2014-05-03 release

Chris Mungall

2014-05-03 release

Digits

Ontology Diff Report

limb/fin: digits issue #420
- Addition of new classes to represent the extended concept of digit.
- We include two pairs of classes:
- 1. the ‘digitopodial skeleton’ ie proximo-distal series of phalanges plus a metapodial
- 1. 1+soft tissue
- Note the 2nd concept typically does not correspond to a distinct subdivision of the
- whole hand or foot (e.g. in humans this is continuous in the metapodial region)
NTs for dorsal and ventral optic cup. #419
NT: skin scent gland. NT: interdigital gland

Original Ontology

IRI: http://purl.obolibrary.org/obo/uberon.owl
VersionIRI: http://purl.obolibrary.org/obo/uberon/releases/2014-04-30/uberon.owl

New Ontology

IRI: http://purl.obolibrary.org/obo/uberon.owl
VersionIRI: http://purl.obolibrary.org/obo/uberon/releases/2014-05-03/uberon.owl

Report for classes

Class objects lost from source: 0

Class objects new in target: 58

New Class : digit 1 plus metapodial segment

digit 1 plus metapodial segment has obo namespace uberon
digit 1 plus metapodial segment has exact synonym digit 1 ray { database cross reference=UBERON:cjm }
digit 1 plus metapodial segment has broad synonym digit 1 ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
digit 1 plus metapodial segment has exact synonym digit 1 digitopodial subdivision { database cross reference=UBERON:cjm }
digit 1 plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
digit 1 plus metapodial segment definition A subdivision of the autopod consisting of digit 1 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
digit 1 plus metapodial segment label digit 1 plus metapodial segment
digit 1 plus metapodial segment has broad synonym digit 1 { database cross reference=UBERON:cjm }
digit 1 plus metapodial segment id UBERON:5006048
digit 1 plus metapodial segment SubClassOf digit plus metapodial segment

New Class : digit 2 plus metapodial segment

digit 2 plus metapodial segment has broad synonym digit 2 ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
digit 2 plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
digit 2 plus metapodial segment label digit 2 plus metapodial segment
digit 2 plus metapodial segment id UBERON:5006049
digit 2 plus metapodial segment has obo namespace uberon
digit 2 plus metapodial segment has broad synonym digit 2 { database cross reference=UBERON:cjm }
digit 2 plus metapodial segment SubClassOf digit plus metapodial segment
digit 2 plus metapodial segment definition A subdivision of the autopod consisting of digit 2 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
digit 2 plus metapodial segment has exact synonym digit 2 digitopodial subdivision { database cross reference=UBERON:cjm }
digit 2 plus metapodial segment has exact synonym digit 2 ray { database cross reference=UBERON:cjm }

New Class : digit 3 plus metapodial segment

digit 3 plus metapodial segment has broad synonym digit 3 { database cross reference=UBERON:cjm }
digit 3 plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
digit 3 plus metapodial segment label digit 3 plus metapodial segment
digit 3 plus metapodial segment id UBERON:5006050
digit 3 plus metapodial segment definition A subdivision of the autopod consisting of digit 3 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
digit 3 plus metapodial segment SubClassOf digit plus metapodial segment
digit 3 plus metapodial segment has exact synonym digit 3 digitopodial subdivision { database cross reference=UBERON:cjm }
digit 3 plus metapodial segment has obo namespace uberon
digit 3 plus metapodial segment has broad synonym digit 3 ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
digit 3 plus metapodial segment has exact synonym digit 3 ray { database cross reference=UBERON:cjm }

New Class : digit 5 plus metapodial segment

digit 5 plus metapodial segment has exact synonym digit 5 digitopodial subdivision { database cross reference=UBERON:cjm }
digit 5 plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
digit 5 plus metapodial segment has broad synonym digit 5 { database cross reference=UBERON:cjm }
digit 5 plus metapodial segment SubClassOf digit plus metapodial segment
digit 5 plus metapodial segment has broad synonym digit 5 ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
digit 5 plus metapodial segment id UBERON:5006052
digit 5 plus metapodial segment label digit 5 plus metapodial segment
digit 5 plus metapodial segment definition A subdivision of the autopod consisting of digit 5 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
digit 5 plus metapodial segment has obo namespace uberon
digit 5 plus metapodial segment has exact synonym digit 5 ray { database cross reference=UBERON:cjm }

New Class : digit 4 plus metapodial segment

digit 4 plus metapodial segment has broad synonym digit 4 { database cross reference=UBERON:cjm }
digit 4 plus metapodial segment has obo namespace uberon
digit 4 plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
digit 4 plus metapodial segment definition A subdivision of the autopod consisting of digit 4 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
digit 4 plus metapodial segment id UBERON:5006051
digit 4 plus metapodial segment has exact synonym digit 4 digitopodial subdivision { database cross reference=UBERON:cjm }
digit 4 plus metapodial segment label digit 4 plus metapodial segment
digit 4 plus metapodial segment SubClassOf digit plus metapodial segment
digit 4 plus metapodial segment has exact synonym digit 4 ray { database cross reference=UBERON:cjm }
digit 4 plus metapodial segment has broad synonym digit 4 ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }

New Class : digit digitopodial skeleton

digit digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of digit plus the associated metapodial element. { database cross reference=UBERON:cjm }
digit digitopodial skeleton has obo namespace uberon
digit digitopodial skeleton id UBERON:5102544
digit digitopodial skeleton has related synonym digit skeleton { database cross reference=UBERON:cjm }
digit digitopodial skeleton SubClassOf mesoderm-derived structure
digit digitopodial skeleton SubClassOf part of some digit plus metapodial segment
digit digitopodial skeleton has related synonym digit { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
digit digitopodial skeleton SubClassOf part of some skeleton of digitopodium
digit digitopodial skeleton SubClassOf subdivision of some digit plus metapodial segment
digit digitopodial skeleton SubClassOf limb skeleton subdivision
digit digitopodial skeleton label digit digitopodial skeleton
digit digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some digit plus metapodial segment
digit digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.

New Class : pedal digit digitopodial skeleton

pedal digit digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit plus the associated metapodial element. { database cross reference=UBERON:cjm }
pedal digit digitopodial skeleton SubClassOf digit digitopodial skeleton
pedal digit digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some pedal digit plus metapodial segment
pedal digit digitopodial skeleton SubClassOf subdivision of some pedal digit plus metapodial segment
pedal digit digitopodial skeleton id UBERON:5101466
pedal digit digitopodial skeleton label pedal digit digitopodial skeleton
pedal digit digitopodial skeleton SubClassOf part of some pedal digit plus metapodial segment
pedal digit digitopodial skeleton has related synonym pedal digit skeleton { database cross reference=UBERON:cjm }
pedal digit digitopodial skeleton has obo namespace uberon
pedal digit digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
pedal digit digitopodial skeleton has related synonym pedal digit { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
pedal digit digitopodial skeleton SubClassOf part of some skeleton of digitopodium

New Class : manual digit 1 digitopodial skeleton

manual digit 1 digitopodial skeleton has obo namespace uberon
manual digit 1 digitopodial skeleton SubClassOf part of some manual digit 1 plus metapodial segment
manual digit 1 digitopodial skeleton id UBERON:5101463
manual digit 1 digitopodial skeleton SubClassOf subdivision of some manual digit 1 plus metapodial segment
manual digit 1 digitopodial skeleton label manual digit 1 digitopodial skeleton
manual digit 1 digitopodial skeleton SubClassOf part of some skeleton of digitopodium
manual digit 1 digitopodial skeleton has related synonym manual digit 1 skeleton { database cross reference=UBERON:cjm }
manual digit 1 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 1 plus the associated metapodial element. { database cross reference=UBERON:cjm }
manual digit 1 digitopodial skeleton has related synonym manual digit 1 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual digit 1 digitopodial skeleton SubClassOf digit 1 digitopodial skeleton
manual digit 1 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
manual digit 1 digitopodial skeleton SubClassOf manual digit digitopodial skeleton
manual digit 1 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some manual digit 1 plus metapodial segment

New Class : manual digit 5 digitopodial skeleton

manual digit 5 digitopodial skeleton SubClassOf digit 5 digitopodial skeleton
manual digit 5 digitopodial skeleton SubClassOf part of some manual digit 5 plus metapodial segment
manual digit 5 digitopodial skeleton has obo namespace uberon
manual digit 5 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 5 plus the associated metapodial element. { database cross reference=UBERON:cjm }
manual digit 5 digitopodial skeleton has related synonym manual digit 5 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual digit 5 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
manual digit 5 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some manual digit 5 plus metapodial segment
manual digit 5 digitopodial skeleton has related synonym manual digit 5 skeleton { database cross reference=UBERON:cjm }
manual digit 5 digitopodial skeleton label manual digit 5 digitopodial skeleton
manual digit 5 digitopodial skeleton SubClassOf part of some skeleton of digitopodium
manual digit 5 digitopodial skeleton SubClassOf subdivision of some manual digit 5 plus metapodial segment
manual digit 5 digitopodial skeleton SubClassOf manual digit digitopodial skeleton
manual digit 5 digitopodial skeleton id UBERON:5103625

New Class : manual digit 4 digitopodial skeleton

manual digit 4 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 4 plus the associated metapodial element. { database cross reference=UBERON:cjm }
manual digit 4 digitopodial skeleton SubClassOf part of some manual digit 4 plus metapodial segment
manual digit 4 digitopodial skeleton has related synonym manual digit 4 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual digit 4 digitopodial skeleton label manual digit 4 digitopodial skeleton
manual digit 4 digitopodial skeleton has obo namespace uberon
manual digit 4 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
manual digit 4 digitopodial skeleton SubClassOf subdivision of some manual digit 4 plus metapodial segment
manual digit 4 digitopodial skeleton SubClassOf digit 4 digitopodial skeleton
manual digit 4 digitopodial skeleton id UBERON:5103624
manual digit 4 digitopodial skeleton SubClassOf manual digit digitopodial skeleton
manual digit 4 digitopodial skeleton SubClassOf part of some skeleton of digitopodium
manual digit 4 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some manual digit 4 plus metapodial segment
manual digit 4 digitopodial skeleton has related synonym manual digit 4 skeleton { database cross reference=UBERON:cjm }

New Class : manual digit 3 digitopodial skeleton

manual digit 3 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
manual digit 3 digitopodial skeleton has obo namespace uberon
manual digit 3 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some manual digit 3 plus metapodial segment
manual digit 3 digitopodial skeleton SubClassOf manual digit digitopodial skeleton
manual digit 3 digitopodial skeleton SubClassOf subdivision of some manual digit 3 plus metapodial segment
manual digit 3 digitopodial skeleton SubClassOf part of some skeleton of digitopodium
manual digit 3 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 3 plus the associated metapodial element. { database cross reference=UBERON:cjm }
manual digit 3 digitopodial skeleton id UBERON:5103623
manual digit 3 digitopodial skeleton has related synonym manual digit 3 skeleton { database cross reference=UBERON:cjm }
manual digit 3 digitopodial skeleton has related synonym manual digit 3 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual digit 3 digitopodial skeleton SubClassOf part of some manual digit 3 plus metapodial segment
manual digit 3 digitopodial skeleton label manual digit 3 digitopodial skeleton
manual digit 3 digitopodial skeleton SubClassOf digit 3 digitopodial skeleton

