bug fix release

• added xref for EHDAA2 extraembryonic component. Bgee:AN. Fixes issue #502
• minor changes to align with GO
• Fixed obsolete xref for frog adult stage. Bgee:AN. Fixes issue #499
• NTs for zones of medial entorhinal cortex.

Ontology Diff Report

Original Ontology

• IRI: http://purl.obolibrary.org/obo/uberon.owl
• VersionIRI: http://purl.obolibrary.org/obo/uberon/releases/2014-07-01/uberon.owl

New Ontology

• IRI: http://purl.obolibrary.org/obo/uberon.owl
• VersionIRI: http://purl.obolibrary.org/obo/uberon/releases/2014-07-06/uberon.owl

Report for classes

Class objects lost from source: 0

Class objects new in target: 0

Changed Class objects: 19

Changes for: blood plasma

• Deleted
  • - blood plasma has exact synonym plasma
  • - blood plasma has exact synonym portion of plasma
• Added
  • + blood plasma has broad synonym plasma { database cross reference=MA:0002501 }
  • + blood plasma has broad synonym portion of plasma { database cross reference=FMA:62970 }
  • + blood plasma has exact synonym blood plasm

Changes for: subdivision of digestive tract

• Added
  • + subdivision of digestive tract has related synonym intestinal tract
  • + subdivision of digestive tract has related synonym segment of intestinal tract

Changes for: extra-ocular muscle

• Added
  • + extra-ocular muscle comment Development notes: Myofibers in extraocular muscles are derived from mesoderm, whereas muscle connective tissue cells arise from neural crest.[PMID:16638982]

Changes for: head paraxial mesoderm

• Added
  • + head paraxial mesoderm has related synonym somitomere
  • + head paraxial mesoderm has related synonym somitomeric mesoderm

Changes for: dentary

• Added
  • + dentary SubClassOf in lateral side of some skeleton of lower jaw
  • + dentary SubClassOf lateral structure

Changes for: mushroom body

• Deleted
  • - mushroom body SubClassOf ganglion of central nervous system
• Added
  • + mushroom body SubClassOf anatomical group
  • + mushroom body SubClassOf ectoderm-derived structure

Changes for: anatomical point connecting sagittal and lambdoidal sutures

• Deleted
  • - lambda label lambda
• Added
  • + anatomical point connecting sagittal and lambdoidal sutures EquivalentTo anatomical point and connects some lambdoid suture and connects some sagittal suture
  • + anatomical point connecting sagittal and lambdoidal sutures SubClassOf connects some lambdoid suture
  • + anatomical point connecting sagittal and lambdoidal sutures SubClassOf connects some sagittal suture
  • + anatomical point connecting sagittal and lambdoidal sutures has related synonym posterior fontanelle { database cross reference=http://en.wikipedia.org/wiki/Lambda_(anatomy) }
  • + anatomical point connecting sagittal and lambdoidal sutures label anatomical point connecting sagittal and lambdoidal sutures

Changes for: embryonic cement gland

• Deleted
  • - cement gland label cement gland
• Added
  • + embryonic cement gland has broad synonym cement gland { database cross reference=XAO:0000033 }
  • + embryonic cement gland label embryonic cement gland

Changes for: somitomeric trunk muscle

• Deleted
  • - somitomeric trunk muscle SubClassOf skeletal muscle tissue
• Added
  • + somitomeric trunk muscle SubClassOf part of some trunk
  • + somitomeric trunk muscle SubClassOf skeletal muscle of trunk
  • + somitomeric trunk muscle comment issuecomment-48075274

Changes for: hair follicle

• Deleted
  • - hair follicle SubClassOf tube
• Added
  • + hair follicle SubClassOf organ part

Changes for: post-juvenile adult stage

• Deleted
  • - post-juvenile adult stage database cross reference XAO:1000009
• Added
  • + post-juvenile adult stage database cross reference XAO:1000093

Changes for: intestine

• Added
  • + intestine has related synonym intestinal tract

Changes for: entire extraembryonic component

• Added
  • + entire extraembryonic component database cross reference EHDAA2:0000003

Changes for: presomitic mesoderm

• Added
  • + presomitic mesoderm has related synonym somitomeric mesoderm { database cross reference=GO:0002075 }

Changes for: male reproductive system

• Added
  • + male reproductive system has related synonym male genital tract

Changes for: obsolete somitomere

• Added
  • + obsolete somitomere consider UBERON:0009617

Changes for: female reproductive system

• Added
  • + female reproductive system has related synonym female genital tract

Changes for: obsolete head mesoderm

• Deleted
  • - obsolete head mesoderm has exact synonym cranial mesoderm
• Added
  • + obsolete head mesoderm has related synonym cranial mesoderm

Changes for: reproductive system

• Added
  • + reproductive system has related synonym genital tract
  • + reproductive system has related synonym reproductive tract

Report for properties

ObjectProperty objects lost from source: 0

ObjectProperty objects new in target: 0

Changed ObjectProperty objects: 0

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