capsule of adrenal gland

Changes for: embryonic structure

Changes for: epithelium of bronchiole

Changes for: ciliary ganglion

Changes for: submandibular ganglion

Changes for: inferior suprarenal artery

Changes for: phrenic artery

Changes for: bronchial artery

Changes for: lymphatic vessel endothelium

Changes for: dorsal raphe nucleus

Changes for: ventral nucleus of posterior commissure

Changes for: cuneate nucleus

Changes for: thyroid gland

Changes for: pontine raphe nucleus

Changes for: lung

Changes for: glomerular capillary endothelium

Changes for: dermomyotome

Changes for: nipple

Changes for: epithelium of bronchus

Changes for: suprachiasmatic nucleus

Changes for: medial preoptic nucleus

Changes for: areola

Changes for: substantia nigra

Changes for: striated muscle tissue

Changes for: cerebellum

Changes for: epithelium of gall bladder

Changes for: stratum spinosum of epidermis

Changes for: stratum basale of epidermis

Changes for: hindbrain

Changes for: stratum corneum of epidermis

Changes for: insula

Changes for: occipital lobe

Changes for: internal carotid nerve plexus

Changes for: claustrum of brain

Changes for: gray matter

Changes for: synovial membrane of synovial joint

Changes for: accessory XI nerve

Changes for: portal vein

Changes for: fourth ventricle choroid plexus epithelium

Changes for: pulmonary vein

Changes for: kidney capsule

Changes for: inferior hypogastric nerve plexus

Changes for: pulmonary artery

Changes for: thoracodorsal artery

Changes for: lateral ventricle choroid plexus epithelium

Changes for: cardiac nerve plexus

Changes for: gluteal muscle

Changes for: joint of rib

Changes for: peripheral nerve

Changes for: cortex of lymph node

Changes for: enteric nervous system

Changes for: trabecular network of bone

Changes for: pyloric gastric gland

Changes for: epithelium of mammary gland

Changes for: rectal venous plexus

Changes for: skeletal muscle tissue of tongue

Changes for: osteoid

Changes for: rostral migratory stream

Changes for: pulmonary acinus

Changes for: epidermal-dermal junction

Changes for: palmar part of manus

Changes for: tooth of lower jaw

Changes for: tooth of upper jaw

Changes for: alveolus

Changes for: hard palate

Changes for: neural lobe of neurohypophysis

Changes for: splanchnocranium

Changes for: obsolete articulation

Changes for: taenia tectum of brain

Changes for: phalanx

Changes for: cardinal vein

Changes for: limb bud

Changes for: gubernaculum

Changes for: transduate

Changes for: primitive streak

Changes for: allantois

Changes for: secondary tooth

Changes for: vault of skull

  • Deleted
    • - vault of skull comment Editor notes: We follow PMID:11523816 (Morriss-Kay) in definingenumerating the components of the skull vault. Note that there is a conflict with Kardong; e.g. in fig 7.10, Kardong places the squamosal in the temporal series. We cannot place the vault as entirely part of the dermatocranium as it has a small splanchnocranium contribution and a sclerotomal contribution. Terminology notes. we include calvarium as a synonym, but Gray’s Anatomy’s list includes the Ethmoid and Sphenoid bone in the Calvaria. Some books (and HPO) state that calvaria consists of just the frontal bone, parietal bone, temporal bone, and occipital bone. Note vault may not be precisely equivalent to calvaria
    • - vault of skull database cross reference ncithesaurus:Skullcap
  • Added
    • + vault of skull comment Editor notes: We follow http://www.ncbi.nlm.nih.gov/pubmed/11523816 (Morriss-Kay) in definingenumerating the components of the skull vault. Note that there is a conflict with Kardong; e.g. in fig 7.10, Kardong places the squamosal in the temporal series. We cannot place the vault as entirely part of the dermatocranium as it has a small splanchnocranium contribution and a sclerotomal contribution. Terminology notes. we include calvarium as a synonym, but Gray’s Anatomy’s list includes the Ethmoid and Sphenoid bone in the Calvaria. Some books (and HPO) state that calvaria consists of just the frontal bone, parietal bone, temporal bone, and occipital bone. Note vault may not be precisely equivalent to calvaria
    • + vault of skull database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Skullcap