New Class : manual digit 2 digitopodial skeleton

manual digit 2 digitopodial skeleton has related synonym manual digit 2 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual digit 2 digitopodial skeleton has obo namespace uberon
manual digit 2 digitopodial skeleton has related synonym manual digit 2 skeleton { database cross reference=UBERON:cjm }
manual digit 2 digitopodial skeleton SubClassOf part of some manual digit 2 plus metapodial segment
manual digit 2 digitopodial skeleton SubClassOf manual digit digitopodial skeleton
manual digit 2 digitopodial skeleton SubClassOf digit 2 digitopodial skeleton
manual digit 2 digitopodial skeleton SubClassOf subdivision of some manual digit 2 plus metapodial segment
manual digit 2 digitopodial skeleton id UBERON:5103622
manual digit 2 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
manual digit 2 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some manual digit 2 plus metapodial segment
manual digit 2 digitopodial skeleton SubClassOf part of some skeleton of digitopodium
manual digit 2 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 2 plus the associated metapodial element. { database cross reference=UBERON:cjm }
manual digit 2 digitopodial skeleton label manual digit 2 digitopodial skeleton

New Class : pedal digit 4 digitopodial skeleton

pedal digit 4 digitopodial skeleton SubClassOf part of some skeleton of digitopodium
pedal digit 4 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some pedal digit 4 plus metapodial segment
pedal digit 4 digitopodial skeleton has obo namespace uberon
pedal digit 4 digitopodial skeleton id UBERON:5103634
pedal digit 4 digitopodial skeleton label pedal digit 4 digitopodial skeleton
pedal digit 4 digitopodial skeleton has related synonym pedal digit 4 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
pedal digit 4 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 4 plus the associated metapodial element. { database cross reference=UBERON:cjm }
pedal digit 4 digitopodial skeleton SubClassOf part of some pedal digit 4 plus metapodial segment
pedal digit 4 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
pedal digit 4 digitopodial skeleton SubClassOf pedal digit digitopodial skeleton
pedal digit 4 digitopodial skeleton has related synonym pedal digit 4 skeleton { database cross reference=UBERON:cjm }
pedal digit 4 digitopodial skeleton SubClassOf subdivision of some pedal digit 4 plus metapodial segment
pedal digit 4 digitopodial skeleton SubClassOf digit 4 digitopodial skeleton

New Class : pedal digit 3 digitopodial skeleton

pedal digit 3 digitopodial skeleton id UBERON:5103633
pedal digit 3 digitopodial skeleton SubClassOf part of some skeleton of digitopodium
pedal digit 3 digitopodial skeleton SubClassOf digit 3 digitopodial skeleton
pedal digit 3 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some pedal digit 3 plus metapodial segment
pedal digit 3 digitopodial skeleton SubClassOf pedal digit digitopodial skeleton
pedal digit 3 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 3 plus the associated metapodial element. { database cross reference=UBERON:cjm }
pedal digit 3 digitopodial skeleton SubClassOf part of some pedal digit 3 plus metapodial segment
pedal digit 3 digitopodial skeleton has related synonym pedal digit 3 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
pedal digit 3 digitopodial skeleton has related synonym pedal digit 3 skeleton { database cross reference=UBERON:cjm }
pedal digit 3 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
pedal digit 3 digitopodial skeleton has obo namespace uberon
pedal digit 3 digitopodial skeleton SubClassOf subdivision of some pedal digit 3 plus metapodial segment
pedal digit 3 digitopodial skeleton label pedal digit 3 digitopodial skeleton

New Class : pedal digit 2 digitopodial skeleton

pedal digit 2 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some pedal digit 2 plus metapodial segment
pedal digit 2 digitopodial skeleton has related synonym pedal digit 2 skeleton { database cross reference=UBERON:cjm }
pedal digit 2 digitopodial skeleton SubClassOf digit 2 digitopodial skeleton
pedal digit 2 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 2 plus the associated metapodial element. { database cross reference=UBERON:cjm }
pedal digit 2 digitopodial skeleton id UBERON:5103632
pedal digit 2 digitopodial skeleton has related synonym pedal digit 2 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
pedal digit 2 digitopodial skeleton SubClassOf part of some skeleton of digitopodium
pedal digit 2 digitopodial skeleton label pedal digit 2 digitopodial skeleton
pedal digit 2 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
pedal digit 2 digitopodial skeleton SubClassOf part of some pedal digit 2 plus metapodial segment
pedal digit 2 digitopodial skeleton has obo namespace uberon
pedal digit 2 digitopodial skeleton SubClassOf pedal digit digitopodial skeleton
pedal digit 2 digitopodial skeleton SubClassOf subdivision of some pedal digit 2 plus metapodial segment

New Class : pedal digit 1 digitopodial skeleton

pedal digit 1 digitopodial skeleton SubClassOf part of some pedal digit 1 plus metapodial segment
pedal digit 1 digitopodial skeleton SubClassOf pedal digit digitopodial skeleton
pedal digit 1 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 1 plus the associated metapodial element. { database cross reference=UBERON:cjm }
pedal digit 1 digitopodial skeleton SubClassOf part of some skeleton of digitopodium
pedal digit 1 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
pedal digit 1 digitopodial skeleton SubClassOf digit 1 digitopodial skeleton
pedal digit 1 digitopodial skeleton has related synonym pedal digit 1 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
pedal digit 1 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some pedal digit 1 plus metapodial segment
pedal digit 1 digitopodial skeleton SubClassOf subdivision of some pedal digit 1 plus metapodial segment
pedal digit 1 digitopodial skeleton has related synonym pedal digit 1 skeleton { database cross reference=UBERON:cjm }
pedal digit 1 digitopodial skeleton has obo namespace uberon
pedal digit 1 digitopodial skeleton label pedal digit 1 digitopodial skeleton
pedal digit 1 digitopodial skeleton id UBERON:5103631

New Class : pedal digit 5 digitopodial skeleton

pedal digit 5 digitopodial skeleton has obo namespace uberon
pedal digit 5 digitopodial skeleton id UBERON:5103635
pedal digit 5 digitopodial skeleton SubClassOf digit 5 digitopodial skeleton
pedal digit 5 digitopodial skeleton label pedal digit 5 digitopodial skeleton
pedal digit 5 digitopodial skeleton SubClassOf part of some pedal digit 5 plus metapodial segment
pedal digit 5 digitopodial skeleton SubClassOf part of some skeleton of digitopodium
pedal digit 5 digitopodial skeleton SubClassOf pedal digit digitopodial skeleton
pedal digit 5 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
pedal digit 5 digitopodial skeleton has related synonym pedal digit 5 skeleton { database cross reference=UBERON:cjm }
pedal digit 5 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some pedal digit 5 plus metapodial segment
pedal digit 5 digitopodial skeleton has related synonym pedal digit 5 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
pedal digit 5 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 5 plus the associated metapodial element. { database cross reference=UBERON:cjm }
pedal digit 5 digitopodial skeleton SubClassOf subdivision of some pedal digit 5 plus metapodial segment

New Class : manual digit 7 plus metapodial segment

manual digit 7 plus metapodial segment has exact synonym manual digit 7 ray { database cross reference=UBERON:cjm }
manual digit 7 plus metapodial segment has obo namespace uberon
manual digit 7 plus metapodial segment label manual digit 7 plus metapodial segment
manual digit 7 plus metapodial segment SubClassOf manual digit plus metapodial segment
manual digit 7 plus metapodial segment id UBERON:5011982
manual digit 7 plus metapodial segment has broad synonym manual digit 7 { database cross reference=UBERON:cjm }
manual digit 7 plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
manual digit 7 plus metapodial segment definition A subdivision of the autopod consisting of manual digit 7 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
manual digit 7 plus metapodial segment has broad synonym manual digit 7 ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual digit 7 plus metapodial segment has exact synonym manual digit 7 digitopodial subdivision { database cross reference=UBERON:cjm }

New Class : manual digit 6 plus metapodial segment

manual digit 6 plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
manual digit 6 plus metapodial segment has broad synonym manual digit 6 ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual digit 6 plus metapodial segment SubClassOf manual digit plus metapodial segment
manual digit 6 plus metapodial segment has exact synonym manual digit 6 digitopodial subdivision { database cross reference=UBERON:cjm }
manual digit 6 plus metapodial segment id UBERON:5011981
manual digit 6 plus metapodial segment definition A subdivision of the autopod consisting of manual digit 6 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
manual digit 6 plus metapodial segment has broad synonym manual digit 6 { database cross reference=UBERON:cjm }
manual digit 6 plus metapodial segment label manual digit 6 plus metapodial segment
manual digit 6 plus metapodial segment has obo namespace uberon
manual digit 6 plus metapodial segment has exact synonym manual digit 6 ray { database cross reference=UBERON:cjm }

New Class : pedal digit 6 plus metapodial segment

pedal digit 6 plus metapodial segment has broad synonym pedal digit 6 { database cross reference=UBERON:cjm }
pedal digit 6 plus metapodial segment definition A subdivision of the autopod consisting of pedal digit 6 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
pedal digit 6 plus metapodial segment label pedal digit 6 plus metapodial segment
pedal digit 6 plus metapodial segment has broad synonym pedal digit 6 ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
pedal digit 6 plus metapodial segment has exact synonym pedal digit 6 ray { database cross reference=UBERON:cjm }
pedal digit 6 plus metapodial segment id UBERON:5011984
pedal digit 6 plus metapodial segment SubClassOf pedal digit plus metapodial segment
pedal digit 6 plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
pedal digit 6 plus metapodial segment has obo namespace uberon
pedal digit 6 plus metapodial segment has exact synonym pedal digit 6 digitopodial subdivision { database cross reference=UBERON:cjm }

New Class : manual digit 8 plus metapodial segment

manual digit 8 plus metapodial segment has broad synonym manual digit 8 { database cross reference=UBERON:cjm }
manual digit 8 plus metapodial segment SubClassOf manual digit plus metapodial segment
manual digit 8 plus metapodial segment label manual digit 8 plus metapodial segment
manual digit 8 plus metapodial segment definition A subdivision of the autopod consisting of manual digit 8 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
manual digit 8 plus metapodial segment has exact synonym manual digit 8 ray { database cross reference=UBERON:cjm }
manual digit 8 plus metapodial segment has broad synonym manual digit 8 ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual digit 8 plus metapodial segment id UBERON:5011983
manual digit 8 plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
manual digit 8 plus metapodial segment has obo namespace uberon
manual digit 8 plus metapodial segment has exact synonym manual digit 8 digitopodial subdivision { database cross reference=UBERON:cjm }

New Class : pedal digit 6 digitopodial skeleton

pedal digit 6 digitopodial skeleton label pedal digit 6 digitopodial skeleton
pedal digit 6 digitopodial skeleton SubClassOf subdivision of some pedal digit 6 plus metapodial segment
pedal digit 6 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of pedal digit 6 plus the associated metapodial element. { database cross reference=UBERON:cjm }
pedal digit 6 digitopodial skeleton has related synonym pedal digit 6 skeleton { database cross reference=UBERON:cjm }
pedal digit 6 digitopodial skeleton id UBERON:5111984
pedal digit 6 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some pedal digit 6 plus metapodial segment
pedal digit 6 digitopodial skeleton has related synonym pedal digit 6 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
pedal digit 6 digitopodial skeleton SubClassOf pedal digit digitopodial skeleton
pedal digit 6 digitopodial skeleton has obo namespace uberon
pedal digit 6 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
pedal digit 6 digitopodial skeleton SubClassOf part of some pedal digit 6 plus metapodial segment
pedal digit 6 digitopodial skeleton SubClassOf part of some skeleton of digitopodium