Changes for: dorsal premammillary nucleus

Changes for: ventral premammillary nucleus

Changes for: cerebellum culmen

Changes for: paramedian reticular nucleus

Changes for: gyrus

Changes for: Descemet’s membrane

Changes for: vascular system

Changes for: pallium

Changes for: cauda epididymis

Changes for: pharyngeal arch artery

Changes for: pharyngeal arch 1

Changes for: tetrapod frontal bone

Changes for: corpus epididymis

Changes for: caput epididymis

Changes for: exudate

Changes for: apical ectodermal ridge

Changes for: interphalangeal joint of manus

Changes for: interphalangeal joint of pes

Changes for: anterior limiting lamina of cornea

Changes for: interphalangeal joint of manual digit 1

Changes for: lateral nucleus of trapezoid body

Changes for: retroambiguus nucleus

Changes for: zygote stage

Changes for: life cycle stage

Changes for: life cycle

Changes for: paratrigeminal nucleus

Changes for: obsolete life cycle stage boundary

Changes for: lobe of lung

Changes for: cell layer

Changes for: lung bud

Changes for: digit 6 plus metapodial segment

Changes for: digit 7 plus metapodial segment

Changes for: digit 8 plus metapodial segment

Changes for: facial nucleus

Changes for: ventral part of optic cup

Changes for: interdigital gland

Changes for: metatarsophalangeal joint of pedal digit 1

Changes for: dorsal part of optic cup

Changes for: skin scent gland

Changes for: nucleus of phrenic nerve

Changes for: epineurium

Changes for: neural nucleus

Changes for: endoneurium

Changes for: blood brain barrier

Changes for: perineurium

Changes for: spinothalamic tract

Changes for: anal canal

Changes for: superior cerebellar peduncle of pons

Changes for: superior cerebellar peduncle of midbrain

Changes for: lateral paragigantocellular nucleus

Changes for: dorsal paragigantocellular nucleus

Changes for: paramedian medullary reticular complex

Changes for: dorsal paramedian reticular nucleus

Changes for: fourth thoracic spinal ganglion

Changes for: fourth sacral spinal ganglion

Changes for: cervical subsegment of spinal cord

Changes for: thoracic subsegment of spinal cord

Changes for: intermediate nucleus of lateral lemniscus

Changes for: sixth cervical dorsal root ganglion

Changes for: oral cavity

Changes for: sacral subsegment of spinal cord

Changes for: lumbar subsegment of spinal cord

Changes for: primitive urogenital sinus

Changes for: cloaca

Changes for: intestine

Changes for: vomit

Changes for: pleural effusion

Changes for: amniotic fluid

Changes for: pus

Changes for: blood

Changes for: sagittal sinus

Changes for: rostrum of corpus callosum

Changes for: lateral lumbar region of abdomen

Changes for: splenium of the corpus callosum

Changes for: coagulating gland

Changes for: stylopharyngeus muscle

Changes for: superior mediastinum

Changes for: pharyngeal slit

Changes for: pharyngeal arch system

Changes for: future nervous system

Changes for: helicotrema

Changes for: forestomach

Changes for: cerebellum external granule cell layer

Changes for: future central nervous system

Changes for: digit 6 digitopodial skeleton

Changes for: digit 8 digitopodial skeleton

Changes for: digit 7 digitopodial skeleton

Changes for: anterior mediastinum

Changes for: gland of diencephalon

Changes for: posterior mediastinum

Changes for: middle mediastinum

Changes for: meninx of hindbrain

Changes for: duct of epididymis

Changes for: meninx of spinal cord

Changes for: neural tube derived brain

Changes for: pulmonary surfactant

Changes for: metapodial pad

Changes for: liver bud

Changes for: hepatic diverticulum

Changes for: cerebellum internal granule cell layer

Changes for: digit 1 plus metapodial segment

Changes for: digit 2 plus metapodial segment

Changes for: smooth muscle of trachea

Changes for: epithelium of tongue

Changes for: rugal fold of stomach

Changes for: mucosa of anal canal

Changes for: posterior cranial fossa

Changes for: inner cell mass derived epiblast

Changes for: digit 3 plus metapodial segment

Changes for: subclavius

Changes for: digit 5 plus metapodial segment

Changes for: digit 4 plus metapodial segment

Changes for: proximal epiphysis of fibula

Changes for: proximal epiphysis of tibia

Changes for: cerebral artery

Changes for: gustatory pore

Changes for: tract of spinal cord

Changes for: late embryo

Changes for: cerebral lobe

Changes for: hair root

Changes for: breast

Changes for: cytotrophoblast

Changes for: amniotic cavity

Changes for: lateral recess of fourth ventricle

Changes for: tendon sheath

Changes for: amnion

Changes for: esophagogastric junction

Changes for: gastric vein

Changes for: thoracic lymph node

Changes for: neurula embryo

Changes for: hippocampus stratum lacunosum moleculare

Changes for: trigeminal nuclear complex

Changes for: magnocellular nucleus of stria terminalis

Changes for: subparaventricular zone

Changes for: lateral septal complex

Changes for: medial septal complex

Changes for: septohippocampal nucleus

Changes for: hippocampus stratum lucidum

Changes for: Barrington’s nucleus

Changes for: accessory olfactory bulb glomerular layer

Changes for: parabrachial nucleus

Changes for: nucleus of trapezoid body

Changes for: hippocampus alveus

Changes for: stratified cuboidal epithelium

Changes for: stratified columnar epithelium

Changes for: tetrapod parietal bone

Changes for: ligament

Changes for: tibial artery

Changes for: extensor digitorum communis

Changes for: extensor digitorum lateralis muscle

Changes for: atlanto-occipital joint

Changes for: hilum of kidney

Changes for: muscle tissue of prostate

Changes for: anatomical projection

Changes for: oral part of ventral posterolateral nucleus

Changes for: lateral pes lemniscus

Changes for: flocculonodular lobe

Changes for: facial motor nucleus

Changes for: alar central lobule

Changes for: postcommissural fornix of brain

Changes for: anterior quadrangular lobule

Changes for: parvicellular part of ventral posteromedial nucleus

Changes for: substantia innominata

Changes for: dorsal longitudinal fasciculus of hypothalamus

Changes for: dorsal tegmental decussation

Changes for: microfilament

Changes for: medial lemniscus

Changes for: lemniscus

Changes for: intermediate filament

Changes for: lateral parabrachial nucleus

Changes for: dorsal nucleus of lateral lemniscus

Changes for: dorsal longitudinal fasciculus of midbrain

Changes for: median raphe nucleus

Changes for: posterior nucleus of thalamus

Changes for: submedial nucleus

Changes for: thoracic spinal cord

Changes for: anterior commissure anterior part

Changes for: central dorsal nucleus

Changes for: suprageniculate nucleus

Changes for: central lateral nucleus

Changes for: regional part of cerebellar white matter

Changes for: central lobule

Changes for: subcallosal area

Changes for: stria terminalis

Changes for: commissure of inferior colliculus

Changes for: cingulate cortex

Changes for: limitans nucleus

Changes for: brachium of inferior colliculus

Changes for: principal part of ventral posteromedial nucleus

Changes for: pontine tegmentum

Changes for: venous system

Changes for: sphincter muscle

Changes for: external capsule

Changes for: decidua capsularis

Changes for: cardiovascular system

Changes for: left testis

Changes for: right testis

Changes for: right kidney

Changes for: left kidney

Changes for: digital vein

Changes for: gastroesophageal sphincter

Changes for: fundus of gallbladder

Changes for: fundus of urinary bladder

Changes for: lumbar region of vertebral column

Changes for: thoracic region of vertebral column

Changes for: genu of corpus callosum

Changes for: cervical region of vertebral column

Changes for: frontal gyrus

Changes for: glossopharyngeal nerve fiber bundle

Changes for: inferior horn of the lateral ventricle

Changes for: cuneus cortex

Changes for: precuneus cortex

Changes for: inferior parietal cortex

Changes for: internal arcuate fiber bundle

Changes for: dorsal external arcuate fiber bundle

Changes for: perirhinal cortex

Changes for: stria medullaris

Changes for: ventral external arcuate fiber bundle

Changes for: posterior transverse temporal area 42

Changes for: anterior transverse temporal area 41

Changes for: superior parietal cortex

Changes for: Brodmann (1909) area 1

Changes for: basal nuclear complex

Changes for: falx cerebri

Changes for: coccygeal vertebra

Changes for: regional part of hypothalamus

Changes for: body of corpus callosum

Changes for: uncinate fasciculus

Changes for: dorsal longitudinal fasciculus

Changes for: ventral acoustic stria

Changes for: regional part of pretectal region

Changes for: central gray substance of midbrain

Changes for: trigeminal nerve fibers

Changes for: posterior part of anterior commissure

Changes for: presomitic mesoderm

Changes for: hypochord

Changes for: periderm

Changes for: cusp of cardiac valve

Changes for: roof plate

Changes for: ear vesicle

Changes for: midbrain-hindbrain boundary

Changes for: hair follicle isthmus

Changes for: pharyngeal arch 2

Changes for: otic placode

Changes for: pronephric duct

Changes for: blood island

Changes for: primitive knot

Changes for: intermediate mesoderm

Changes for: floor plate

Changes for: paraxial mesoderm

Changes for: optic cup

Changes for: neural plate

Changes for: lens placode

Changes for: mesonephric duct

Changes for: heart primordium

Changes for: anterior cardinal vein

Changes for: lateral plate mesoderm

Changes for: myotome

Changes for: sclerotome

Changes for: caudal vein

Changes for: optic stalk

Changes for: ultimobranchial body

  • Deleted
    • - ultimobranchial body comment Developmental origins vary across species. PMID:16313389 says: the most posterior pouch generates the ultimobranchial bodies in most vertebrate classes, but mammals do not contain this structure // The neural crest is the source of ultimobranchial cells[Kardong]. WP says pouch 4, but this isn’t supported by Kardong (table 13.1 or fig 15.5). EHDAA2 says 6th arch mesenchyme
  • Added
    • + ultimobranchial body comment Developmental origins vary across species. http://www.ncbi.nlm.nih.gov/pubmed/16313389 says: the most posterior pouch generates the ultimobranchial bodies in most vertebrate classes, but mammals do not contain this structure // The neural crest is the source of ultimobranchial cells[Kardong]. WP says pouch 4, but this isn’t supported by Kardong (table 13.1 or fig 15.5). EHDAA2 says 6th arch mesenchyme