New Class : manual digit 6 digitopodial skeleton

manual digit 6 digitopodial skeleton SubClassOf subdivision of some manual digit 6 plus metapodial segment
manual digit 6 digitopodial skeleton SubClassOf part of some skeleton of digitopodium
manual digit 6 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
manual digit 6 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some manual digit 6 plus metapodial segment
manual digit 6 digitopodial skeleton SubClassOf part of some manual digit 6 plus metapodial segment
manual digit 6 digitopodial skeleton label manual digit 6 digitopodial skeleton
manual digit 6 digitopodial skeleton has obo namespace uberon
manual digit 6 digitopodial skeleton id UBERON:5111981
manual digit 6 digitopodial skeleton has related synonym manual digit 6 skeleton { database cross reference=UBERON:cjm }
manual digit 6 digitopodial skeleton has related synonym manual digit 6 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual digit 6 digitopodial skeleton SubClassOf manual digit digitopodial skeleton
manual digit 6 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 6 plus the associated metapodial element. { database cross reference=UBERON:cjm }

New Class : manual digit 8 digitopodial skeleton

manual digit 8 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 8 plus the associated metapodial element. { database cross reference=UBERON:cjm }
manual digit 8 digitopodial skeleton has obo namespace uberon
manual digit 8 digitopodial skeleton id UBERON:5111983
manual digit 8 digitopodial skeleton has related synonym manual digit 8 skeleton { database cross reference=UBERON:cjm }
manual digit 8 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
manual digit 8 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some manual digit 8 plus metapodial segment
manual digit 8 digitopodial skeleton SubClassOf part of some manual digit 8 plus metapodial segment
manual digit 8 digitopodial skeleton SubClassOf part of some skeleton of digitopodium
manual digit 8 digitopodial skeleton SubClassOf manual digit digitopodial skeleton
manual digit 8 digitopodial skeleton SubClassOf subdivision of some manual digit 8 plus metapodial segment
manual digit 8 digitopodial skeleton has related synonym manual digit 8 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual digit 8 digitopodial skeleton label manual digit 8 digitopodial skeleton

New Class : manual digit 7 digitopodial skeleton

manual digit 7 digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit 7 plus the associated metapodial element. { database cross reference=UBERON:cjm }
manual digit 7 digitopodial skeleton id UBERON:5111982
manual digit 7 digitopodial skeleton has related synonym manual digit 7 skeleton { database cross reference=UBERON:cjm }
manual digit 7 digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
manual digit 7 digitopodial skeleton SubClassOf part of some skeleton of digitopodium
manual digit 7 digitopodial skeleton has related synonym manual digit 7 { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual digit 7 digitopodial skeleton has obo namespace uberon
manual digit 7 digitopodial skeleton SubClassOf manual digit digitopodial skeleton
manual digit 7 digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some manual digit 7 plus metapodial segment
manual digit 7 digitopodial skeleton SubClassOf subdivision of some manual digit 7 plus metapodial segment
manual digit 7 digitopodial skeleton label manual digit 7 digitopodial skeleton
manual digit 7 digitopodial skeleton SubClassOf part of some manual digit 7 plus metapodial segment

New Class : alular digit plus metapodial segment

alular digit plus metapodial segment definition A subdivision of the autopod consisting of alular digit plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
alular digit plus metapodial segment label alular digit plus metapodial segment
alular digit plus metapodial segment has broad synonym alular digit { database cross reference=UBERON:cjm }
alular digit plus metapodial segment has exact synonym alular digit ray { database cross reference=UBERON:cjm }
alular digit plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
alular digit plus metapodial segment SubClassOf manual digit plus metapodial segment
alular digit plus metapodial segment has obo namespace uberon
alular digit plus metapodial segment has broad synonym alular digit ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
alular digit plus metapodial segment has exact synonym alular digit digitopodial subdivision { database cross reference=UBERON:cjm }
alular digit plus metapodial segment id UBERON:5012260

New Class : manual minor digit (Aves) plus metapodial segment

manual minor digit (Aves) plus metapodial segment definition A subdivision of the autopod consisting of manual minor digit (Aves) plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
manual minor digit (Aves) plus metapodial segment has exact synonym manual minor digit (Aves) ray { database cross reference=UBERON:cjm }
manual minor digit (Aves) plus metapodial segment label manual minor digit (Aves) plus metapodial segment
manual minor digit (Aves) plus metapodial segment has broad synonym manual minor digit (Aves) { database cross reference=UBERON:cjm }
manual minor digit (Aves) plus metapodial segment has exact synonym manual minor digit (Aves) digitopodial subdivision { database cross reference=UBERON:cjm }
manual minor digit (Aves) plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
manual minor digit (Aves) plus metapodial segment id UBERON:5012262
manual minor digit (Aves) plus metapodial segment has obo namespace uberon
manual minor digit (Aves) plus metapodial segment SubClassOf manual digit plus metapodial segment
manual minor digit (Aves) plus metapodial segment has broad synonym manual minor digit (Aves) ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }

New Class : manual major digit (Aves) plus metapodial segment

manual major digit (Aves) plus metapodial segment has exact synonym manual major digit (Aves) digitopodial subdivision { database cross reference=UBERON:cjm }
manual major digit (Aves) plus metapodial segment SubClassOf manual digit plus metapodial segment
manual major digit (Aves) plus metapodial segment has exact synonym manual major digit (Aves) ray { database cross reference=UBERON:cjm }
manual major digit (Aves) plus metapodial segment label manual major digit (Aves) plus metapodial segment
manual major digit (Aves) plus metapodial segment has broad synonym manual major digit (Aves) ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual major digit (Aves) plus metapodial segment definition A subdivision of the autopod consisting of manual major digit (Aves) plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
manual major digit (Aves) plus metapodial segment has broad synonym manual major digit (Aves) { database cross reference=UBERON:cjm }
manual major digit (Aves) plus metapodial segment has obo namespace uberon
manual major digit (Aves) plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
manual major digit (Aves) plus metapodial segment id UBERON:5012261

New Class : digit plus metapodial segment

digit plus metapodial segment has exact synonym digit digitopodial subdivision { database cross reference=UBERON:cjm }
digit plus metapodial segment SubClassOf organism subdivision
digit plus metapodial segment has exact synonym digit ray { database cross reference=UBERON:cjm }
digit plus metapodial segment SubClassOf part of some digitopodium region
digit plus metapodial segment has broad synonym digit ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
digit plus metapodial segment definition A subdivision of the autopod consisting of digit plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
digit plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
digit plus metapodial segment has broad synonym digit { database cross reference=UBERON:cjm }
digit plus metapodial segment label digit plus metapodial segment
digit plus metapodial segment has obo namespace uberon
digit plus metapodial segment id UBERON:5002544

New Class : pedal digit 7 plus metapodial segment

pedal digit 7 plus metapodial segment has broad synonym pedal digit 7 { database cross reference=UBERON:cjm }
pedal digit 7 plus metapodial segment has exact synonym pedal digit 7 digitopodial subdivision { database cross reference=UBERON:cjm }
pedal digit 7 plus metapodial segment SubClassOf pedal digit plus metapodial segment
pedal digit 7 plus metapodial segment label pedal digit 7 plus metapodial segment
pedal digit 7 plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
pedal digit 7 plus metapodial segment id UBERON:5012137
pedal digit 7 plus metapodial segment has broad synonym pedal digit 7 ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
pedal digit 7 plus metapodial segment definition A subdivision of the autopod consisting of pedal digit 7 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
pedal digit 7 plus metapodial segment has exact synonym pedal digit 7 ray { database cross reference=UBERON:cjm }
pedal digit 7 plus metapodial segment has obo namespace uberon

New Class : pedal digit 8 plus metapodial segment

pedal digit 8 plus metapodial segment id UBERON:5012138
pedal digit 8 plus metapodial segment has broad synonym pedal digit 8 { database cross reference=UBERON:cjm }
pedal digit 8 plus metapodial segment has exact synonym pedal digit 8 ray { database cross reference=UBERON:cjm }
pedal digit 8 plus metapodial segment has obo namespace uberon
pedal digit 8 plus metapodial segment has broad synonym pedal digit 8 ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
pedal digit 8 plus metapodial segment has exact synonym pedal digit 8 digitopodial subdivision { database cross reference=UBERON:cjm }
pedal digit 8 plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
pedal digit 8 plus metapodial segment label pedal digit 8 plus metapodial segment
pedal digit 8 plus metapodial segment definition A subdivision of the autopod consisting of pedal digit 8 plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
pedal digit 8 plus metapodial segment SubClassOf pedal digit plus metapodial segment

New Class : manual digit plus metapodial segment

manual digit plus metapodial segment has exact synonym manual digit ray { database cross reference=UBERON:cjm }
manual digit plus metapodial segment SubClassOf part of some forelimb
manual digit plus metapodial segment has obo namespace uberon
manual digit plus metapodial segment has exact synonym manual digit digitopodial subdivision { database cross reference=UBERON:cjm }
manual digit plus metapodial segment label manual digit plus metapodial segment
manual digit plus metapodial segment comment This class represents a series of phalanges plus a metapodial element plus associated soft tissues. Instances of this class typically do not form a distinct unit.
manual digit plus metapodial segment definition A subdivision of the autopod consisting of manual digit plus the region incorporating a single metapodial element. These segments are typically repeated along the pre-axiom to post-axial axis. { database cross reference=UBERON:cjm }
manual digit plus metapodial segment EquivalentTo digit plus metapodial segment and part of some forelimb
manual digit plus metapodial segment has broad synonym manual digit { database cross reference=UBERON:cjm }
manual digit plus metapodial segment id UBERON:5002389
manual digit plus metapodial segment has broad synonym manual digit ( phalanges plus metapodial) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual digit plus metapodial segment SubClassOf digit plus metapodial segment

New Class : manual digit digitopodial skeleton

manual digit digitopodial skeleton definition A subdivision of the skeleton of the autopod consisting of the phalanges of manual digit plus the associated metapodial element. { database cross reference=UBERON:cjm }
manual digit digitopodial skeleton has obo namespace uberon
manual digit digitopodial skeleton SubClassOf subdivision of some manual digit plus metapodial segment
manual digit digitopodial skeleton id UBERON:5102389
manual digit digitopodial skeleton SubClassOf part of some manual digit plus metapodial segment
manual digit digitopodial skeleton has related synonym manual digit skeleton { database cross reference=UBERON:cjm }
manual digit digitopodial skeleton EquivalentTo subdivision of skeleton and subdivision of some manual digit plus metapodial segment
manual digit digitopodial skeleton comment This class represents a series of phalanges plus a metapodial element. In comparative anatomy terminology we would call this a “digit”, but the label “digit” is sometimes used to exclude metapodials and to include soft tissue. This series of elements is hypothesized to be homologous to radials.
manual digit digitopodial skeleton SubClassOf part of some skeleton of digitopodium
manual digit digitopodial skeleton has related synonym manual digit { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }
manual digit digitopodial skeleton SubClassOf digit digitopodial skeleton
manual digit digitopodial skeleton label manual digit digitopodial skeleton