Changes for: thyroid primordium

Changes for: pharyngeal arch artery 2

Changes for: pharyngeal arch artery 1

Changes for: liver lobule

Changes for: esophagus muscularis mucosa

Changes for: infraorbital artery

Changes for: urinary bladder urothelium

Changes for: fourth ventricle ependyma

Changes for: lateral ventricle ependyma

Changes for: spleen capsule

Changes for: olfactory region

Changes for: thoracic vertebra 12

Changes for: blood vessel endothelium

Changes for: thoracic vertebra 9

Changes for: thoracic vertebra 7

Changes for: thoracic vertebra 11

Changes for: thoracic vertebra 10

Changes for: mesenchyme

Changes for: thoracic vertebra 6

Changes for: thoracic vertebra 5

Changes for: thoracic vertebra 2

Changes for: thoracic vertebra 3

Changes for: sacral vertebra 4

Changes for: thoracic vertebra 1

Changes for: thoracic vertebra 4

Changes for: lumbar vertebra 4

Changes for: sacral vertebra 3

Changes for: sacral vertebra 2

Changes for: sacral vertebra 1

Changes for: lumbar vertebra 5

Changes for: mammalian cervical vertebra 5

Changes for: mammalian cervical vertebra 6

Changes for: mammalian cervical vertebra 7

Changes for: lumbar vertebra 1

Changes for: lumbar vertebra 2

Changes for: lumbar vertebra 3

Changes for: rib 12

Changes for: rib 11

Changes for: mammalian cervical vertebra 4

Changes for: mammalian cervical vertebra 3

Changes for: rib 10

Changes for: rib 9

Changes for: rib 7

Changes for: rib 6

Changes for: rib 5

Changes for: rib 4

Changes for: rib 3

Changes for: rib 1

Changes for: rib 2

Changes for: reproductive organ

Changes for: fascia

Changes for: submocosal esophageal gland

Changes for: skull

Changes for: chorion

Changes for: pharyngeal arch artery 6

Changes for: pharyngeal arch artery 5

Changes for: left colon

Changes for: pharyngeal arch artery 4

Changes for: right colon

Changes for: trachea

Changes for: pes anserinus of tibia

Changes for: pharyngeal arch artery 3

Changes for: decussation of neuraxis

Changes for: nucleus of midbrain reticular formation

Changes for: cerebellar peduncle

Changes for: midbrain raphe nuclei

Changes for: bulbourethral gland secretion

Changes for: pancreaticoduodenal vein

Changes for: Peyer’s patch germinal center

Changes for: vena cava endothelium

Changes for: parasubiculum

Changes for: raphe nuclei

Changes for: middle temporal area

Changes for: gastro-splenic ligament

Changes for: body of fornix

Changes for: vestibular system

Changes for: corona radiata of neuraxis

Changes for: apex of spinal cord dorsal horn

Changes for: dentate gyrus molecular layer

Changes for: spinal cord lateral horn

Changes for: spinal cord gray commissure

Changes for: facial nerve root

Changes for: hypoglossal nerve root

Changes for: posterior horn lateral ventricle

Changes for: trigeminal nerve root

Changes for: ependyma

Changes for: gyrus rectus

Changes for: stratum intermedium of tooth

Changes for: tertiary ovarian follicle

Changes for: lamina propria of trachea

Changes for: lamina propria

Changes for: head

Changes for: follicular fluid

Changes for: ganglion

Changes for: dorsal root ganglion

Changes for: tendon

Changes for: serous membrane

Changes for: sural nerve

Changes for: parasympathetic nervous system

Changes for: peripheral nervous system

Changes for: sympathetic nervous system

Changes for: somatic nervous system

Changes for: endocrine pancreas

Changes for: exocrine pancreas

Changes for: camera-type eye

Changes for: tracheobronchial lymph node

Changes for: cutaneous appendage

  • Deleted
    • - cutaneous appendage comment Examples: hair, nail (FMA); feather, claw, hoof, horn, wattle, spur, beak, scale(?), antler, bristle. Editors note: Mammary glands develop by similar mechanisms, and there is an argument for including them here (e.g. PMID:20484386), but these structures do not fit the current definition (lactiferous glands are part of the integumentary system in FMA). Note the FMA class is a subdivision of epidermis, which may be too restrictive for our purposes here. TODO: revise after definition of appendage is finalized in CARO2; in addition, verify subtypes w.r.t definition - e.g. beaks may overlap with skin of body rather than being part of it - rhamphotheca may be more appropriate
  • Added
    • + cutaneous appendage comment Examples: hair, nail (FMA); feather, claw, hoof, horn, wattle, spur, beak, scale(?), antler, bristle. Editors note: Mammary glands develop by similar mechanisms, and there is an argument for including them here (e.g. http://www.ncbi.nlm.nih.gov/pubmed/20484386), but these structures do not fit the current definition (lactiferous glands are part of the integumentary system in FMA). Note the FMA class is a subdivision of epidermis, which may be too restrictive for our purposes here. TODO: revise after definition of appendage is finalized in CARO2; in addition, verify subtypes w.r.t definition - e.g. beaks may overlap with skin of body rather than being part of it - rhamphotheca may be more appropriate

Changes for: sense organ

Changes for: appendage

Changes for: lymph node

Changes for: olfactory apparatus

Changes for: uterine cervix

Changes for: submucosa

Changes for: pituitary gland

Changes for: islet of Langerhans

Changes for: external elastic membrane

Changes for: hilar portion of hepatic duct

Changes for: lingula of left lung

Changes for: lower lobe of left lung

Changes for: upper lobe of left lung

Changes for: left lung lobe

Changes for: centrum semiovale

Changes for: forelimb bone

Changes for: egg chamber

Changes for: somatosensory cortex

Changes for: secondary somatosensory cortex

Changes for: primary somatosensory cortex

Changes for: bilaminar disc

Changes for: albumen

Changes for: respiratory primordium

Changes for: upper lobe of lung

Changes for: lower lobe of lung

Changes for: male reproductive system

Changes for: external ectoderm

Changes for: renal glomerulus

Changes for: subdivision of skeletal system

Changes for: pore

Changes for: regional part of nervous system

Changes for: hypoblast (generic)

Changes for: morula

Changes for: zona pellucida

Changes for: inner cell mass

Changes for: trophoblast

Changes for: metanephros

Changes for: ureteric bud

Changes for: mesonephros

Changes for: fornix of brain

Changes for: macula lutea

Changes for: duct

Changes for: large intestine

Changes for: ureter

Changes for: urethra

Changes for: fornix of vagina

Changes for: organ part

Changes for: organ

Changes for: individual digit of digitopodial skeleton

Changes for: pedal digit digitopodial skeleton

Changes for: manual digit 1 digitopodial skeleton

Changes for: manual digit 5 digitopodial skeleton

Changes for: manual digit 4 digitopodial skeleton

Changes for: manual digit 3 digitopodial skeleton

Changes for: manual digit 2 digitopodial skeleton

Changes for: pedal digit 4 digitopodial skeleton

Changes for: pedal digit 3 digitopodial skeleton

Changes for: pedal digit 2 digitopodial skeleton

Changes for: pedal digit 1 digitopodial skeleton

Changes for: pedal digit 5 digitopodial skeleton

Changes for: manual digit 7 plus metapodial segment

Changes for: manual digit 6 plus metapodial segment

Changes for: pedal digit 6 plus metapodial segment

Changes for: manual digit 8 plus metapodial segment

Changes for: chordae tendineae

Changes for: reticulum trabeculare

Changes for: infundibulum of hair follicle

Changes for: posterior cerebellomedullary cistern

Changes for: ansiform lobule crus I

Changes for: ansiform lobule crus II

Changes for: olfactory bulb outer nerve layer

Changes for: axial skeleton plus cranial skeleton

Changes for: outflow part of right ventricle

Changes for: inferior nasal concha

Changes for: external naris

Changes for: bulb of hair follicle

Changes for: occipital region

Changes for: transitional epithelium

Changes for: slow muscle tissue

Changes for: fast muscle tissue

Changes for: maxillary prominence

Changes for: stratified squamous epithelium

Changes for: squamous epithelium

Changes for: urinary bladder muscularis mucosa

Changes for: mandibular prominence

Changes for: pre-cartilage condensation

Changes for: pharyngeal cleft

Changes for: glandular columnar epithelium

Changes for: esophagus squamous epithelium

Changes for: cervix squamous epithelium

Changes for: vagina squamous epithelium

Changes for: neural tube alar plate

Changes for: efferent duct

Changes for: pes bone

Changes for: jointed/prehensile appendage

Changes for: stellate reticulum

Changes for: outer dental epithelium

Changes for: inner dental epithelium

Changes for: buccal mucosa

Changes for: pontine flexure

Changes for: gracile fasciculus

Changes for: great vein of heart

Changes for: gracile fasciculus of spinal cord

Changes for: ovary stroma

Changes for: cuneate fasciculus

Changes for: pars distalis of adenohypophysis

Changes for: cuneate fasciculus of spinal cord

Changes for: thoracic spinal cord dorsal column

Changes for: spinal cord segment

Changes for: lumbar spinal cord dorsal column

Changes for: sacral spinal cord

Changes for: sacral spinal cord dorsal column

Changes for: cervical spinal cord dorsal column

Changes for: cervical spinal cord lateral column

Changes for: sacral spinal cord lateral column

Changes for: thoracic spinal cord lateral column

Changes for: sacral spinal cord ventral column

Changes for: cervical spinal cord ventral column

Changes for: lumbar spinal cord ventral column

Changes for: lumbar spinal cord lateral column

Changes for: anatomical surface

Changes for: thoracic spinal cord ventral column

Changes for: segment of aorta

Changes for: portal system

Changes for: cephalic flexure

Changes for: cervical flexure

Changes for: cochlear ganglion

Changes for: vallate papilla

Changes for: leptomeninx

Changes for: apocrine sweat gland

Changes for: meniscus

Changes for: epiglottis

Changes for: urinary bladder detrusor smooth muscle

Changes for: tapetum of corpus callosum

Changes for: syncytiotrophoblast

Changes for: tongue muscle

Changes for: mandibular nerve

Changes for: hindlimb stylopod

Changes for: urothelium

Changes for: reticuloendothelial system

Changes for: renal medulla

Changes for: corpus striatum

Changes for: parenchyma

Changes for: preputial gland

Changes for: blastocyst

Changes for: throat

Changes for: myelin

Changes for: mucosa

Changes for: myelin sheath

Changes for: ophthalmic nerve

Changes for: limbic system