Changed Class objects: 159

Changes for: jaw depressor muscle

Deleted
- - jaw depressor muscle definition A muscle whose action is to depress the lower jaw. { database cross reference=http://dx.doi.org//10.1006/bijl.2000.0436 }
- - jaw depressor muscle has narrow synonym branchiomandibularis { database cross reference=http://dx.doi.org//10.1006/bijl.2000.0436 , has synonym type=taxonomic disambiguation }
- - jaw depressor muscle has narrow synonym coracomandibularis { database cross reference=http://dx.doi.org//10.1006/bijl.2000.0436 , has synonym type=taxonomic disambiguation }
- - jaw depressor muscle has narrow synonym depressor gnathalis { database cross reference=http://dx.doi.org//10.1006/bijl.2000.0436 , has synonym type=taxonomic disambiguation }
- - jaw depressor muscle has narrow synonym geniohyoideus muscle { database cross reference=http://dx.doi.org//10.1006/bijl.2000.0436 , has synonym type=taxonomic disambiguation }
- - jaw depressor muscle has narrow synonym geniohyoideus { database cross reference=http://dx.doi.org//10.1006/bijl.2000.0436 , database cross reference=TAO:0000612 , has synonym type=taxonomic disambiguation }
- - jaw depressor muscle has narrow synonym geniothoracis { database cross reference=http://dx.doi.org//10.1006/bijl.2000.0436 , has synonym type=taxonomic disambiguation }
- - jaw depressor muscle has narrow synonym protractor hyoideus { database cross reference=http://dx.doi.org//10.1006/bijl.2000.0436 , has synonym type=taxonomic disambiguation }
Added
- + jaw depressor muscle definition A muscle whose action is to depress the lower jaw. { database cross reference=http://dx.doi.org/10.1006/bijl.2000.0436 }
- + jaw depressor muscle has narrow synonym branchiomandibularis { database cross reference=http://dx.doi.org/10.1006/bijl.2000.0436 , has synonym type=taxonomic disambiguation }
- + jaw depressor muscle has narrow synonym coracomandibularis { database cross reference=http://dx.doi.org/10.1006/bijl.2000.0436 , has synonym type=taxonomic disambiguation }
- + jaw depressor muscle has narrow synonym depressor gnathalis { database cross reference=http://dx.doi.org/10.1006/bijl.2000.0436 , has synonym type=taxonomic disambiguation }
- + jaw depressor muscle has narrow synonym geniohyoideus muscle { database cross reference=http://dx.doi.org/10.1006/bijl.2000.0436 , has synonym type=taxonomic disambiguation }
- + jaw depressor muscle has narrow synonym geniohyoideus { database cross reference=http://dx.doi.org/10.1006/bijl.2000.0436 , database cross reference=TAO:0000612 , has synonym type=taxonomic disambiguation }
- + jaw depressor muscle has narrow synonym geniothoracis { database cross reference=http://dx.doi.org/10.1006/bijl.2000.0436 , has synonym type=taxonomic disambiguation }
- + jaw depressor muscle has narrow synonym protractor hyoideus { database cross reference=http://dx.doi.org/10.1006/bijl.2000.0436 , has synonym type=taxonomic disambiguation }

Changes for: substantia nigra pars reticulata

Deleted
- - substantia nigra pars reticulata comment This class was created automatically from a combination of ontologies
Added
- + substantia nigra pars reticulata comment the cells of pars reticulata bear a strong structural and functional resemblance to the inner segment of the globus pallidus
- + substantia nigra pars reticulata has broad synonym SNPR { database cross reference=MP:0000836 , has synonym type=abbreviation }

Changes for: thyroid follicle epithelium

Deleted
- - thyroid follicle epithelium present in taxon http://purl.obolibrary.org/obo/NCBITaxon_7955 { notes=As in mammals, the thyroid follicles of the zebrafish are usually round to oval, with low cuboidal epithelium. In contrast to mammals, the follicles are not concentrated together but are diffusely distributed along the ventral aorta. , source=http://dx.doi.org//10.1177/0192623311409597 }
Added
- + thyroid follicle epithelium present in taxon http://purl.obolibrary.org/obo/NCBITaxon_7955 { notes=As in mammals, the thyroid follicles of the zebrafish are usually round to oval, with low cuboidal epithelium. In contrast to mammals, the follicles are not concentrated together but are diffusely distributed along the ventral aorta. , source=http://dx.doi.org/10.1177/0192623311409597 }

Changes for: tunica fibrosa of eyeball

Changes for: infundibular organ

Deleted
- - infundibular organ present in taxon http://purl.obolibrary.org/obo/NCBITaxon_7737 { source=http://dx.doi.org//10.1111/j.1463-6395.1976 , stage=larval }
Added
- + infundibular organ present in taxon http://purl.obolibrary.org/obo/NCBITaxon_7737 { source=http://dx.doi.org/10.1111/j.1463-6395.1976 , stage=larval }

Changes for: uvea

Deleted
- - uvea present in taxon http://purl.obolibrary.org/obo/NCBITaxon_7955 { source=http://dx.doi.org//10.1177/0192623311409597 }
Added
- + uvea present in taxon http://purl.obolibrary.org/obo/NCBITaxon_7955 { source=http://dx.doi.org/10.1177/0192623311409597 }

Changes for: stapes bone

Deleted
- - stapes bone definition The stapes or stirrup is the stirrup-shaped small bone or ossicle in the middle ear which is attached to the incus laterally and to the fenestra ovalis, the ‘oval window’ medially. The oval window is adjacent to the vestibule of the inner ear. The stapes is the smallest and lightest bone in the human body. The stapes transmits the sound vibrations from the incus to the membrane of the inner ear inside the fenestra ovalis. The stapes is also stabilized by the stapedius muscle, which is innervated by the facial nerve. In non-mammalian vertebrates, the bone homologous to the stapes is usually called the columella; however, in reptiles, either term may be used[WP,unvetted]. { database cross reference=http://dx.doi.org//10.1111/j.1469-7580.2005.00441.x , database cross reference=http://en.wikipedia.org/wiki/Stapes }
Added
- + stapes bone definition The stapes or stirrup is the stirrup-shaped small bone or ossicle in the middle ear which is attached to the incus laterally and to the fenestra ovalis, the ‘oval window’ medially. The oval window is adjacent to the vestibule of the inner ear. The stapes is the smallest and lightest bone in the human body. The stapes transmits the sound vibrations from the incus to the membrane of the inner ear inside the fenestra ovalis. The stapes is also stabilized by the stapedius muscle, which is innervated by the facial nerve. In non-mammalian vertebrates, the bone homologous to the stapes is usually called the columella; however, in reptiles, either term may be used[WP,unvetted]. { database cross reference=http://dx.doi.org/10.1111/j.1469-7580.2005.00441.x , database cross reference=http://en.wikipedia.org/wiki/Stapes }

Changes for: nasal fin

Deleted
- - nasal fin definition The nasal fin is an epithelial seam that develops by fusion between the epithelial linings of the medial and lateral nasal swellings. Shortly after its formation the nasal fin regresses and is replaced by mesenchyme, with exception of its most posterior portion which remains as the bucconasal membrane. { database cross reference=DOI:10.1002/aja.1001500308 }
Added
- + nasal fin definition The nasal fin is an epithelial seam that develops by fusion between the epithelial linings of the medial and lateral nasal swellings. Shortly after its formation the nasal fin regresses and is replaced by mesenchyme, with exception of its most posterior portion which remains as the bucconasal membrane. { database cross reference=http://dx.doi.org/10.1002/aja.1001500308 }

Changes for: pedal digit 8

Added
- + pedal digit 8 SubClassOf part of some pedal digit 8 plus metapodial segment

Changes for: pedal digit 7

Added
- + pedal digit 7 SubClassOf part of some pedal digit 7 plus metapodial segment

Changes for: prehallux

Deleted
- - prehallux SubClassOf lower limb segment

Changes for: digit

Deleted
- - digit comment [Evolution]. AO notes: EMAPA mapping from TH](todo homology ZFA:0001588-pectoral fin distal radial. Note: This term is a GAT in FMA. Note: we elect to place a strict taxon constraint on this class - this is controversial, and may be weakened later on - see [Wikipedia:Digit_(anatomy)#Evolution]. AO notes: EMAPA mapping from TH)
- - digit database cross reference FMA:85518
- - digit definition one of several most distal parts of a limb, such as fingers or toes, present in many vertebrates[WP]. { database cross reference=http://en.wikipedia.org/wiki/Digit_(anatomy) }
Added
- + digit SubClassOf part of some digit plus metapodial segment
- + digit comment Usage notes: this class represents the entire organism subdivision encompassing soft tissue as well as the underlying skeletal framework. The class represents the phalangeal part only - historically the term ‘digit’ has also been used to represent the unit consisting of a series of phalanges together with a metapodial bone. We may in future relabel this class to avoid confusion with this concept, but the class will continue to represent the phalangeal portion
- + digit database cross reference FMA:85518 { notes=GAT }
- + digit definition A subdivision of the autopod that has as part a series of phalanges together with associated vasculature, musculature, integument and nerves. It is continuous with the metapodial subdivision of the autopod, but does not include the metapodials. In species such as humans, fully formed digits are distinct, whereas in other species the digits may be connected by interdigital webbing, or may be completely unseparated (for example, in cetaceans). { database cross reference=https://github.com/obophenotype/uberon/issues/420 , database cross reference=UBERON:cjm }
- + digit has exact synonym digit (phalangeal portion) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }

Changes for: distal phalanx of digit 2

Added
- + distal phalanx of digit 2 SubClassOf part of some digit 2 digitopodial skeleton

Changes for: distal phalanx of digit 3

Added
- + distal phalanx of digit 3 SubClassOf part of some digit 3 digitopodial skeleton

Changes for: distal phalanx of digit 4

Added
- + distal phalanx of digit 4 SubClassOf part of some digit 4 digitopodial skeleton

Changes for: distal phalanx of digit 5

Added
- + distal phalanx of digit 5 SubClassOf part of some digit 5 digitopodial skeleton

Changes for: middle phalanx of digit 2

Added
- + middle phalanx of digit 2 SubClassOf part of some digit 2 digitopodial skeleton

Changes for: middle phalanx of digit 3

Added
- + middle phalanx of digit 3 SubClassOf part of some digit 3 digitopodial skeleton

Changes for: phalanx of pes

Added
- + phalanx of pes SubClassOf part of some pedal digit digitopodial skeleton

Changes for: distal phalanx of digit 1

Added
- + distal phalanx of digit 1 SubClassOf part of some digit 1 digitopodial skeleton

Changes for: phalanx of manus

Added
- + phalanx of manus SubClassOf part of some manual digit digitopodial skeleton

Changes for: middle phalanx of digit 5

Added
- + middle phalanx of digit 5 SubClassOf part of some digit 5 digitopodial skeleton

Changes for: middle phalanx of digit 4

Added
- + middle phalanx of digit 4 SubClassOf part of some digit 4 digitopodial skeleton

Changes for: pedal digit

Deleted
- - pedal digit SubClassOf lower limb segment
- - pedal digit definition A digit that is part of a pes (foot)[https://orcid.org/0000-0002-6601-2165]. { database cross reference=http://en.wikipedia.org/wiki/Toe }
Added
- + pedal digit SubClassOf part of some pedal digit plus metapodial segment
- + pedal digit definition A digit that is part of a pes (foot). { database cross reference=https://orcid.org/0000-0002-6601-2165 }
- + pedal digit has exact synonym pedal digit (phalangeal portion) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }

Changes for: manual digit 1

Added
- + manual digit 1 SubClassOf part of some manual digit 1 plus metapodial segment

Changes for: manual digit 4

Added
- + manual digit 4 SubClassOf part of some manual digit 4 plus metapodial segment

Changes for: manual digit 5

Added
- + manual digit 5 SubClassOf part of some manual digit 5 plus metapodial segment

Changes for: manual digit 3

Added
- + manual digit 3 SubClassOf part of some manual digit 3 plus metapodial segment

Changes for: manual digit 2

Added
- + manual digit 2 SubClassOf part of some manual digit 2 plus metapodial segment

Changes for: manual digit 1 phalanx

Added
- + manual digit 1 phalanx SubClassOf part of some manual digit 1 digitopodial skeleton

Changes for: pedal digit 5

Added
- + pedal digit 5 SubClassOf part of some pedal digit 5 plus metapodial segment

Changes for: manual digit 2 phalanx

Added
- + manual digit 2 phalanx SubClassOf part of some manual digit 2 digitopodial skeleton

Changes for: manual digit 3 phalanx

Added
- + manual digit 3 phalanx SubClassOf part of some manual digit 3 digitopodial skeleton

Changes for: manual digit 4 phalanx

Added
- + manual digit 4 phalanx SubClassOf part of some manual digit 4 digitopodial skeleton

Changes for: manual digit 5 phalanx

Added
- + manual digit 5 phalanx SubClassOf part of some manual digit 5 digitopodial skeleton

Changes for: pedal digit 2

Added
- + pedal digit 2 SubClassOf part of some pedal digit 2 plus metapodial segment

Changes for: pedal digit 1

Added
- + pedal digit 1 SubClassOf part of some pedal digit 1 plus metapodial segment

Changes for: pedal digit 4

Added
- + pedal digit 4 SubClassOf part of some pedal digit 4 plus metapodial segment

Changes for: pedal digit 3

Added
- + pedal digit 3 SubClassOf part of some pedal digit 3 plus metapodial segment

Changes for: neurohypophyseal duct

Deleted
- - neurohypophyseal duct definition Embryonic duct that is the rudiment of cerebral ganglion and and neural gland of adult in the ascidians. { database cross reference=DOI:10.1002/jez.b.21013 }
Added
- + neurohypophyseal duct definition Embryonic duct that is the rudiment of cerebral ganglion and and neural gland of adult in the ascidians. { database cross reference=http://dx.doi.org/10.1002/jez.b.21013 }

Changes for: coronal organ

Deleted
- - coronal organ definition Mechanoreceptor organ found in oral siphon of botryllid ascidians, made of hair cells, similar to the vertebrate octavolateralis system. A possible candidate of the vertebrate lateral line. { database cross reference=DOI:10.1002/jez.b.21013 }
Added
- + coronal organ definition Mechanoreceptor organ found in oral siphon of botryllid ascidians, made of hair cells, similar to the vertebrate octavolateralis system. A possible candidate of the vertebrate lateral line. { database cross reference=http://dx.doi.org/10.1002/jez.b.21013 }

Changes for: cupular organ

Deleted
- - cupular organ definition Epithelial sense organ containing the cupula housing a gelatinous material elongated from the basement of the organ toward the atrial cavity. The basement of the cupular organ consists of two cell types: sensory cells and support cell { database cross reference=DOI:10.2108/zsj.27.842 }
Added
- + cupular organ definition Epithelial sense organ containing the cupula housing a gelatinous material elongated from the basement of the organ toward the atrial cavity. The basement of the cupular organ consists of two cell types: sensory cells and support cell { database cross reference=http://dx.doi.org/10.2108/zsj.27.842 }

Changes for: pedal digit 3 phalanx

Added
- + pedal digit 3 phalanx SubClassOf part of some pedal digit 3 digitopodial skeleton

Changes for: pedal digit 1 phalanx

Added
- + pedal digit 1 phalanx SubClassOf part of some pedal digit 1 digitopodial skeleton

Changes for: pedal digit 2 phalanx

Added
- + pedal digit 2 phalanx SubClassOf part of some pedal digit 2 digitopodial skeleton

Changes for: neuromere

Deleted
- - neuromere definition A transverse unitary subdivision of the neural tube that shares a common dorsoventral structure (floor, basal, alar, and roof plates), but each having differential molecular identities and fates; they comprise the secondary prosencephalon, diencephalon (prosomeres), the midbrain (mesomeres), and the hindbrain (rhombomeres). { database cross reference=DOI:10.1016/j.tins.2013.06.004 }
Added
- + neuromere definition A transverse unitary subdivision of the neural tube that shares a common dorsoventral structure (floor, basal, alar, and roof plates), but each having differential molecular identities and fates; they comprise the secondary prosencephalon, diencephalon (prosomeres), the midbrain (mesomeres), and the hindbrain (rhombomeres). { database cross reference=http://dx.doi.org/10.1016/j.tins.2013.06.004 }

Changes for: pectoral appendage

Added
- + pectoral appendage has broad synonym anterior appendage

Changes for: manual major digit (Aves)

Added
- + manual major digit (Aves) SubClassOf part of some manual major digit (Aves) plus metapodial segment

Changes for: alular digit

Added
- + alular digit SubClassOf part of some alular digit plus metapodial segment

Changes for: manual minor digit (Aves)

Added
- + manual minor digit (Aves) SubClassOf part of some manual minor digit (Aves) plus metapodial segment

Changes for: pelvic appendage

Added
- + pelvic appendage has broad synonym posterior appendage
- + pelvic appendage has exact synonym posterior limb/fin

Changes for: pedal digit 4 phalanx endochondral element

Added
- + pedal digit 4 phalanx endochondral element SubClassOf part of some pedal digit 4 digitopodial skeleton

Changes for: pedal digit 5 phalanx endochondral element

Added
- + pedal digit 5 phalanx endochondral element SubClassOf part of some pedal digit 5 digitopodial skeleton

Changes for: pedal digit 2 phalanx endochondral element

Added
- + pedal digit 2 phalanx endochondral element SubClassOf part of some pedal digit 2 digitopodial skeleton

Changes for: pedal digit 3 phalanx endochondral element

Added
- + pedal digit 3 phalanx endochondral element SubClassOf part of some pedal digit 3 digitopodial skeleton

Changes for: pedal digit phalanx endochondral element

Added
- + pedal digit phalanx endochondral element SubClassOf part of some pedal digit digitopodial skeleton

Changes for: pedal digit 1 phalanx endochondral element

Added
- + pedal digit 1 phalanx endochondral element SubClassOf part of some pedal digit 1 digitopodial skeleton

Changes for: manual digit phalanx endochondral element

Added
- + manual digit phalanx endochondral element SubClassOf part of some manual digit digitopodial skeleton

Changes for: manual digit 1 phalanx endochondral element

Added
- + manual digit 1 phalanx endochondral element SubClassOf part of some manual digit 1 digitopodial skeleton

Changes for: manual digit 2 phalanx endochondral element

Added
- + manual digit 2 phalanx endochondral element SubClassOf part of some manual digit 2 digitopodial skeleton

Changes for: manual digit 3 phalanx endochondral element

Added
- + manual digit 3 phalanx endochondral element SubClassOf part of some manual digit 3 digitopodial skeleton

Changes for: manual digit 4 phalanx endochondral element

Added
- + manual digit 4 phalanx endochondral element SubClassOf part of some manual digit 4 digitopodial skeleton

Changes for: manual digit 5 phalanx endochondral element

Added
- + manual digit 5 phalanx endochondral element SubClassOf part of some manual digit 5 digitopodial skeleton

Changes for: entotympanic bone

Deleted
- - entotympanic bone definition Entotympanics are independent elements present in the auditory bullae of various eutherians { database cross reference=http://dx.doi.org//10.1023/A:1020538313412 }
Added
- + entotympanic bone definition Entotympanics are independent elements present in the auditory bullae of various eutherians { database cross reference=http://dx.doi.org/10.1023/A:1020538313412 }

Changes for: red pulp of spleen

Deleted
- - red pulp of spleen present in taxon http://purl.obolibrary.org/obo/NCBITaxon_7955 { source=http://dx.doi.org//10.1177/0192623311409597 }
Added
- + red pulp of spleen present in taxon http://purl.obolibrary.org/obo/NCBITaxon_7955 { source=http://dx.doi.org/10.1177/0192623311409597 }

Changes for: pyloric sphincter

Deleted
- - pyloric sphincter homology notes (…) the adult Xenopus stomach exhibits both glandular and aglandular regions and a distinct pyloric sphincter similar to that of the amniotic vertebrates (…).[uncertain][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001466 , ontology=VHOG , source=http://bgee.unil.ch/ , source=DOI:10.1046/j.1525-142x.2000.00076.x }
Added
- + pyloric sphincter homology notes (…) the adult Xenopus stomach exhibits both glandular and aglandular regions and a distinct pyloric sphincter similar to that of the amniotic vertebrates (…).[uncertain][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001466 , ontology=VHOG , source=http://bgee.unil.ch/ , source=http://dx.doi.org/10.1046/j.1525-142x.2000.00076.x }

Changes for: proximal phalanx of manus

Added
- + proximal phalanx of manus SubClassOf part of some manual digit digitopodial skeleton

Changes for: levator cloacae

Deleted
- - levator cloacae definition a long narrow muscle arising from the underside of feather bulge of the lateral rectrices, inserting near the midline of the cloacal tubercle - phallus. { database cross reference=http://dx.doi.org//10.1242/dev.01545 }
- - levator cloacae has exact synonym m. retractor phalli caudalis { database cross reference=http://dx.doi.org//10.1242/dev.01545 }
- - levator cloacae has exact synonym musculus levator cloacae { database cross reference=http://dx.doi.org//10.1242/dev.01545 }
- - levator cloacae has exact synonym musculus retractor phalli caudalis { database cross reference=http://dx.doi.org//10.1242/dev.01545 }
Added
- + levator cloacae definition a long narrow muscle arising from the underside of feather bulge of the lateral rectrices, inserting near the midline of the cloacal tubercle - phallus. { database cross reference=http://dx.doi.org/10.1242/dev.01545 }
- + levator cloacae has exact synonym m. retractor phalli caudalis { database cross reference=http://dx.doi.org/10.1242/dev.01545 }
- + levator cloacae has exact synonym musculus levator cloacae { database cross reference=http://dx.doi.org/10.1242/dev.01545 }
- + levator cloacae has exact synonym musculus retractor phalli caudalis { database cross reference=http://dx.doi.org/10.1242/dev.01545 }

Changes for: transverse cloacal muscle

Deleted
- - transverse cloacal muscle definition a very prominent superficial muscle and with its almost transverse course it forms the boundary between the abdomen and the tail. { database cross reference=http://dx.doi.org//10.1242/dev.01545 }
- - transverse cloacal muscle has exact synonym m. transversus cloacae { database cross reference=http://dx.doi.org//10.1242/dev.01545 }
- - transverse cloacal muscle has exact synonym musculus transversus cloacae { database cross reference=http://dx.doi.org//10.1242/dev.01545 }
Added
- + transverse cloacal muscle definition a very prominent superficial muscle and with its almost transverse course it forms the boundary between the abdomen and the tail. { database cross reference=http://dx.doi.org/10.1242/dev.01545 }
- + transverse cloacal muscle has exact synonym m. transversus cloacae { database cross reference=http://dx.doi.org/10.1242/dev.01545 }
- + transverse cloacal muscle has exact synonym musculus transversus cloacae { database cross reference=http://dx.doi.org/10.1242/dev.01545 }

Changes for: atrioventricular valve

Deleted
- - atrioventricular valve homology notes The conus arteriosus is the most distal part of the primitive fish heart and forms the connection between the ventricle and the ventral aorta. At the sinoatrial, the atrioventricular, and the ventriculoconal junctions, valves developed to prevent backflow of blood during relaxation of the preceding compartment.[uncertain][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001472 , ontology=VHOG , source=http://bgee.unil.ch/ , source=DOI:10.1152/physrev.00006.2003 }
Added
- + atrioventricular valve homology notes The conus arteriosus is the most distal part of the primitive fish heart and forms the connection between the ventricle and the ventral aorta. At the sinoatrial, the atrioventricular, and the ventriculoconal junctions, valves developed to prevent backflow of blood during relaxation of the preceding compartment.[uncertain][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001472 , ontology=VHOG , source=http://bgee.unil.ch/ , source=http://dx.doi.org/10.1152/physrev.00006.2003 }

Changes for: medulla of thymus

Deleted
- - medulla of thymus present in taxon http://purl.obolibrary.org/obo/NCBITaxon_7955 { source=http://dx.doi.org//10.1177/0192623311409597 }
Added
- + medulla of thymus present in taxon http://purl.obolibrary.org/obo/NCBITaxon_7955 { source=http://dx.doi.org/10.1177/0192623311409597 }

Changes for: cortex of thymus

Deleted
- - cortex of thymus present in taxon http://purl.obolibrary.org/obo/NCBITaxon_7955 { source=http://dx.doi.org//10.1177/0192623311409597 }
Added
- + cortex of thymus present in taxon http://purl.obolibrary.org/obo/NCBITaxon_7955 { source=http://dx.doi.org/10.1177/0192623311409597 }