Changes for: urorectal septum

Changes for: lateral tuberal nucleus

Changes for: pedal digit 6 digitopodial skeleton

Changes for: manual digit 6 digitopodial skeleton

Changes for: manual digit 8 digitopodial skeleton

Changes for: manual digit 7 digitopodial skeleton

Changes for: basement membrane of epithelium

Changes for: endopeduncular nucleus

Changes for: glomerular basement membrane

Changes for: septum of telencephalon

Changes for: habenular trigone

Changes for: decidual cell

Changes for: left testicular vein

Changes for: lymphoid follicle

Changes for: right testicular vein

Changes for: subdural space

Changes for: dermal papilla

Changes for: visceral layer of glomerular capsule

Changes for: prostate epithelium

Changes for: glomerular parietal epithelium

Changes for: obsolete cytotrophoblastic cell

Changes for: gastric pit

Changes for: eccrine sweat gland

Changes for: scalp

Changes for: lamina densa of glomerular basement membrane

Changes for: lamina rara interna

Changes for: lamina rara externa

Changes for: olfactory system

Changes for: pronephric mesoderm

  • Deleted
    • - pronephric mesoderm SubClassOf immediate transformation of some presumptive pronephric mesoderm
    • - pronephric mesoderm comment the intermediate mesoderm of the chick embryo acquires its ability to form kidneys through its interactions with the paraxial mesoderm [ISBN:9780878932504 “Developmental Biology”, PMID:10720431 “Signals from trunk paraxial mesoderm induce pronephros formation in chick intermediate mesoderm”]. These interactions induce the expression of TFs including Lim1, Pax2 and Pax6 that cause the intermediate mesoderm to form the kidney
  • Added
    • + pronephric mesoderm SubClassOf immediate transformation of some presumptive pronephric mesoderm
    • + pronephric mesoderm comment the intermediate mesoderm of the chick embryo acquires its ability to form kidneys through its interactions with the paraxial mesoderm [ISBN:9780878932504 “Developmental Biology”, http://www.ncbi.nlm.nih.gov/pubmed/10720431 “Signals from trunk paraxial mesoderm induce pronephros formation in chick intermediate mesoderm”]. These interactions induce the expression of TFs including Lim1, Pax2 and Pax6 that cause the intermediate mesoderm to form the kidney

Changes for: tunica adventitia of blood vessel

Changes for: post-anal tail

Changes for: craniocervical region

Changes for: unilaminar epithelium

Changes for: connecting stalk

Changes for: thoracic spinal cord ventral commissure

Changes for: cervical spinal cord ventral commissure

Changes for: sacral spinal cord ventral commissure

Changes for: lumbar spinal cord ventral commissure

Changes for: pectoral girdle skeleton

Changes for: pelvic girdle bone/zone

Changes for: external nose

Changes for: minor vestibular gland

Changes for: anatomical space

Changes for: portion of organism substance

Changes for: anatomical system

Changes for: multi-cellular organism

Changes for: prefrontal cortex

Changes for: cerebral subcortex

Changes for: decidua basalis

Changes for: endocervix

Changes for: bodily secretion

Changes for: dense regular connective tissue

Changes for: multilaminar epithelium

Changes for: simple columnar epithelium

Changes for: simple squamous epithelium

Changes for: basal lamina of epithelium

Changes for: simple cuboidal epithelium

Changes for: epithelium

Changes for: organism subdivision

Changes for: female reproductive system

Changes for: testis

Changes for: simple organ

Changes for: cell part

Changes for: extraembryonic structure

Changes for: tissue

Changes for: primary palate

Changes for: suprarenal artery

Changes for: ventral mesogastrium

Changes for: ultimobranchial body epithelium

  • Deleted
    • - ultimobranchial body epithelium comment in EHDAA2, develops_from ventral 4th arch branchial pouch endoderm. Kardong: develops from 5th pouch. PMID:16313389: the most posterior pouch generates the ultimobranchial bodies in most vertebrate classes, mammals do not form this structure.
  • Added
    • + ultimobranchial body epithelium comment in EHDAA2, develops_from ventral 4th arch branchial pouch endoderm. Kardong: develops from 5th pouch. http://www.ncbi.nlm.nih.gov/pubmed/16313389: the most posterior pouch generates the ultimobranchial bodies in most vertebrate classes, mammals do not form this structure.