Changes for: anterolateral ligament of knee

Deleted
- - anterolateral ligament of knee definition a ligament on the lateral aspect of the human knee, anterior to the fibular collateral ligament. { database cross reference=http://dx.doi.org//10.1111/joa.12087 , database cross reference=http://en.wikipedia.org/wiki/Anterolateral_ligament }
- - anterolateral ligament of knee has exact synonym (mid-third) lateral capsular ligament { database cross reference=http://dx.doi.org//10.1111/joa.12087 }
- - anterolateral ligament of knee has exact synonym ALL { database cross reference=http://dx.doi.org//10.1111/joa.12087 , has synonym type=abbreviation }
- - anterolateral ligament of knee has exact synonym anterolateral ligament { database cross reference=http://dx.doi.org//10.1111/joa.12087 }
- - anterolateral ligament of knee has exact synonym capsulo-osseous layer of the iliotibial band { database cross reference=http://dx.doi.org//10.1111/joa.12087 }
- - anterolateral ligament of knee has exact synonym ligament of Segond { database cross reference=http://dx.doi.org//10.1111/joa.12087 }
Added
- + anterolateral ligament of knee definition a ligament on the lateral aspect of the human knee, anterior to the fibular collateral ligament. { database cross reference=http://dx.doi.org/10.1111/joa.12087 , database cross reference=http://en.wikipedia.org/wiki/Anterolateral_ligament }
- + anterolateral ligament of knee has exact synonym (mid-third) lateral capsular ligament { database cross reference=http://dx.doi.org/10.1111/joa.12087 }
- + anterolateral ligament of knee has exact synonym ALL { database cross reference=http://dx.doi.org/10.1111/joa.12087 , has synonym type=abbreviation }
- + anterolateral ligament of knee has exact synonym anterolateral ligament { database cross reference=http://dx.doi.org/10.1111/joa.12087 }
- + anterolateral ligament of knee has exact synonym capsulo-osseous layer of the iliotibial band { database cross reference=http://dx.doi.org/10.1111/joa.12087 }
- + anterolateral ligament of knee has exact synonym ligament of Segond { database cross reference=http://dx.doi.org/10.1111/joa.12087 }

Changes for: velar vocal fold

Deleted
- - velar vocal fold definition On of a pair of medial protrusions of the intra-pharyngeal ostium (an oval opening within the soft palate that connects the oral and nasal portions of the pharynx), used in vocalization in Koalas. { database cross reference=http://dx.doi.org//10.1016/j.cub.2013.10.069 }
Added
- + velar vocal fold definition On of a pair of medial protrusions of the intra-pharyngeal ostium (an oval opening within the soft palate that connects the oral and nasal portions of the pharynx), used in vocalization in Koalas. { database cross reference=http://dx.doi.org/10.1016/j.cub.2013.10.069 }

Changes for: ventral pallium

Deleted
- - ventral pallium definition the pallial region located next to the pallium-subpallium boundary. { database cross reference=http://dx.doi.org//10.1371/journal.pone.0044716 }
Added
- + ventral pallium definition the pallial region located next to the pallium-subpallium boundary. { database cross reference=http://dx.doi.org/10.1371/journal.pone.0044716 }

Changes for: bone marrow cavity

Deleted
- - bone marrow cavity dubious for taxon http://purl.obolibrary.org/obo/NCBITaxon_7955 { source=http://dx.doi.org//10.1177/0192623311409597 }
Added
- + bone marrow cavity dubious for taxon http://purl.obolibrary.org/obo/NCBITaxon_7955 { source=http://dx.doi.org/10.1177/0192623311409597 }

Changes for: papillary muscle of heart

Deleted
- - papillary muscle of heart homology notes On the internal or parietal surface of the left ventricle in man and in mammals are two papillary muscles, which are almost identical and well developed.[well established][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001392 , ontology=VHOG , source=http://bgee.unil.ch/ , source=DOI:10.1111/j.1368-5031.2005.00345.x }
Added
- + papillary muscle of heart homology notes On the internal or parietal surface of the left ventricle in man and in mammals are two papillary muscles, which are almost identical and well developed.[well established][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001392 , ontology=VHOG , source=http://bgee.unil.ch/ , source=http://dx.doi.org/10.1111/j.1368-5031.2005.00345.x }

Changes for: amnioserosa

Deleted
- - amnioserosa definition a single extraembryonic epithelium, which closes the germband dorsally. { database cross reference=http://dx.doi.org//10.1073/pnas.0709145105 }
Added
- + amnioserosa definition a single extraembryonic epithelium, which closes the germband dorsally. { database cross reference=http://dx.doi.org/10.1073/pnas.0709145105 }

Changes for: skin gland

Added
- + skin gland database cross reference http://www.snomedbrowser.com/Codes/Details/110485007

Changes for: proximal phalanx of digit 5

Added
- + proximal phalanx of digit 5 SubClassOf part of some digit 5 digitopodial skeleton

Changes for: proximal phalanx of digit 3

Added
- + proximal phalanx of digit 3 SubClassOf part of some digit 3 digitopodial skeleton

Changes for: proximal phalanx of digit 4

Added
- + proximal phalanx of digit 4 SubClassOf part of some digit 4 digitopodial skeleton

Changes for: proximal phalanx of digit 2

Added
- + proximal phalanx of digit 2 SubClassOf part of some digit 2 digitopodial skeleton

Changes for: proximal phalanx of digit 1

Added
- + proximal phalanx of digit 1 SubClassOf part of some digit 1 digitopodial skeleton

Changes for: scleral mesenchyme

Added
- + scleral mesenchyme SubClassOf surrounds some optic cup

Changes for: manual digit

Deleted
- - manual digit SubClassOf upper limb segment
Added
- + manual digit SubClassOf part of some manual digit plus metapodial segment
- + manual digit has exact synonym manual digit (phalangeal portion) plus soft tissue { database cross reference=UBERON:cjm , has synonym type=preferred term in the context of comparative anatomy }

Changes for: exocrine gland

Added
- + exocrine gland database cross reference http://www.snomedbrowser.com/Codes/Details/115976003

Changes for: somite

Deleted
- - somite definition Somites are spheres of epithelial cells that form sequentially along the anterior–posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. { database cross reference=http://dx.doi.org//10.1111/j.1439-0426.2012.01987.x , database cross reference=http://en.wikipedia.org/wiki/Somite }
Added
- + somite definition Somites are spheres of epithelial cells that form sequentially along the anterior–posterior axis of the embryo through mesenchymal to epithelial transition of the presomitic mesoderm. { database cross reference=http://dx.doi.org/10.1111/j.1439-0426.2012.01987.x , database cross reference=http://en.wikipedia.org/wiki/Somite }

Changes for: distal segment of digit

Deleted
- - distal segment of digit definition A segment of a digit containing the distal phalanx, and overlapping the distal interphalangeal joint[CJM]. The digit tip is derived from multiple and distinct embryonic origins, and includes the distal bone with associated marrow cavity and haematopoietic cells, ventral (flexor) and dorsal (extensor) tendons, sweat glands with myoepithelial and luminal secreting cells and associated neurons for innervation, dermis with resident melanocytes and dendritic cells, mesenchyme with resident fibroblasts, skin epidermis with hair follicles, a nail organ composed of six specific parts (the root, nail bed, nail plate, eponychium (cuticle), perionychium and hyponychium). { database cross reference=http://dx.doi.org//10.1038/nature10346 }
Added
- + distal segment of digit definition A segment of a digit containing the distal phalanx, and overlapping the distal interphalangeal joint[CJM]. The digit tip is derived from multiple and distinct embryonic origins, and includes the distal bone with associated marrow cavity and haematopoietic cells, ventral (flexor) and dorsal (extensor) tendons, sweat glands with myoepithelial and luminal secreting cells and associated neurons for innervation, dermis with resident melanocytes and dendritic cells, mesenchyme with resident fibroblasts, skin epidermis with hair follicles, a nail organ composed of six specific parts (the root, nail bed, nail plate, eponychium (cuticle), perionychium and hyponychium). { database cross reference=http://dx.doi.org/10.1038/nature10346 }

Changes for: distal segment of manual digit

Deleted
- - distal segment of manual digit has exact synonym finger digit tip { database cross reference=http://dx.doi.org//10.1038/nature10346 }
- - distal segment of manual digit has exact synonym forelimb digit tip { database cross reference=http://dx.doi.org//10.1038/nature10346 }
Added
- + distal segment of manual digit has exact synonym finger digit tip { database cross reference=http://dx.doi.org/10.1038/nature10346 }
- + distal segment of manual digit has exact synonym forelimb digit tip { database cross reference=http://dx.doi.org/10.1038/nature10346 }

Changes for: distal segment of pedal digit

Deleted
- - distal segment of pedal digit has exact synonym hindlimb digit tip { database cross reference=http://dx.doi.org//10.1038/nature10346 }
- - distal segment of pedal digit has exact synonym toe digit tip { database cross reference=http://dx.doi.org//10.1038/nature10346 }
Added
- + distal segment of pedal digit has exact synonym hindlimb digit tip { database cross reference=http://dx.doi.org/10.1038/nature10346 }
- + distal segment of pedal digit has exact synonym toe digit tip { database cross reference=http://dx.doi.org/10.1038/nature10346 }

Changes for: middle phalanx of manus

Added
- + middle phalanx of manus SubClassOf part of some manual digit digitopodial skeleton

Changes for: distal phalanx of manus

Added
- + distal phalanx of manus SubClassOf part of some manual digit digitopodial skeleton

Changes for: pedal digit 4 phalanx

Added
- + pedal digit 4 phalanx SubClassOf part of some pedal digit 4 digitopodial skeleton

Changes for: pedal digit 5 phalanx

Added
- + pedal digit 5 phalanx SubClassOf part of some pedal digit 5 digitopodial skeleton

Changes for: proximal phalanx of pes

Added
- + proximal phalanx of pes SubClassOf part of some pedal digit digitopodial skeleton

Changes for: distal phalanx of pes

Added
- + distal phalanx of pes SubClassOf part of some pedal digit digitopodial skeleton

Changes for: middle phalanx of pes

Added
- + middle phalanx of pes SubClassOf part of some pedal digit digitopodial skeleton

Changes for: embryonic intraretinal space

Added
- + embryonic intraretinal space definition The space separating the outer pigment epithelium and the inner neural retina of the optic cup and of the retina { database cross reference=VHOG:0000534 }
- + embryonic intraretinal space has exact synonym intraretinal space of optic cup { database cross reference=EMAPA:16676 }

Changes for: stapes pre-cartilage condensation

Deleted
- - stapes pre-cartilage condensation has exact synonym stapedial anlage { database cross reference=http://dx.doi.org//10.1111/j.1469-7580.2005.00441.x }
Added
- + stapes pre-cartilage condensation has exact synonym stapedial anlage { database cross reference=http://dx.doi.org/10.1111/j.1469-7580.2005.00441.x }

Changes for: head kidney

Deleted
- - head kidney definition The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. { database cross reference=http://dx.doi.org//10.1242/dev.00427 , database cross reference=ZFIN:ZDB-PUB-040923-1 }
Added
- + head kidney definition The zebrafish head kidney consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis. { database cross reference=http://dx.doi.org/10.1242/dev.00427 , database cross reference=ZFIN:ZDB-PUB-040923-1 }

Changes for: pedal digit bone

Added
- + pedal digit bone SubClassOf part of some pedal digit digitopodial skeleton

Changes for: manual digit bone

Added
- + manual digit bone SubClassOf part of some manual digit digitopodial skeleton