Changes for: ileocecal valve

Changes for: iliac artery

Changes for: dorsal mesogastrium

Changes for: mesenteric artery

Changes for: mesenteric vein

Changes for: inner canthus

Changes for: intercostal artery

Changes for: lens anterior epithelium

Changes for: iliac vein

Changes for: mammillotegmental axonal tract

Changes for: distal tarsal bone

Changes for: foramen cecum of tongue

Changes for: mammillothalamic axonal tract

Changes for: hindlimb zeugopod skeleton

Changes for: tentorium cerebelli

Changes for: sphenoid lesser wing pre-cartilage condensation

Changes for: vertebral canal

Changes for: alular digit plus metapodial segment

Changes for: manual minor digit (Aves) plus metapodial segment

Changes for: manual major digit (Aves) plus metapodial segment

Changes for: foramen secundum

Changes for: carina of trachea

Changes for: digit mesenchyme

Changes for: muscularis mucosa

Changes for: central tendon of diaphragm

Changes for: frenulum of tongue

Changes for: interthalamic adhesion

Changes for: secondary follicle corona

Changes for: germinal center

Changes for: rib 8

Changes for: middle pharyngeal constrictor

Changes for: sacral vertebra pre-cartilage condensation

Changes for: meningeal cluster

Changes for: shell

Changes for: aponeurosis

Changes for: venous sinus

Changes for: presumptive mesoderm

Changes for: presumptive ectoderm

Changes for: muscle layer

Changes for: pituitary fossa

Changes for: great cerebral vein

Changes for: appendix testis

Changes for: tunica vaginalis testis

Changes for: glenoid fossa

Changes for: interphalangeal joint

Changes for: glans clitoris

Changes for: tunica albuginea of testis

Changes for: lumbar artery

Changes for: remnant of urachus

Changes for: digit plus metapodial segment

Changes for: platysma

Changes for: obturator nerve

Changes for: lower back

Changes for: marginal sinus of lymph node

Changes for: sigmoid sinus

Changes for: sulcus limitans of neural tube

Changes for: venous dural sinus

Changes for: vitelline vein

Changes for: tentorial sinus

Changes for: valve of inferior vena cava

Changes for: hyoid muscle

Changes for: pedal digit 7 plus metapodial segment

Changes for: superficial palmar arch

Changes for: pedal digit 8 plus metapodial segment

Changes for: pectinate line

Changes for: vestibular organ

Changes for: otolymph

Changes for: round ligament of liver

Changes for: round ligament of uterus

Changes for: presumptive hypochord

Changes for: presumptive endoderm

Changes for: transformed vein

Changes for: transformed artery

Changes for: palmar hand interosseous muscle

Changes for: plantar foot interosseous muscle

Changes for: pallidum

Changes for: dorsal pallidum

Changes for: kidney calyx

Changes for: right lung lobe

Changes for: respiratory system fluid/secretion

Changes for: oculomotor muscle

Changes for: renal convoluted tubule

Changes for: anterior spinal artery

Changes for: coronary sinus

Changes for: conus medullaris

Changes for: cisterna chyli

Changes for: jugular foramen

Changes for: internal oblique

Changes for: external intercostal muscle

Changes for: ductus arteriosus

Changes for: greater omentum

Changes for: filum terminale

Changes for: external oblique

Changes for: spinocerebellar tract

Changes for: gastrointestinal system

Changes for: circumventricular organ

Changes for: ventral striatum

Changes for: hippocampus molecular layer

Changes for: olfactory lobe

Changes for: hippocampus stratum oriens

Changes for: hippocampus stratum radiatum

Changes for: spinal cord dorsal column

Changes for: spinal cord lateral column

Changes for: spinal cord ventral column

Changes for: olfactory bulb external plexiform layer

Changes for: olfactory bulb glomerular layer

Changes for: olfactory bulb granule cell layer

Changes for: paramedian lobule

Changes for: copula pyramidis

Changes for: ansiform lobule

Changes for: cerebellum vermis lobule VIIa

Changes for: cerebellum vermis lobule VIIb

Changes for: cortical plate

Changes for: lobule simplex

Changes for: paraflocculus

Changes for: spermatic cord

Changes for: Rathke’s pouch

Changes for: olfactory segment of nasal mucosa

Changes for: nasal cavity respiratory epithelium

Changes for: nasal cavity epithelium

Changes for: caudate-putamen

Changes for: dorsal striatum

Changes for: dentate gyrus granule cell layer

Changes for: cortical layer VI

Changes for: cortical layer V

Changes for: brain arachnoid mater

Changes for: carotid artery segment

Changes for: cortical layer II

Changes for: cortical layer I

Changes for: cortical layer IV

Changes for: cortical layer III

Changes for: articular cartilage of joint

Changes for: arytenoid muscle

Changes for: craniocervical muscle

Changes for: occipitofrontalis muscle

Changes for: sternooccipital muscle

Changes for: cleidooccipital muscle

Changes for: crico-arytenoid muscle

Changes for: salpingopharyngeus muscle

Changes for: lateral thyrohyoid ligament

Changes for: median thyrohyoid ligament

Changes for: cricopharyngeus muscle

Changes for: thyroepiglotticus muscle

Changes for: thyrohyoid ligament

Changes for: manual digit plus metapodial segment

Changes for: manual digit digitopodial skeleton

Changes for: footplate

Changes for: handplate

Changes for: decidua parietalis

Changes for: diaphysis of femur

Changes for: scapula

Changes for: posterior pretectal nucleus

Changes for: cerebellar commissure

Changes for: lymphatic capillary

Changes for: nucleus of lateral lemniscus

Changes for: cusp of tooth

Changes for: cutaneous muscle

Changes for: olecranon

Changes for: proximal head of humerus

Changes for: obturator foramen

Changes for: chorioallantoic membrane

Changes for: female preputial gland

Changes for: male preputial gland

Changes for: submucous nerve plexus

Changes for: hypogastric nerve

Changes for: thyroid follicle

Changes for: perimysium

Changes for: osseus labyrinth vestibule

Changes for: postganglionic autonomic fiber

Changes for: preganglionic autonomic fiber

Changes for: postganglionic sympathetic fiber

Changes for: postganglionic parasympathetic fiber

Changes for: stomach non-glandular region

Changes for: stomach glandular region

Changes for: myelencephalon

Changes for: tela choroidea

Changes for: ventricular system of central nervous system

Changes for: tela choroidea of fourth ventricle

Changes for: tela choroidea of telencephalic ventricle

Changes for: tela choroidea of third ventricle

Changes for: genital ridge

Changes for: cerebellum lobe

Changes for: ovary sex cord

Changes for: sex cord

Changes for: testis sex cord

Changes for: prepuce of clitoris

Changes for: transverse tarsal joint

Changes for: mesotarsal joint

Changes for: crurotarsal joint

Changes for: tragus

Changes for: deep layer of superior colliculus

Changes for: superficial layer of superior colliculus

Changes for: intermediate layer of superior colliculus

Changes for: deep white layer of superior colliculus

Changes for: glandular epithelium

Changes for: anterior communicating artery

Changes for: stomach

Changes for: epithelium of conjunctiva

Changes for: cardial valve

Changes for: aorta

Changes for: cranial nerve II

Changes for: head of femur

Changes for: frontal nerve (branch of ophthalmic)

Changes for: corneo-scleral junction

Changes for: heart

  • Deleted
    • - heart comment note that we use the term ‘primary circulatory organ’ for the generic class. Taxon notes:” the ascidian tube-like heart lacks chambers….The ascidian heart is formed after metamorphosis as a simple tube-like structure with a single-layered myoepi- thelium that is continuous with a single-layered pericar- dial wall. It lacks chambers and endocardium…. The innovation of the chambered heart was a key event in vertebrate evolution, because the chambered heart generates one-way blood flow with high pressure, a critical requirement for the efficient blood supply of large-body vertebrates… all extant vertebrates have hearts with two or more chambers (Moorman and Christoffels 2003)” doi:10.1101/gad.1485706
    • - heart database cross reference ncithesaurus:Heart
  • Added
    • + heart comment note that we use the term ‘primary circulatory organ’ for the generic class. Taxon notes:” the ascidian tube-like heart lacks chambers….The ascidian heart is formed after metamorphosis as a simple tube-like structure with a single-layered myoepi- thelium that is continuous with a single-layered pericar- dial wall. It lacks chambers and endocardium…. The innovation of the chambered heart was a key event in vertebrate evolution, because the chambered heart generates one-way blood flow with high pressure, a critical requirement for the efficient blood supply of large-body vertebrates… all extant vertebrates have hearts with two or more chambers (Moorman and Christoffels 2003)” http://dx.doi.org/10.1101/gad.1485706
    • + heart database cross reference http://ncicb.nci.nih.gov/xml/owl/EVS/Heart

Changes for: endocrine system

Changes for: anterior commissure

Changes for: posterior commissure

Changes for: pharyngeal muscle

Changes for: proctodeum

Changes for: inferior parathyroid gland

Changes for: stomodeum

Changes for: thoracic ganglion

Changes for: nerve of cervical vertebra

Changes for: deep gray layer of superior colliculus

Changes for: cornea

Changes for: middle gray layer of superior colliculus

Changes for: lens of camera-type eye

Changes for: middle white layer of superior colliculus

Changes for: retina

Changes for: white matter of superior colliculus

Changes for: layer of superior colliculus

Changes for: zonal layer of superior colliculus

Changes for: gracilis

Changes for: tectal plate

Changes for: superficial white layer of superior colliculus

Changes for: brain

Changes for: cerebral cortex

Changes for: optic chiasma

Changes for: liver perisinusoidal space

Changes for: outer canthus

Changes for: hippocampal commissure

Changes for: cochlear modiolus

Changes for: medial pterygoid muscle

Changes for: lateral pterygoid muscle

Changes for: superior parathyroid gland

Changes for: mesoderm

Changes for: germ layer

Changes for: paleodentate of dentate nucleus

Changes for: embryo

Changes for: endoderm

Changes for: ectoderm

Changes for: mucus

Changes for: chyle

Changes for: penis

Changes for: pons

Changes for: axillary vein

Changes for: skeletal joint

Changes for: trochanter

Changes for: femur

Changes for: pleura

Changes for: tibia

Changes for: neck

Changes for: humerus

Changes for: sternum

Changes for: vagina

Changes for: uterus

Changes for: seminal vesicle

Changes for: mammalian vulva

Changes for: ejaculatory duct

Changes for: reproductive system

Changes for: gonad

Changes for: female gonad

Changes for: oviduct

Report for properties

ObjectProperty objects lost from source: 14

ObjectProperty objects new in target: 12

New ObjectProperty : part of structure that is capable of

New ObjectProperty : developmentally preceded by

New ObjectProperty : existence ends with

New ObjectProperty : existence ends during

New ObjectProperty : existence ends during or before

New ObjectProperty : existence starts during or after

New ObjectProperty : immediate transformation of

New ObjectProperty : transformation of

New ObjectProperty : existence starts during

New ObjectProperty : existence starts with

New ObjectProperty : null

Changed ObjectProperty objects: 16

Changes for: immediately_deep_to

Changes for: in_deep_part_of

Changes for: in_superficial_part_of

Changes for: existence starts and ends during

Changes for: superficial_to

Changes for: deep_to

Changes for: proximal_to

Changes for: ventral_to

Changes for: capable_of

Changes for: capable_of_part_of

Changes for: output of

Changes for: distal_to

Changes for: dorsal_to

Changes for: posterior_to

Changes for: anterior_to

Changes for: has skeleton

May 16, 2014 |

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