Changes for: cardiac ventricle

Added
- + cardiac ventricle SubClassOf immediate transformation of some future cardiac ventricle

Changes for: phalanx

Added
- + phalanx SubClassOf part of some digit digitopodial skeleton

Changes for: proximal phalanx of manual digit 3

Added
- + proximal phalanx of manual digit 3 SubClassOf part of some manual digit 3 digitopodial skeleton

Changes for: proximal phalanx of manual digit 2

Added
- + proximal phalanx of manual digit 2 SubClassOf part of some manual digit 2 digitopodial skeleton

Changes for: middle phalanx of pedal digit 2

Added
- + middle phalanx of pedal digit 2 SubClassOf part of some pedal digit 2 digitopodial skeleton

Changes for: middle phalanx of pedal digit 3

Added
- + middle phalanx of pedal digit 3 SubClassOf part of some pedal digit 3 digitopodial skeleton

Changes for: middle phalanx of pedal digit 4

Added
- + middle phalanx of pedal digit 4 SubClassOf part of some pedal digit 4 digitopodial skeleton

Changes for: middle phalanx of pedal digit 5

Added
- + middle phalanx of pedal digit 5 SubClassOf part of some pedal digit 5 digitopodial skeleton

Changes for: middle phalanx of manual digit 2

Added
- + middle phalanx of manual digit 2 SubClassOf part of some manual digit 2 digitopodial skeleton

Changes for: middle phalanx of manual digit 3

Added
- + middle phalanx of manual digit 3 SubClassOf part of some manual digit 3 digitopodial skeleton

Changes for: middle phalanx of manual digit 4

Added
- + middle phalanx of manual digit 4 SubClassOf part of some manual digit 4 digitopodial skeleton

Changes for: middle phalanx of manual digit 5

Added
- + middle phalanx of manual digit 5 SubClassOf part of some manual digit 5 digitopodial skeleton

Changes for: distal phalanx of pedal digit 5

Added
- + distal phalanx of pedal digit 5 SubClassOf part of some pedal digit 5 digitopodial skeleton

Changes for: distal phalanx of pedal digit 4

Added
- + distal phalanx of pedal digit 4 SubClassOf part of some pedal digit 4 digitopodial skeleton

Changes for: distal phalanx of pedal digit 3

Added
- + distal phalanx of pedal digit 3 SubClassOf part of some pedal digit 3 digitopodial skeleton

Changes for: distal phalanx of pedal digit 1

Added
- + distal phalanx of pedal digit 1 SubClassOf part of some pedal digit 1 digitopodial skeleton

Changes for: distal phalanx of pedal digit 2

Added
- + distal phalanx of pedal digit 2 SubClassOf part of some pedal digit 2 digitopodial skeleton

Changes for: distal phalanx of manual digit 4

Added
- + distal phalanx of manual digit 4 SubClassOf part of some manual digit 4 digitopodial skeleton

Changes for: distal phalanx of manual digit 5

Added
- + distal phalanx of manual digit 5 SubClassOf part of some manual digit 5 digitopodial skeleton

Changes for: distal phalanx of manual digit 2

Added
- + distal phalanx of manual digit 2 SubClassOf part of some manual digit 2 digitopodial skeleton

Changes for: distal phalanx of manual digit 3

Added
- + distal phalanx of manual digit 3 SubClassOf part of some manual digit 3 digitopodial skeleton

Changes for: proximal phalanx of pedal digit 3

Added
- + proximal phalanx of pedal digit 3 SubClassOf part of some pedal digit 3 digitopodial skeleton

Changes for: proximal phalanx of pedal digit 2

Added
- + proximal phalanx of pedal digit 2 SubClassOf part of some pedal digit 2 digitopodial skeleton

Changes for: proximal phalanx of pedal digit 1

Added
- + proximal phalanx of pedal digit 1 SubClassOf part of some pedal digit 1 digitopodial skeleton

Changes for: proximal phalanx of manual digit 5

Added
- + proximal phalanx of manual digit 5 SubClassOf part of some manual digit 5 digitopodial skeleton

Changes for: proximal phalanx of manual digit 1

Added
- + proximal phalanx of manual digit 1 SubClassOf part of some manual digit 1 digitopodial skeleton

Changes for: distal phalanx of manual digit 1

Added
- + distal phalanx of manual digit 1 SubClassOf part of some manual digit 1 digitopodial skeleton

Changes for: proximal phalanx of pedal digit 5

Added
- + proximal phalanx of pedal digit 5 SubClassOf part of some pedal digit 5 digitopodial skeleton

Changes for: proximal phalanx of pedal digit 4

Added
- + proximal phalanx of pedal digit 4 SubClassOf part of some pedal digit 4 digitopodial skeleton

Changes for: proximal phalanx of manual digit 4

Added
- + proximal phalanx of manual digit 4 SubClassOf part of some manual digit 4 digitopodial skeleton

Changes for: Reichert’s membrane

Deleted
- - Reichert’s membrane definition An nonvascular extraembryonic basement membrane that forms on the inner surface of the trophectoderm during placenta morphogenesis and is secreted by the distal parietal endoderm; required for the maternofetal exchange of nutrients and is important for the postgastrulation development[MP]. a thick multilayered basement membrane between the parietal endoderm cells and the trophoblast cells { database cross reference=DOI:10.1007/BF00184752 , database cross reference=MP:0003954 }
Added
- + Reichert’s membrane definition An nonvascular extraembryonic basement membrane that forms on the inner surface of the trophectoderm during placenta morphogenesis and is secreted by the distal parietal endoderm; required for the maternofetal exchange of nutrients and is important for the postgastrulation development[MP]. a thick multilayered basement membrane between the parietal endoderm cells and the trophoblast cells { database cross reference=http://dx.doi.org/10.1007/BF00184752 , database cross reference=MP:0003954 }

Changes for: Reichert’s cartilage

Deleted
- - Reichert’s cartilage definition a continuous cartilaginous formation in mesenchyme of the second pharyngeal arch in the embryo. The longer cranial or styloid segment is continuous with the otic capsule; its inferior end is angulated and is situated very close to the oropharynx. The smaller caudal segment is in contact with the body and greater horn of the hyoid cartilaginous structure { database cross reference=http://dx.doi.org//10.1111/j.1469-7580.2006.00524.x , database cross reference=MP:0004916 }
Added
- + Reichert’s cartilage definition a continuous cartilaginous formation in mesenchyme of the second pharyngeal arch in the embryo. The longer cranial or styloid segment is continuous with the otic capsule; its inferior end is angulated and is situated very close to the oropharynx. The smaller caudal segment is in contact with the body and greater horn of the hyoid cartilaginous structure { database cross reference=http://dx.doi.org/10.1111/j.1469-7580.2006.00524.x , database cross reference=MP:0004916 }

Changes for: blood brain barrier

Deleted
- - blood brain barrier definition Cell layer consisting of lining cells that separates the central nervous system and the bloodstream. The BBB may consist of endothelial cells or glial cells. An endothelial barrier may have arisen independently several times during evolution. In bichir and lungfish the barrier is formed by brain endothelial cells, while in sturgeon it is formed by a complex perivascular glial sheath, but with no detectable tight junctions. { database cross reference=http://en.wikipedia.org/wiki/Blood-brain_barrier , database cross reference=DOI:10.1002/glia.20642 }
Added
- + blood brain barrier definition Cell layer consisting of lining cells that separates the central nervous system and the bloodstream. The BBB may consist of endothelial cells or glial cells. An endothelial barrier may have arisen independently several times during evolution. In bichir and lungfish the barrier is formed by brain endothelial cells, while in sturgeon it is formed by a complex perivascular glial sheath, but with no detectable tight junctions. { database cross reference=http://dx.doi.org/10.1002/glia.20642 , database cross reference=http://en.wikipedia.org/wiki/Blood-brain_barrier }

Changes for: pecten oculi

Added
- + pecten oculi SubClassOf develops from some ventral part of optic cup
- + pecten oculi comment ventral optic cup derivative
- + pecten oculi depicted by https://upload.wikimedia.org/wikipedia/commons/thumb/b/b7/Birdeye.jpg/700px-Birdeye.jpg
- + pecten oculi has broad synonym pecten

Changes for: digit 1

Added
- + digit 1 SubClassOf part of some digit 1 plus metapodial segment

Changes for: digit 2

Added
- + digit 2 SubClassOf part of some digit 2 plus metapodial segment

Changes for: digit 5

Added
- + digit 5 SubClassOf part of some digit 5 plus metapodial segment

Changes for: digit 3

Added
- + digit 3 SubClassOf part of some digit 3 plus metapodial segment

Changes for: digit 4

Added
- + digit 4 SubClassOf part of some digit 4 plus metapodial segment

Changes for: pinhole eye

Deleted
- - pinhole eye definition Simple eye that has a small aperture (which may be adjustable) and deep pit. It is only found in the nautiloids. { database cross reference=http://en.wikipedia.org/wiki/Pinhole_eye , database cross reference=DOI:10.1146/annurev.ne.15.030192.000245 }
Added
- + pinhole eye definition Simple eye that has a small aperture (which may be adjustable) and deep pit. It is only found in the nautiloids. { database cross reference=http://dx.doi.org/10.1146/annurev.ne.15.030192.000245 , database cross reference=http://en.wikipedia.org/wiki/Pinhole_eye }

Changes for: cardiac neural crest

Deleted
- - cardiac neural crest external definition A subpopulation of the cephalic neural crest that emerges from the otic level to the anterior limit of somite 4. It migrates to the heart and is essential for the septation of the outflow track[doi:10.1242/dev.091751]. { source=http://dx.doi.org//10.1242/dev.091751 }
Added
- + cardiac neural crest external definition A subpopulation of the cephalic neural crest that emerges from the otic level to the anterior limit of somite 4. It migrates to the heart and is essential for the septation of the outflow track[doi:10.1242/dev.091751]. { source=http://dx.doi.org/10.1242/dev.091751 }

Changes for: limb outgrowth

Deleted
- - limb outgrowth SubClassOf limb segment
Added
- + limb outgrowth SubClassOf organism subdivision

Changes for: prepollex

Deleted
- - prepollex SubClassOf upper limb segment
- - prepollex has related synonym pseudothumb { database cross reference=http://dx.doi.org//10.1098/rsbl.2009.1038 }
Added
- + prepollex has related synonym pseudothumb { database cross reference=http://dx.doi.org/10.1098/rsbl.2009.1038 }

Changes for: organism subdivision

Added
- + organism subdivision SubClassOf has part some part of some circulatory system
- + organism subdivision SubClassOf has part some part of some integumental system
- + organism subdivision SubClassOf has part some part of some musculature
- + organism subdivision SubClassOf has part some part of some nervous system
- + organism subdivision SubClassOf has part some part of some skeletal system

Changes for: central tendon of diaphragm

Deleted
- - central tendon of diaphragm homology notes In mammals, the diaphragm muscle divides the thoracoabdominal cavity into thorax and abdomen. In most mammals, the diaphragm is a flat sheet with muscle fibers radiating outward from a central tendon, and the diaphragm’s apposition to the cranial surface of the liver gives it a dome-shape. Muscle fiber contraction reduces the curvature of the dome, thereby expanding the thoracic cavity and aspirating air into the lungs.[well established][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001399 , ontology=VHOG , source=http://bgee.unil.ch/ , source=DOI:10.1016/j.resp.2006.06.003 }
Added
- + central tendon of diaphragm homology notes In mammals, the diaphragm muscle divides the thoracoabdominal cavity into thorax and abdomen. In most mammals, the diaphragm is a flat sheet with muscle fibers radiating outward from a central tendon, and the diaphragm’s apposition to the cranial surface of the liver gives it a dome-shape. Muscle fiber contraction reduces the curvature of the dome, thereby expanding the thoracic cavity and aspirating air into the lungs.[well established][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001399 , ontology=VHOG , source=http://bgee.unil.ch/ , source=http://dx.doi.org/10.1016/j.resp.2006.06.003 }

Changes for: pectoral appendage apical ectodermal ridge

Deleted
- - pectoral appendage apical ectodermal ridge homology notes Pectoral and pelvic fins are homologous to the tetrapod fore and hindlimb, respectively. (…) The zebrafish AER [apical ectodermal ridge] is an apical ectodermal thickening at the distal tip of the fin bud and consists of wedge-shaped cells of the basal stratum. The AER is observed only transiently, and from 36 hpf onwards the cells of this region form the apical fold (AF), which consists of a dorsal and a ventral layer of cylindrically-shaped ectodermal cells extending from the anterior to the posterior fin margin. Despite the change in shape, the AF still carries out the same functions as the AER. Indeed, although the AER receives its name from its characteristic shape, being composed of a pseudostratified ectoderm in the chicken and a polystratified ectoderm in the mouse, this independence of AER morphology from its function is also observed in tetrapods. The AF also expresses similar molecular markers to the tetrapod AER, suggesting that it fulfills similar functions in the fin as the AER does in tetrapod limbs.[well established][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001064 , ontology=VHOG , source=http://bgee.unil.ch/ , source=DOI:10.1111/j.1440-169X.2007.00942.x }
Added
- + pectoral appendage apical ectodermal ridge homology notes Pectoral and pelvic fins are homologous to the tetrapod fore and hindlimb, respectively. (…) The zebrafish AER [apical ectodermal ridge] is an apical ectodermal thickening at the distal tip of the fin bud and consists of wedge-shaped cells of the basal stratum. The AER is observed only transiently, and from 36 hpf onwards the cells of this region form the apical fold (AF), which consists of a dorsal and a ventral layer of cylindrically-shaped ectodermal cells extending from the anterior to the posterior fin margin. Despite the change in shape, the AF still carries out the same functions as the AER. Indeed, although the AER receives its name from its characteristic shape, being composed of a pseudostratified ectoderm in the chicken and a polystratified ectoderm in the mouse, this independence of AER morphology from its function is also observed in tetrapods. The AF also expresses similar molecular markers to the tetrapod AER, suggesting that it fulfills similar functions in the fin as the AER does in tetrapod limbs.[well established][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001064 , ontology=VHOG , source=http://bgee.unil.ch/ , source=http://dx.doi.org/10.1111/j.1440-169X.2007.00942.x }

Changes for: pelvic appendage apical ectodermal ridge

Deleted
- - pelvic appendage apical ectodermal ridge homology notes Pectoral and pelvic fins are homologous to the tetrapod fore and hindlimb, respectively. (…) The zebrafish AER [apical ectodermal ridge] is an apical ectodermal thickening at the distal tip of the fin bud and consists of wedge-shaped cells of the basal stratum. The AER is observed only transiently, and from 36 hpf onwards the cells of this region form the apical fold (AF), which consists of a dorsal and a ventral layer of cylindrically-shaped ectodermal cells extending from the anterior to the posterior fin margin. Despite the change in shape, the AF still carries out the same functions as the AER. Indeed, although the AER receives its name from its characteristic shape, being composed of a pseudostratified ectoderm in the chicken and a polystratified ectoderm in the mouse, this independence of AER morphology from its function is also observed in tetrapods. The AF also expresses similar molecular markers to the tetrapod AER, suggesting that it fulfills similar functions in the fin as the AER does in tetrapod limbs.[well established][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001066 , ontology=VHOG , source=http://bgee.unil.ch/ , source=DOI:10.1111/j.1440-169X.2007.00942.x }
Added
- + pelvic appendage apical ectodermal ridge homology notes Pectoral and pelvic fins are homologous to the tetrapod fore and hindlimb, respectively. (…) The zebrafish AER [apical ectodermal ridge] is an apical ectodermal thickening at the distal tip of the fin bud and consists of wedge-shaped cells of the basal stratum. The AER is observed only transiently, and from 36 hpf onwards the cells of this region form the apical fold (AF), which consists of a dorsal and a ventral layer of cylindrically-shaped ectodermal cells extending from the anterior to the posterior fin margin. Despite the change in shape, the AF still carries out the same functions as the AER. Indeed, although the AER receives its name from its characteristic shape, being composed of a pseudostratified ectoderm in the chicken and a polystratified ectoderm in the mouse, this independence of AER morphology from its function is also observed in tetrapods. The AF also expresses similar molecular markers to the tetrapod AER, suggesting that it fulfills similar functions in the fin as the AER does in tetrapod limbs.[well established][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001066 , ontology=VHOG , source=http://bgee.unil.ch/ , source=http://dx.doi.org/10.1111/j.1440-169X.2007.00942.x }

Changes for: optic fissure

Deleted
- - optic fissure SubClassOf part of some optic cup
Added
- + optic fissure SubClassOf part of some ventral part of optic cup

Changes for: interrenal gland

Deleted
- - interrenal gland definition Structures in fishes homologous to the cortical tissue of the mammalian adrenal gland; they are in close proximity to or imbedded in the head kidney. { database cross reference=http://dx.doi.org//10.1242/dev.00427 , database cross reference=BTO:0000808 }
Added
- + interrenal gland definition Structures in fishes homologous to the cortical tissue of the mammalian adrenal gland; they are in close proximity to or imbedded in the head kidney. { database cross reference=http://dx.doi.org/10.1242/dev.00427 , database cross reference=BTO:0000808 }

Changes for: pedal digit 6

Added
- + pedal digit 6 SubClassOf part of some pedal digit 6 plus metapodial segment

Changes for: manual digit 8

Added
- + manual digit 8 SubClassOf part of some manual digit 8 plus metapodial segment

Changes for: manual digit 7

Added
- + manual digit 7 SubClassOf part of some manual digit 7 plus metapodial segment

Changes for: manual digit 6

Added
- + manual digit 6 SubClassOf part of some manual digit 6 plus metapodial segment

Changes for: anterior commissure

Deleted
- - anterior commissure homology notes In all vertebrates the thin structure that connects the two halves of the telencephalon shows a ridge-like thickening at the basal side known as the anterior commissure.[well established][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001558 , ontology=VHOG , source=http://bgee.unil.ch/ , source=DOI:10.1111/j.1749-6632.1969.tb20432.x }
Added
- + anterior commissure homology notes In all vertebrates the thin structure that connects the two halves of the telencephalon shows a ridge-like thickening at the basal side known as the anterior commissure.[well established][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0001558 , ontology=VHOG , source=http://bgee.unil.ch/ , source=http://dx.doi.org/10.1111/j.1749-6632.1969.tb20432.x }

Changes for: median lingual swelling

Deleted
- - median lingual swelling homology notes Most adult amphibians have a tongue, as do all known reptiles, birds and mammals. Thus it is likely that the tongue appeared with the establishment of tetrapods and this structure seems to be related, to some extant, to the terrestrial lifestyle.[well established][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0000730 , ontology=VHOG , source=http://bgee.unil.ch/ , source=DOI:10.1046/j.1469-7580.2002.00073.x }
Added
- + median lingual swelling homology notes Most adult amphibians have a tongue, as do all known reptiles, birds and mammals. Thus it is likely that the tongue appeared with the establishment of tetrapods and this structure seems to be related, to some extant, to the terrestrial lifestyle.[well established][VHOG] { date retrieved=2012-09-17 , external class=VHOG:0000730 , ontology=VHOG , source=http://bgee.unil.ch/ , source=http://dx.doi.org/10.1046/j.1469-7580.2002.00073.x }

Changes for: kidney interstitium

Deleted
- - kidney interstitium definition The interstitium of the kidney comprises the extravascular intertubular spaces of the renal parenchyma, with their attendant cellular elements and extracellular substances. As we define it here, the interstitium is bounded on all sides by tubular and vascular basement membranes. { database cross reference=http://dx.doi.org//10.1038/ki.1991.49 }
Added
- + kidney interstitium definition The interstitium of the kidney comprises the extravascular intertubular spaces of the renal parenchyma, with their attendant cellular elements and extracellular substances. As we define it here, the interstitium is bounded on all sides by tubular and vascular basement membranes. { database cross reference=http://dx.doi.org/10.1038/ki.1991.49 }

2014-05-03 release

Ontology Diff Report

Original Ontology

New Ontology

Report for classes

Class objects lost from source: 0

Class objects new in target: 58

New Class : digit 3 digitopodial skeleton

New Class : digit 4 digitopodial skeleton

New Class : digit 5 digitopodial skeleton

New Class : digit 2 digitopodial skeleton

New Class : digit 1 digitopodial skeleton

New Class : manual digit 5 plus metapodial segment

New Class : manual digit 4 plus metapodial segment

New Class : manual digit 3 plus metapodial segment

New Class : manual digit 2 plus metapodial segment

New Class : pedal digit 5 plus metapodial segment

New Class : pedal digit 4 plus metapodial segment

New Class : pedal digit 1 plus metapodial segment

New Class : pedal digit 3 plus metapodial segment

New Class : pedal digit 2 plus metapodial segment

New Class : pedal digit plus metapodial segment

New Class : manual digit 1 plus metapodial segment

New Class : manual minor digit (Aves) digitopodial skeleton

New Class : manual major digit (Aves) digitopodial skeleton

New Class : alular digit digitopodial skeleton

New Class : pedal digit 7 digitopodial skeleton

New Class : pedal digit 8 digitopodial skeleton

New Class : ventral part of optic cup

New Class : interdigital gland

New Class : dorsal part of optic cup

New Class : skin scent gland

New Class : digit 1 plus metapodial segment

New Class : digit 2 plus metapodial segment

New Class : digit 3 plus metapodial segment

New Class : digit 5 plus metapodial segment

New Class : digit 4 plus metapodial segment

New Class : digit digitopodial skeleton

New Class : pedal digit digitopodial skeleton

New Class : manual digit 1 digitopodial skeleton

New Class : manual digit 5 digitopodial skeleton

New Class : manual digit 4 digitopodial skeleton

New Class : manual digit 3 digitopodial skeleton

New Class : manual digit 2 digitopodial skeleton

New Class : pedal digit 4 digitopodial skeleton

New Class : pedal digit 3 digitopodial skeleton

New Class : pedal digit 2 digitopodial skeleton

New Class : pedal digit 1 digitopodial skeleton

New Class : pedal digit 5 digitopodial skeleton

New Class : manual digit 7 plus metapodial segment

New Class : manual digit 6 plus metapodial segment

New Class : pedal digit 6 plus metapodial segment

New Class : manual digit 8 plus metapodial segment

New Class : pedal digit 6 digitopodial skeleton

New Class : manual digit 6 digitopodial skeleton

New Class : manual digit 8 digitopodial skeleton

New Class : manual digit 7 digitopodial skeleton

New Class : alular digit plus metapodial segment

New Class : manual minor digit (Aves) plus metapodial segment

New Class : manual major digit (Aves) plus metapodial segment

New Class : digit plus metapodial segment

New Class : pedal digit 7 plus metapodial segment

New Class : pedal digit 8 plus metapodial segment

New Class : manual digit plus metapodial segment

New Class : manual digit digitopodial skeleton

Changed Class objects: 159

Changes for: jaw depressor muscle

Changes for: substantia nigra pars reticulata

Changes for: thyroid follicle epithelium

Changes for: tunica fibrosa of eyeball

Changes for: infundibular organ

Changes for: uvea

Changes for: stapes bone

Changes for: nasal fin

Changes for: pedal digit 8

Changes for: pedal digit 7

Changes for: prehallux

Changes for: digit

Changes for: distal phalanx of digit 2

Changes for: distal phalanx of digit 3